RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 PTPRN2Q92932 1015 aa22.42■■□□□ 1.18
PNKP-220ENST00000627232 MRGPRX2Q96LB1 330 aa22.42■■□□□ 1.18
PNKP-220ENST00000627232 MYRFLQ96LU7 910 aa22.42■■□□□ 1.18
PNKP-220ENST00000627232 VPS45Q9NRW7 570 aa22.42■■□□□ 1.18
PNKP-220ENST00000627232 C20orf96Q9NUD7 363 aaPredicted RBP22.42■■□□□ 1.18
PNKP-220ENST00000627232 ATP11BQ9Y2G3 1177 aa22.42■■□□□ 1.18
PNKP-220ENST00000627232 RAMP2O60895 175 aa22.41■■□□□ 1.18
PNKP-220ENST00000627232 CLTBP09497 229 aa22.41■■□□□ 1.18
PNKP-220ENST00000627232 BGNP21810 368 aa22.41■■□□□ 1.18
PNKP-220ENST00000627232 NMBRP28336 390 aa22.41■■□□□ 1.18
PNKP-220ENST00000627232 MARC1Q5VT66 337 aa22.41■■□□□ 1.18
PNKP-220ENST00000627232 ATG16L1Q676U5 607 aa22.41■■□□□ 1.18
PNKP-220ENST00000627232 STRA8Q7Z7C7 330 aa22.41■■□□□ 1.18
PNKP-220ENST00000627232 ARMC2Q8NEN0 867 aa22.41■■□□□ 1.18
PNKP-220ENST00000627232 AZIN2Q96A70 460 aa22.41■■□□□ 1.18
PNKP-220ENST00000627232 IMP4Q96G21 291 aaKnown RBP22.41■■□□□ 1.18
PNKP-220ENST00000627232 RMDN2Q96LZ7 410 aa22.41■■□□□ 1.18
PNKP-220ENST00000627232 FSD1LQ9BXM9 530 aa22.41■■□□□ 1.18
PNKP-220ENST00000627232 ARNT2Q9HBZ2 717 aa22.41■■□□□ 1.18
PNKP-220ENST00000627232 ALG13Q9NP73 1137 aaKnown RBP22.41■■□□□ 1.18
PNKP-220ENST00000627232 SIRPGQ9P1W8 387 aa22.41■■□□□ 1.18
PNKP-220ENST00000627232 MYLKQ15746 1914 aa22.41■■□□□ 1.18
PNKP-220ENST00000627232 CHD5Q8TDI0 1954 aa22.41■■□□□ 1.18
PNKP-220ENST00000627232 ZNF840PA6NDX5 716 aa22.41■■□□□ 1.18
PNKP-220ENST00000627232 F5H5T6 163 aa22.41■■□□□ 1.18
PNKP-220ENST00000627232 J3KR12 359 aa22.41■■□□□ 1.18
PNKP-220ENST00000627232 ACSL4O60488 711 aa22.41■■□□□ 1.18
PNKP-220ENST00000627232 UBOX5O94941 541 aa22.41■■□□□ 1.18
PNKP-220ENST00000627232 SEC24AO95486 1093 aa22.41■■□□□ 1.18
PNKP-220ENST00000627232 HADHAP40939 763 aa22.41■■□□□ 1.18
PNKP-220ENST00000627232 SERPINB8P50452 374 aa22.41■■□□□ 1.18
PNKP-220ENST00000627232 SERINC3Q13530 473 aa22.41■■□□□ 1.18
PNKP-220ENST00000627232 PDE1CQ14123 709 aaPredicted RBP22.41■■□□□ 1.18
PNKP-220ENST00000627232 POLD3Q15054 466 aaPredicted RBP22.41■■□□□ 1.18
PNKP-220ENST00000627232 SPOUT1Q5T280 376 aaKnown RBP22.41■■□□□ 1.18
PNKP-220ENST00000627232 HECTD3Q5T447 861 aa22.41■■□□□ 1.18
PNKP-220ENST00000627232 PLD4Q96BZ4 506 aa22.41■■□□□ 1.18
PNKP-220ENST00000627232 TMEM169Q96HH4 297 aa22.41■■□□□ 1.18
PNKP-220ENST00000627232 ZNF512Q96ME7 567 aaPredicted RBP22.41■■□□□ 1.18
PNKP-220ENST00000627232 RC3H2Q9HBD1 1191 aaKnown RBP22.41■■□□□ 1.18
PNKP-220ENST00000627232 IL1RAPL1Q9NZN1 696 aa22.41■■□□□ 1.18
PNKP-220ENST00000627232 TIMM44O43615 452 aa22.4■■□□□ 1.18
PNKP-220ENST00000627232 PMPCBO75439 489 aa22.4■■□□□ 1.18
PNKP-220ENST00000627232 DCTN3O75935 186 aa22.4■■□□□ 1.18
PNKP-220ENST00000627232 BPGMP07738 259 aa22.4■■□□□ 1.18
PNKP-220ENST00000627232 HMGA1P17096 107 aaKnown RBP22.4■■□□□ 1.18
PNKP-220ENST00000627232 LAG3P18627 525 aa22.4■■□□□ 1.18
PNKP-220ENST00000627232 KCNQ1P51787 676 aa22.4■■□□□ 1.18
PNKP-220ENST00000627232 HSP90AA5PQ58FG0 334 aa22.4■■□□□ 1.18
PNKP-220ENST00000627232 CMTR2Q8IYT2 770 aaKnown RBP22.4■■□□□ 1.18
PNKP-220ENST00000627232 TRMT2BQ96GJ1 504 aaKnown RBP22.4■■□□□ 1.18
PNKP-220ENST00000627232 MCMBPQ9BTE3 642 aa22.4■■□□□ 1.18
PNKP-220ENST00000627232 TRIM55Q9BYV6 548 aa22.4■■□□□ 1.18
PNKP-220ENST00000627232 NT5MQ9NPB1 228 aa22.4■■□□□ 1.18
PNKP-220ENST00000627232 TRPM5Q9NZQ8 1165 aa22.4■■□□□ 1.18
PNKP-220ENST00000627232 TCAF1Q9Y4C2 921 aa22.4■■□□□ 1.18
PNKP-220ENST00000627232 MRPL42Q9Y6G3 142 aaKnown RBP22.4■■□□□ 1.18
PNKP-220ENST00000627232 C2CD2LO14523 706 aa22.39■■□□□ 1.17
PNKP-220ENST00000627232 EFCAB14O75071 495 aa22.39■■□□□ 1.17
PNKP-220ENST00000627232 MPOP05164 745 aa22.39■■□□□ 1.17
PNKP-220ENST00000627232 TYK2P29597 1187 aa22.39■■□□□ 1.17
PNKP-220ENST00000627232 SLC11A2P49281 568 aa22.39■■□□□ 1.17
PNKP-220ENST00000627232 HARS2P49590 506 aaKnown RBP22.39■■□□□ 1.17
PNKP-220ENST00000627232 WNT3AP56704 352 aa22.39■■□□□ 1.17
PNKP-220ENST00000627232 SLC10A7Q0GE19 358 aa22.39■■□□□ 1.17
PNKP-220ENST00000627232 BNIP1Q12981 228 aa22.39■■□□□ 1.17
PNKP-220ENST00000627232 SETDB1Q15047 1291 aa22.39■■□□□ 1.17
PNKP-220ENST00000627232 NUDCD3Q8IVD9 361 aa22.39■■□□□ 1.17
PNKP-220ENST00000627232 LGI2Q8N0V4 545 aa22.39■■□□□ 1.17
PNKP-220ENST00000627232 DCLK2Q8N568 766 aa22.39■■□□□ 1.17
PNKP-220ENST00000627232 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP22.39■■□□□ 1.17
PNKP-220ENST00000627232 FITM2Q8N6M3 262 aa22.39■■□□□ 1.17
PNKP-220ENST00000627232 ANKLE1Q8NAG6 615 aa22.39■■□□□ 1.17
PNKP-220ENST00000627232 DIS3LQ8TF46 1054 aaKnown RBP22.39■■□□□ 1.17
PNKP-220ENST00000627232 PSMG2Q969U7 264 aa22.39■■□□□ 1.17
PNKP-220ENST00000627232 E2F7Q96AV8 911 aa22.39■■□□□ 1.17
PNKP-220ENST00000627232 AGAP2Q99490 1192 aa22.39■■□□□ 1.17
PNKP-220ENST00000627232 PRKD2Q9BZL6 878 aa22.39■■□□□ 1.17
PNKP-220ENST00000627232 ATP13A1Q9HD20 1204 aa22.39■■□□□ 1.17
PNKP-220ENST00000627232 H0YHG0 523 aa22.38■■□□□ 1.17
PNKP-220ENST00000627232 OR1E1P30953 314 aa22.38■■□□□ 1.17
PNKP-220ENST00000627232 ALDH1A3P47895 512 aa22.38■■□□□ 1.17
PNKP-220ENST00000627232 PPP3CCP48454 512 aa22.38■■□□□ 1.17
PNKP-220ENST00000627232 RAB33AQ14088 237 aa22.38■■□□□ 1.17
PNKP-220ENST00000627232 CNTN4Q8IWV2 1026 aa22.38■■□□□ 1.17
PNKP-220ENST00000627232 TADA1Q96BN2 335 aa22.38■■□□□ 1.17
PNKP-220ENST00000627232 C7orf26Q96N11 449 aa22.38■■□□□ 1.17
PNKP-220ENST00000627232 ZNF599Q96NL3 588 aa22.38■■□□□ 1.17
PNKP-220ENST00000627232 RANBP9Q96S59 729 aa22.38■■□□□ 1.17
PNKP-220ENST00000627232 NACA2Q9H009 215 aa22.38■■□□□ 1.17
PNKP-220ENST00000627232 SNX15Q9NRS6 342 aa22.38■■□□□ 1.17
PNKP-220ENST00000627232 IARS2Q9NSE4 1012 aaKnown RBP22.38■■□□□ 1.17
PNKP-220ENST00000627232 MAFFQ9ULX9 164 aa22.38■■□□□ 1.17
PNKP-220ENST00000627232 YIPF1Q9Y548 306 aa22.38■■□□□ 1.17
PNKP-220ENST00000627232 PRAMEF11O60813 436 aa22.37■■□□□ 1.17
PNKP-220ENST00000627232 PAMP19021 973 aa22.37■■□□□ 1.17
PNKP-220ENST00000627232 VEPH1Q14D04 833 aa22.37■■□□□ 1.17
PNKP-220ENST00000627232 FAM133BQ5BKY9 247 aaKnown RBP22.37■■□□□ 1.17
PNKP-220ENST00000627232 SPDYAQ5MJ70 313 aa22.37■■□□□ 1.17
PNKP-220ENST00000627232 N4BP2L1Q5TBK1 243 aaPredicted RBP22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms