RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 RNASEH2BQ5TBB1 312 aaKnown RBP12.69□□□□□ -0.38
SYNGAP1-207ENST00000628646 CRIPAKQ8N1N5 446 aa12.69□□□□□ -0.38
SYNGAP1-207ENST00000628646 RAB6CQ9H0N0 254 aa12.69□□□□□ -0.38
SYNGAP1-207ENST00000628646 ABCB8Q9NUT2 735 aa12.69□□□□□ -0.38
SYNGAP1-207ENST00000628646 KLHL14Q9P2G3 628 aa12.69□□□□□ -0.38
SYNGAP1-207ENST00000628646 AGO1Q9UL18 857 aaKnown RBP12.69□□□□□ -0.38
SYNGAP1-207ENST00000628646 CAPN7Q9Y6W3 813 aa12.69□□□□□ -0.38
SYNGAP1-207ENST00000628646 IQANK1A0A1B0GTG1 560 aa12.68□□□□□ -0.38
SYNGAP1-207ENST00000628646 SPAG6O75602 509 aa12.68□□□□□ -0.38
SYNGAP1-207ENST00000628646 ASGR2P07307 311 aa12.68□□□□□ -0.38
SYNGAP1-207ENST00000628646 ABHD2P08910 425 aa12.68□□□□□ -0.38
SYNGAP1-207ENST00000628646 SEC13P55735 322 aa12.68□□□□□ -0.38
SYNGAP1-207ENST00000628646 PDIA2Q13087 525 aaKnown RBP12.68□□□□□ -0.38
SYNGAP1-207ENST00000628646 PDGFRLQ15198 375 aa12.68□□□□□ -0.38
SYNGAP1-207ENST00000628646 ACBD5Q5T8D3 534 aaPredicted RBP12.68□□□□□ -0.38
SYNGAP1-207ENST00000628646 NPAS3Q8IXF0 933 aa12.68□□□□□ -0.38
SYNGAP1-207ENST00000628646 PPIL6Q8IXY8 311 aa12.68□□□□□ -0.38
SYNGAP1-207ENST00000628646 EXOC2Q96KP1 924 aa12.68□□□□□ -0.38
SYNGAP1-207ENST00000628646 HAPLN3Q96S86 360 aa12.68□□□□□ -0.38
SYNGAP1-207ENST00000628646 TTLL2Q9BWV7 592 aa12.68□□□□□ -0.38
SYNGAP1-207ENST00000628646 LINC00597Q9H2U6 94 aa12.68□□□□□ -0.38
SYNGAP1-207ENST00000628646 KDM4CQ9H3R0 1056 aa12.68□□□□□ -0.38
SYNGAP1-207ENST00000628646 OSER1Q9NX31 292 aa12.68□□□□□ -0.38
SYNGAP1-207ENST00000628646 SLC12A4Q9UP95 1085 aa12.68□□□□□ -0.38
SYNGAP1-207ENST00000628646 KNL1Q8NG31 2342 aa12.68□□□□□ -0.38
SYNGAP1-207ENST00000628646 E2F8A0AVK6 867 aa12.68□□□□□ -0.38
SYNGAP1-207ENST00000628646 TMEM120BA0PK00 339 aa12.68□□□□□ -0.38
SYNGAP1-207ENST00000628646 TYRP14679 529 aa12.68□□□□□ -0.38
SYNGAP1-207ENST00000628646 RHOQP17081 205 aa12.68□□□□□ -0.38
SYNGAP1-207ENST00000628646 TRNP1Q6NT89 227 aa12.68□□□□□ -0.38
SYNGAP1-207ENST00000628646 CHST9Q7L1S5 443 aa12.68□□□□□ -0.38
SYNGAP1-207ENST00000628646 SUGP1Q8IWZ8 645 aaKnown RBP12.68□□□□□ -0.38
SYNGAP1-207ENST00000628646 GDAP1Q8TB36 358 aa12.68□□□□□ -0.38
SYNGAP1-207ENST00000628646 UBP1Q9NZI7 540 aa12.68□□□□□ -0.38
SYNGAP1-207ENST00000628646 HHLA1C9JL84 531 aa12.68□□□□□ -0.38
SYNGAP1-207ENST00000628646 NCAM2O15394 837 aa12.68□□□□□ -0.38
SYNGAP1-207ENST00000628646 TGM2P21980 687 aa12.68□□□□□ -0.38
SYNGAP1-207ENST00000628646 MTM1Q13496 603 aa12.68□□□□□ -0.38
SYNGAP1-207ENST00000628646 C2orf27AQ580R0 203 aa12.68□□□□□ -0.38
SYNGAP1-207ENST00000628646 FAM78AQ5JUQ0 283 aa12.68□□□□□ -0.38
SYNGAP1-207ENST00000628646 LINGO4Q6UY18 593 aa12.68□□□□□ -0.38
SYNGAP1-207ENST00000628646 THEGQ9P2T0 379 aa12.68□□□□□ -0.38
SYNGAP1-207ENST00000628646 ARHGAP26Q9UNA1 814 aa12.68□□□□□ -0.38
SYNGAP1-207ENST00000628646 DNAH12Q6ZR08 3092 aa12.68□□□□□ -0.38
SYNGAP1-207ENST00000628646 RASA4BC9J798 803 aa12.68□□□□□ -0.38
SYNGAP1-207ENST00000628646 KPNA3O00505 521 aaPredicted RBP12.68□□□□□ -0.38
SYNGAP1-207ENST00000628646 RASA4O43374 803 aa12.68□□□□□ -0.38
SYNGAP1-207ENST00000628646 ITGAVP06756 1048 aa12.68□□□□□ -0.38
SYNGAP1-207ENST00000628646 BRAFP15056 766 aa12.68□□□□□ -0.38
SYNGAP1-207ENST00000628646 SCTRP47872 440 aa12.68□□□□□ -0.38
SYNGAP1-207ENST00000628646 GDF10P55107 478 aa12.68□□□□□ -0.38
SYNGAP1-207ENST00000628646 ITIH4Q14624 930 aa12.68□□□□□ -0.38
SYNGAP1-207ENST00000628646 ITPRIPL2Q3MIP1 535 aa12.68□□□□□ -0.38
SYNGAP1-207ENST00000628646 POM121L1PQ3SYA9 428 aa12.68□□□□□ -0.38
SYNGAP1-207ENST00000628646 MS4A13Q5J8X5 152 aa12.68□□□□□ -0.38
SYNGAP1-207ENST00000628646 SLC25A41Q8N5S1 370 aa12.68□□□□□ -0.38
SYNGAP1-207ENST00000628646 NTAN1Q96AB6 310 aa12.68□□□□□ -0.38
SYNGAP1-207ENST00000628646 RPL10LQ96L21 214 aaKnown RBP12.68□□□□□ -0.38
SYNGAP1-207ENST00000628646 C9orf72Q96LT7 481 aa12.68□□□□□ -0.38
SYNGAP1-207ENST00000628646 POMKQ9H5K3 350 aa12.68□□□□□ -0.38
SYNGAP1-207ENST00000628646 PRKAG3Q9UGI9 489 aa12.68□□□□□ -0.38
SYNGAP1-207ENST00000628646 SHOC2Q9UQ13 582 aa12.68□□□□□ -0.38
SYNGAP1-207ENST00000628646 MT-ND3P03897 115 aa12.67□□□□□ -0.38
SYNGAP1-207ENST00000628646 TROVE2P10155 538 aaKnown RBP eCLIP12.67□□□□□ -0.38
SYNGAP1-207ENST00000628646 RENBPP51606 427 aa12.67□□□□□ -0.38
SYNGAP1-207ENST00000628646 CDH4P55283 916 aa12.67□□□□□ -0.38
SYNGAP1-207ENST00000628646 ADAM15Q13444 863 aa12.67□□□□□ -0.38
SYNGAP1-207ENST00000628646 TRIM42Q8IWZ5 723 aa12.67□□□□□ -0.38
SYNGAP1-207ENST00000628646 LRRC8CQ8TDW0 803 aa12.67□□□□□ -0.38
SYNGAP1-207ENST00000628646 MYRFLQ96LU7 910 aa12.67□□□□□ -0.38
SYNGAP1-207ENST00000628646 TTYH1Q9H313 450 aaPredicted RBP12.67□□□□□ -0.38
SYNGAP1-207ENST00000628646 PRDM16Q9HAZ2 1276 aa12.67□□□□□ -0.38
SYNGAP1-207ENST00000628646 SNX3O60493 162 aa12.67□□□□□ -0.38
SYNGAP1-207ENST00000628646 ZBTB16Q05516 673 aa12.67□□□□□ -0.38
SYNGAP1-207ENST00000628646 DPYSL3Q14195 570 aa12.67□□□□□ -0.38
SYNGAP1-207ENST00000628646 SLC5A9Q2M3M2 681 aa12.67□□□□□ -0.38
SYNGAP1-207ENST00000628646 LIMS2Q7Z4I7 341 aa12.67□□□□□ -0.38
SYNGAP1-207ENST00000628646 ZBED8Q8IZ13 594 aa12.67□□□□□ -0.38
SYNGAP1-207ENST00000628646 GRIN3AQ8TCU5 1115 aa12.67□□□□□ -0.38
SYNGAP1-207ENST00000628646 DENND1AQ8TEH3 1009 aa12.67□□□□□ -0.38
SYNGAP1-207ENST00000628646 CKAP2Q8WWK9 683 aa12.67□□□□□ -0.38
SYNGAP1-207ENST00000628646 USP13Q92995 863 aaPredicted RBP12.67□□□□□ -0.38
SYNGAP1-207ENST00000628646 LGMNQ99538 433 aa12.67□□□□□ -0.38
SYNGAP1-207ENST00000628646 ACTR5Q9H9F9 607 aaPredicted RBP12.67□□□□□ -0.38
SYNGAP1-207ENST00000628646 TBK1Q9UHD2 729 aa12.67□□□□□ -0.38
SYNGAP1-207ENST00000628646 CCDC78A2IDD5 438 aa12.67□□□□□ -0.38
SYNGAP1-207ENST00000628646 APOC4-APOC2K7ER74 178 aa12.67□□□□□ -0.38
SYNGAP1-207ENST00000628646 PRAMEF12O95522 483 aa12.67□□□□□ -0.38
SYNGAP1-207ENST00000628646 APOC2P02655 101 aa12.67□□□□□ -0.38
SYNGAP1-207ENST00000628646 PECAM1P16284 738 aaPredicted RBP12.67□□□□□ -0.38
SYNGAP1-207ENST00000628646 PFKPQ01813 784 aa12.67□□□□□ -0.38
SYNGAP1-207ENST00000628646 GBE1Q04446 702 aa12.67□□□□□ -0.38
SYNGAP1-207ENST00000628646 SPARCL1Q14515 664 aa12.67□□□□□ -0.38
SYNGAP1-207ENST00000628646 C14orf80Q86SX3 495 aa12.67□□□□□ -0.38
SYNGAP1-207ENST00000628646 PRCCQ92733 491 aaPredicted RBP12.67□□□□□ -0.38
SYNGAP1-207ENST00000628646 SCUBE2Q9NQ36 999 aa12.67□□□□□ -0.38
SYNGAP1-207ENST00000628646 CCL26Q9Y258 94 aa12.67□□□□□ -0.38
SYNGAP1-207ENST00000628646 MRPS17Q9Y2R5 130 aaKnown RBP12.67□□□□□ -0.38
SYNGAP1-207ENST00000628646 GNA12Q03113 381 aa12.66□□□□□ -0.38
SYNGAP1-207ENST00000628646 RING1Q06587 406 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms