RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 ZC3H12AQ5D1E8 599 aaKnown RBP11.23□□□□□ -0.61
VPS8-227ENST00000625842 RNASE11Q8TAA1 199 aaKnown RBP11.23□□□□□ -0.61
VPS8-227ENST00000625842 TM6SF2Q9BZW4 377 aa11.23□□□□□ -0.61
VPS8-227ENST00000625842 ROPN1BQ9BZX4 212 aaPredicted RBP11.23□□□□□ -0.61
VPS8-227ENST00000625842 CAAP1Q9H8G2 361 aa11.23□□□□□ -0.61
VPS8-227ENST00000625842 ROPN1Q9HAT0 212 aaPredicted RBP11.23□□□□□ -0.61
VPS8-227ENST00000625842 NPHS2Q9NP85 383 aa11.23□□□□□ -0.61
VPS8-227ENST00000625842 PLAAQ9Y263 795 aa11.23□□□□□ -0.61
VPS8-227ENST00000625842 CDC42BPAQ5VT25 1732 aa11.23□□□□□ -0.61
VPS8-227ENST00000625842 ZNF521Q96K83 1311 aa11.23□□□□□ -0.61
VPS8-227ENST00000625842 MGRN1O60291 552 aa11.23□□□□□ -0.61
VPS8-227ENST00000625842 LPOP22079 712 aaPredicted RBP11.23□□□□□ -0.61
VPS8-227ENST00000625842 HNMTP50135 292 aa11.23□□□□□ -0.61
VPS8-227ENST00000625842 PPARDQ03181 441 aa11.23□□□□□ -0.61
VPS8-227ENST00000625842 PGS1Q32NB8 556 aa11.23□□□□□ -0.61
VPS8-227ENST00000625842 ATP6AP1LQ52LC2 224 aa11.23□□□□□ -0.61
VPS8-227ENST00000625842 TMC8Q8IU68 726 aa11.23□□□□□ -0.61
VPS8-227ENST00000625842 HID1Q8IV36 788 aa11.23□□□□□ -0.61
VPS8-227ENST00000625842 RBFAQ8N0V3 343 aa11.23□□□□□ -0.61
VPS8-227ENST00000625842 HTR3CQ8WXA8 447 aa11.23□□□□□ -0.61
VPS8-227ENST00000625842 KCTD13Q8WZ19 329 aa11.23□□□□□ -0.61
VPS8-227ENST00000625842 BTBD9Q96Q07 612 aa11.23□□□□□ -0.61
VPS8-227ENST00000625842 ACBD6Q9BR61 282 aa11.23□□□□□ -0.61
VPS8-227ENST00000625842 RASSF4Q9H2L5 321 aa11.23□□□□□ -0.61
VPS8-227ENST00000625842 PADI2Q9Y2J8 665 aa11.23□□□□□ -0.61
VPS8-227ENST00000625842 KLHL20Q9Y2M5 609 aa11.23□□□□□ -0.61
VPS8-227ENST00000625842 AKAP8O43823 692 aaKnown RBP11.23□□□□□ -0.61
VPS8-227ENST00000625842 LARGE1O95461 756 aa11.23□□□□□ -0.61
VPS8-227ENST00000625842 PLGP00747 810 aaPredicted RBP11.23□□□□□ -0.61
VPS8-227ENST00000625842 ALPIP09923 528 aa11.23□□□□□ -0.61
VPS8-227ENST00000625842 PAICSP22234 425 aaKnown RBP11.23□□□□□ -0.61
VPS8-227ENST00000625842 WASP42768 502 aa11.23□□□□□ -0.61
VPS8-227ENST00000625842 CDK16Q00536 496 aa11.23□□□□□ -0.61
VPS8-227ENST00000625842 HSPA14Q0VDF9 509 aa11.23□□□□□ -0.61
VPS8-227ENST00000625842 ORC1Q13415 861 aa11.23□□□□□ -0.61
VPS8-227ENST00000625842 TRIM60Q495X7 471 aa11.23□□□□□ -0.61
VPS8-227ENST00000625842 FAM35AQ86V20 835 aa11.23□□□□□ -0.61
VPS8-227ENST00000625842 CENPSQ8N2Z9 138 aa11.23□□□□□ -0.61
VPS8-227ENST00000625842 ING5Q8WYH8 240 aa11.23□□□□□ -0.61
VPS8-227ENST00000625842 COL26A1Q96A83 441 aa11.23□□□□□ -0.61
VPS8-227ENST00000625842 KLF15Q9UIH9 416 aa11.23□□□□□ -0.61
VPS8-227ENST00000625842 FZD1Q9UP38 647 aa11.23□□□□□ -0.61
VPS8-227ENST00000625842 PCDHA3Q9Y5H8 950 aa11.23□□□□□ -0.61
VPS8-227ENST00000625842 CEP152O94986 1710 aa11.23□□□□□ -0.61
VPS8-227ENST00000625842 A0A1B0GVM2 712 aa11.23□□□□□ -0.61
VPS8-227ENST00000625842 TCAF2A6NFQ2 919 aa11.23□□□□□ -0.61
VPS8-227ENST00000625842 TMEM150CB9EJG8 249 aa11.23□□□□□ -0.61
VPS8-227ENST00000625842 NPC1O15118 1278 aa11.23□□□□□ -0.61
VPS8-227ENST00000625842 SLITRK3O94933 977 aa11.23□□□□□ -0.61
VPS8-227ENST00000625842 FGF1P05230 155 aa11.23□□□□□ -0.61
VPS8-227ENST00000625842 ICAM3P32942 547 aa11.23□□□□□ -0.61
VPS8-227ENST00000625842 TRIP10Q15642 601 aa11.23□□□□□ -0.61
VPS8-227ENST00000625842 LSM12Q3MHD2 195 aaKnown RBP11.23□□□□□ -0.61
VPS8-227ENST00000625842 SLC36A4Q6YBV0 504 aa11.23□□□□□ -0.61
VPS8-227ENST00000625842 KBTBD6Q86V97 674 aa11.23□□□□□ -0.61
VPS8-227ENST00000625842 ALLCQ8N6M5 410 aa11.23□□□□□ -0.61
VPS8-227ENST00000625842 PIP4K2CQ8TBX8 421 aa11.23□□□□□ -0.61
VPS8-227ENST00000625842 PROX1Q92786 737 aa11.23□□□□□ -0.61
VPS8-227ENST00000625842 INPP5DQ92835 1189 aa11.23□□□□□ -0.61
VPS8-227ENST00000625842 GFM2Q969S9 779 aaKnown RBP11.23□□□□□ -0.61
VPS8-227ENST00000625842 MAGED4Q96JG8 741 aa11.23□□□□□ -0.61
VPS8-227ENST00000625842 MFSD14AQ96MC6 490 aa11.23□□□□□ -0.61
VPS8-227ENST00000625842 ACO2Q99798 780 aaKnown RBP11.23□□□□□ -0.61
VPS8-227ENST00000625842 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.23□□□□□ -0.61
VPS8-227ENST00000625842 A0A0J9YVX5 310 aa11.22□□□□□ -0.61
VPS8-227ENST00000625842 PRR23D1E9PI22 279 aaPredicted RBP11.22□□□□□ -0.61
VPS8-227ENST00000625842 MYO1CO00159 1063 aa11.22□□□□□ -0.61
VPS8-227ENST00000625842 INPPL1O15357 1258 aa11.22□□□□□ -0.61
VPS8-227ENST00000625842 PRR23D2P0DMB1 279 aaPredicted RBP11.22□□□□□ -0.61
VPS8-227ENST00000625842 VAV1P15498 845 aa11.22□□□□□ -0.61
VPS8-227ENST00000625842 GLRA2P23416 452 aa11.22□□□□□ -0.61
VPS8-227ENST00000625842 SEC13P55735 322 aa11.22□□□□□ -0.61
VPS8-227ENST00000625842 AP1S1P61966 158 aa11.22□□□□□ -0.61
VPS8-227ENST00000625842 NCF4Q15080 339 aa11.22□□□□□ -0.61
VPS8-227ENST00000625842 INPP4AQ96PE3 977 aaPredicted RBP11.22□□□□□ -0.61
VPS8-227ENST00000625842 EXD2Q9NVH0 621 aa11.22□□□□□ -0.61
VPS8-227ENST00000625842 CD207Q9UJ71 328 aa11.22□□□□□ -0.61
VPS8-227ENST00000625842 NOX1Q9Y5S8 564 aa11.22□□□□□ -0.61
VPS8-227ENST00000625842 FAM234BA2RU67 622 aa11.22□□□□□ -0.61
VPS8-227ENST00000625842 H0YGN5 161 aa11.22□□□□□ -0.61
VPS8-227ENST00000625842 XPO1O14980 1071 aaKnown RBP11.22□□□□□ -0.61
VPS8-227ENST00000625842 PEX1O43933 1283 aa11.22□□□□□ -0.61
VPS8-227ENST00000625842 FOXD2O60548 495 aaPredicted RBP11.22□□□□□ -0.61
VPS8-227ENST00000625842 TM7SF2O76062 418 aa11.22□□□□□ -0.61
VPS8-227ENST00000625842 AGTP01019 485 aa11.22□□□□□ -0.61
VPS8-227ENST00000625842 SLC35G6P0C7Q6 338 aa11.22□□□□□ -0.61
VPS8-227ENST00000625842 NFKB1P19838 968 aa11.22□□□□□ -0.61
VPS8-227ENST00000625842 GABPB1Q06547 395 aaPredicted RBP11.22□□□□□ -0.61
VPS8-227ENST00000625842 SF1Q15637 639 aaKnown RBP11.22□□□□□ -0.61
VPS8-227ENST00000625842 TRIM71Q2Q1W2 868 aaKnown RBP11.22□□□□□ -0.61
VPS8-227ENST00000625842 SPANXN3Q5MJ09 141 aa11.22□□□□□ -0.61
VPS8-227ENST00000625842 KRT77Q7Z794 578 aa11.22□□□□□ -0.61
VPS8-227ENST00000625842 ST13P4Q8IZP2 240 aaPredicted RBP11.22□□□□□ -0.61
VPS8-227ENST00000625842 TCAIMQ8N3R3 496 aa11.22□□□□□ -0.61
VPS8-227ENST00000625842 RP9Q8TA86 221 aaKnown RBP11.22□□□□□ -0.61
VPS8-227ENST00000625842 POP5Q969H6 163 aaKnown RBP11.22□□□□□ -0.61
VPS8-227ENST00000625842 TAPBPLQ9BX59 468 aa11.22□□□□□ -0.61
VPS8-227ENST00000625842 RSPH9Q9H1X1 276 aaPredicted RBP11.22□□□□□ -0.61
VPS8-227ENST00000625842 NCF1BA6NI72 391 aaPredicted RBP11.22□□□□□ -0.61
VPS8-227ENST00000625842 NCF1CA8MVU1 366 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms