RNA–Protein interactions for RNA: ENST00000627738.1

SOX2-OT-244, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 692 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-244ENST00000627738 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.13□□□□□ -0.79
SOX2-OT-244ENST00000627738 A0A1B0GVM2 712 aa10.13□□□□□ -0.79
SOX2-OT-244ENST00000627738 TCAF2A6NFQ2 919 aa10.13□□□□□ -0.79
SOX2-OT-244ENST00000627738 SOBPA7XYQ1 873 aa10.13□□□□□ -0.79
SOX2-OT-244ENST00000627738 E7ESA3 106 aa10.13□□□□□ -0.79
SOX2-OT-244ENST00000627738 J3KR12 359 aa10.13□□□□□ -0.79
SOX2-OT-244ENST00000627738 ZNF197O14709 1029 aa10.13□□□□□ -0.79
SOX2-OT-244ENST00000627738 ALOX15BO15296 676 aa10.13□□□□□ -0.79
SOX2-OT-244ENST00000627738 EIF3HO15372 352 aaKnown RBP eCLIP10.13□□□□□ -0.79
SOX2-OT-244ENST00000627738 TBL1XO60907 577 aa10.13□□□□□ -0.79
SOX2-OT-244ENST00000627738 WFS1O76024 890 aa10.13□□□□□ -0.79
SOX2-OT-244ENST00000627738 ACSL3O95573 720 aa10.13□□□□□ -0.79
SOX2-OT-244ENST00000627738 RHOCP08134 193 aa10.13□□□□□ -0.79
SOX2-OT-244ENST00000627738 CEBPBP17676 345 aa10.13□□□□□ -0.79
SOX2-OT-244ENST00000627738 NFKB1P19838 968 aa10.13□□□□□ -0.79
SOX2-OT-244ENST00000627738 ACVRL1P37023 503 aa10.13□□□□□ -0.79
SOX2-OT-244ENST00000627738 NUMBP49757 651 aa10.13□□□□□ -0.79
SOX2-OT-244ENST00000627738 ATP1A2P50993 1020 aa10.13□□□□□ -0.79
SOX2-OT-244ENST00000627738 YBEYP58557 167 aaPredicted RBP10.13□□□□□ -0.79
SOX2-OT-244ENST00000627738 IFI35P80217 286 aaPredicted RBP10.13□□□□□ -0.79
SOX2-OT-244ENST00000627738 GNA12Q03113 381 aa10.13□□□□□ -0.79
SOX2-OT-244ENST00000627738 GPS2Q13227 327 aa10.13□□□□□ -0.79
SOX2-OT-244ENST00000627738 ZNF177Q13360 481 aaPredicted RBP10.13□□□□□ -0.79
SOX2-OT-244ENST00000627738 MTM1Q13496 603 aa10.13□□□□□ -0.79
SOX2-OT-244ENST00000627738 SERINC3Q13530 473 aa10.13□□□□□ -0.79
SOX2-OT-244ENST00000627738 SLC29A2Q14542 456 aa10.13□□□□□ -0.79
SOX2-OT-244ENST00000627738 FASTKD3Q14CZ7 662 aaKnown RBP10.13□□□□□ -0.79
SOX2-OT-244ENST00000627738 KYNUQ16719 465 aa10.13□□□□□ -0.79
SOX2-OT-244ENST00000627738 BBS9Q3SYG4 887 aa10.13□□□□□ -0.79
SOX2-OT-244ENST00000627738 HP1BP3Q5SSJ5 553 aaPredicted RBP10.13□□□□□ -0.79
SOX2-OT-244ENST00000627738 C6orf118Q5T5N4 469 aa10.13□□□□□ -0.79
SOX2-OT-244ENST00000627738 TTC39BQ5VTQ0 682 aaPredicted RBP10.13□□□□□ -0.79
SOX2-OT-244ENST00000627738 DENND2CQ68D51 928 aa10.13□□□□□ -0.79
SOX2-OT-244ENST00000627738 ITPRIPL1Q6GPH6 555 aa10.13□□□□□ -0.79
SOX2-OT-244ENST00000627738 LRIG3Q6UXM1 1119 aa10.13□□□□□ -0.79
SOX2-OT-244ENST00000627738 TMC5Q6UXY8 1006 aa10.13□□□□□ -0.79
SOX2-OT-244ENST00000627738 PPP1R21Q6ZMI0 780 aa10.13□□□□□ -0.79
SOX2-OT-244ENST00000627738 BBS7Q8IWZ6 715 aa10.13□□□□□ -0.79
SOX2-OT-244ENST00000627738 FAM217AQ8IXS0 508 aa10.13□□□□□ -0.79
SOX2-OT-244ENST00000627738 ZBED8Q8IZ13 594 aa10.13□□□□□ -0.79
SOX2-OT-244ENST00000627738 PDIK1LQ8N165 341 aa10.13□□□□□ -0.79
SOX2-OT-244ENST00000627738 CNTD1Q8N815 330 aa10.13□□□□□ -0.79
SOX2-OT-244ENST00000627738 HJURPQ8NCD3 748 aaPredicted RBP10.13□□□□□ -0.79
SOX2-OT-244ENST00000627738 MCUQ8NE86 351 aa10.13□□□□□ -0.79
SOX2-OT-244ENST00000627738 OR52K2Q8NGK3 314 aa10.13□□□□□ -0.79
SOX2-OT-244ENST00000627738 OR2W6PQ8NHA6 318 aa10.13□□□□□ -0.79
SOX2-OT-244ENST00000627738 UHMK1Q8TAS1 419 aaKnown RBP10.13□□□□□ -0.79
SOX2-OT-244ENST00000627738 SH3RF2Q8TEC5 729 aa10.13□□□□□ -0.79
SOX2-OT-244ENST00000627738 MAML1Q92585 1016 aa10.13□□□□□ -0.79
SOX2-OT-244ENST00000627738 ARHGEF2Q92974 986 aaKnown RBP10.13□□□□□ -0.79
SOX2-OT-244ENST00000627738 USP13Q92995 863 aaPredicted RBP10.13□□□□□ -0.79
SOX2-OT-244ENST00000627738 MRPL38Q96DV4 380 aaKnown RBP10.13□□□□□ -0.79
SOX2-OT-244ENST00000627738 TMA16Q96EY4 203 aaKnown RBP10.13□□□□□ -0.79
SOX2-OT-244ENST00000627738 C9orf72Q96LT7 481 aa10.13□□□□□ -0.79
SOX2-OT-244ENST00000627738 SERPINB12Q96P63 405 aa10.13□□□□□ -0.79
SOX2-OT-244ENST00000627738 CDCA3Q99618 268 aaPredicted RBP10.13□□□□□ -0.79
SOX2-OT-244ENST00000627738 IL12RB2Q99665 862 aa10.13□□□□□ -0.79
SOX2-OT-244ENST00000627738 PHACTR1Q9C0D0 580 aa10.13□□□□□ -0.79
SOX2-OT-244ENST00000627738 GBA3Q9H227 469 aa10.13□□□□□ -0.79
SOX2-OT-244ENST00000627738 SFXN1Q9H9B4 322 aa10.13□□□□□ -0.79
SOX2-OT-244ENST00000627738 DNAAF2Q9NVR5 837 aaKnown RBP10.13□□□□□ -0.79
SOX2-OT-244ENST00000627738 RBM22Q9NW64 420 aaKnown RBP eCLIP10.13□□□□□ -0.79
SOX2-OT-244ENST00000627738 CCL26Q9Y258 94 aa10.13□□□□□ -0.79
SOX2-OT-244ENST00000627738 MRPS23Q9Y3D9 190 aaKnown RBP10.13□□□□□ -0.79
SOX2-OT-244ENST00000627738 CHD7Q9P2D1 2997 aa10.13□□□□□ -0.79
SOX2-OT-244ENST00000627738 A0A0D9SEW6 157 aa10.12□□□□□ -0.79
SOX2-OT-244ENST00000627738 TYW5A2RUC4 315 aaKnown RBP10.12□□□□□ -0.79
SOX2-OT-244ENST00000627738 H3BQF6 201 aa10.12□□□□□ -0.79
SOX2-OT-244ENST00000627738 J3QL48 77 aa10.12□□□□□ -0.79
SOX2-OT-244ENST00000627738 GFRA2O00451 464 aa10.12□□□□□ -0.79
SOX2-OT-244ENST00000627738 AVILO75366 819 aa10.12□□□□□ -0.79
SOX2-OT-244ENST00000627738 NEBLO76041 1014 aa10.12□□□□□ -0.79
SOX2-OT-244ENST00000627738 TTC4O95801 387 aa10.12□□□□□ -0.79
SOX2-OT-244ENST00000627738 SYF2O95926 243 aaKnown RBP10.12□□□□□ -0.79
SOX2-OT-244ENST00000627738 PEX11BO96011 259 aa10.12□□□□□ -0.79
SOX2-OT-244ENST00000627738 HLA-DQB2P05538 268 aa10.12□□□□□ -0.79
SOX2-OT-244ENST00000627738 NUDT17P0C025 328 aa10.12□□□□□ -0.79
SOX2-OT-244ENST00000627738 GRIA1P42261 906 aa10.12□□□□□ -0.79
SOX2-OT-244ENST00000627738 IL10RBQ08334 325 aa10.12□□□□□ -0.79
SOX2-OT-244ENST00000627738 KCNC3Q14003 757 aa10.12□□□□□ -0.79
SOX2-OT-244ENST00000627738 ANO4Q32M45 955 aa10.12□□□□□ -0.79
SOX2-OT-244ENST00000627738 CRTC2Q53ET0 693 aaPredicted RBP10.12□□□□□ -0.79
SOX2-OT-244ENST00000627738 CEP85LQ5SZL2 805 aa10.12□□□□□ -0.79
SOX2-OT-244ENST00000627738 ZNF534Q76KX8 674 aa10.12□□□□□ -0.79
SOX2-OT-244ENST00000627738 OTOP3Q7RTS5 596 aa10.12□□□□□ -0.79
SOX2-OT-244ENST00000627738 SETD3Q86TU7 594 aaPredicted RBP10.12□□□□□ -0.79
SOX2-OT-244ENST00000627738 ANKMY2Q8IV38 441 aa10.12□□□□□ -0.79
SOX2-OT-244ENST00000627738 CCDC116Q8IYX3 515 aa10.12□□□□□ -0.79
SOX2-OT-244ENST00000627738 CPXM2Q8N436 756 aa10.12□□□□□ -0.79
SOX2-OT-244ENST00000627738 CARNMT1Q8N4J0 409 aa10.12□□□□□ -0.79
SOX2-OT-244ENST00000627738 TDRD5Q8NAT2 981 aaKnown RBP10.12□□□□□ -0.79
SOX2-OT-244ENST00000627738 OR7D4Q8NG98 312 aa10.12□□□□□ -0.79
SOX2-OT-244ENST00000627738 ITFG1Q8TB96 612 aa10.12□□□□□ -0.79
SOX2-OT-244ENST00000627738 NSMCE1Q8WV22 266 aa10.12□□□□□ -0.79
SOX2-OT-244ENST00000627738 ING5Q8WYH8 240 aa10.12□□□□□ -0.79
SOX2-OT-244ENST00000627738 FATE1Q969F0 183 aa10.12□□□□□ -0.79
SOX2-OT-244ENST00000627738 PPP2R3CQ969Q6 453 aa10.12□□□□□ -0.79
SOX2-OT-244ENST00000627738 PABPC5Q96DU9 382 aaKnown RBP10.12□□□□□ -0.79
SOX2-OT-244ENST00000627738 ZNF419Q96HQ0 510 aaPredicted RBP10.12□□□□□ -0.79
SOX2-OT-244ENST00000627738 ZSWIM3Q96MP5 696 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms