RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 ZNF804BA4D1E1 1349 aa8.03□□□□□ -1.12
VPS11-209ENST00000622309 FAM155AB1AL88 458 aaPredicted RBP8.03□□□□□ -1.12
VPS11-209ENST00000622309 TDP2O95551 362 aa8.03□□□□□ -1.12
VPS11-209ENST00000622309 GSTM1P09488 218 aa8.03□□□□□ -1.12
VPS11-209ENST00000622309 USP17L8P0C7I0 530 aa8.03□□□□□ -1.12
VPS11-209ENST00000622309 TMEM191BP0C7N4 346 aa8.03□□□□□ -1.12
VPS11-209ENST00000622309 DBTP11182 482 aaKnown RBP8.03□□□□□ -1.12
VPS11-209ENST00000622309 L1CAMP32004 1257 aa8.03□□□□□ -1.12
VPS11-209ENST00000622309 SERPINB5P36952 375 aa8.03□□□□□ -1.12
VPS11-209ENST00000622309 CETN1Q12798 172 aa8.03□□□□□ -1.12
VPS11-209ENST00000622309 BFSP1Q12934 665 aa8.03□□□□□ -1.12
VPS11-209ENST00000622309 SLC13A2Q13183 592 aa8.03□□□□□ -1.12
VPS11-209ENST00000622309 LAPTM5Q13571 262 aa8.03□□□□□ -1.12
VPS11-209ENST00000622309 ZFP69Q49AA0 526 aa8.03□□□□□ -1.12
VPS11-209ENST00000622309 PIGGQ5H8A4 983 aa8.03□□□□□ -1.12
VPS11-209ENST00000622309 PAGE2BQ5JRK9 111 aa8.03□□□□□ -1.12
VPS11-209ENST00000622309 ARMC4Q5T2S8 1044 aa8.03□□□□□ -1.12
VPS11-209ENST00000622309 CES4AQ5XG92 561 aa8.03□□□□□ -1.12
VPS11-209ENST00000622309 AGMOQ6ZNB7 445 aa8.03□□□□□ -1.12
VPS11-209ENST00000622309 PIWIL3Q7Z3Z3 882 aaKnown RBP8.03□□□□□ -1.12
VPS11-209ENST00000622309 GALNT12Q8IXK2 581 aa8.03□□□□□ -1.12
VPS11-209ENST00000622309 PARP8Q8N3A8 854 aa8.03□□□□□ -1.12
VPS11-209ENST00000622309 TAB3Q8N5C8 712 aaPredicted RBP8.03□□□□□ -1.12
VPS11-209ENST00000622309 BEND7Q8N7W2 519 aaPredicted RBP8.03□□□□□ -1.12
VPS11-209ENST00000622309 UBR7Q8N806 425 aa8.03□□□□□ -1.12
VPS11-209ENST00000622309 PNMA1Q8ND90 353 aa8.03□□□□□ -1.12
VPS11-209ENST00000622309 DACH2Q96NX9 599 aa8.03□□□□□ -1.12
VPS11-209ENST00000622309 LENG8Q96PV6 779 aaPredicted RBP8.03□□□□□ -1.12
VPS11-209ENST00000622309 NOL11Q9H8H0 719 aaKnown RBP8.03□□□□□ -1.12
VPS11-209ENST00000622309 SYTL2Q9HCH5 934 aa8.03□□□□□ -1.12
VPS11-209ENST00000622309 ATP13A2Q9NQ11 1180 aa8.03□□□□□ -1.12
VPS11-209ENST00000622309 VTI1BQ9UEU0 232 aa8.03□□□□□ -1.12
VPS11-209ENST00000622309 MKL2Q9ULH7 1088 aa8.03□□□□□ -1.12
VPS11-209ENST00000622309 VPS4AQ9UN37 437 aa8.03□□□□□ -1.12
VPS11-209ENST00000622309 BAZ2AQ9UIF9 1905 aaKnown RBP8.03□□□□□ -1.12
VPS11-209ENST00000622309 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.03□□□□□ -1.12
VPS11-209ENST00000622309 TRIM64A6NGJ6 449 aa8.03□□□□□ -1.12
VPS11-209ENST00000622309 C12orf71A8MTZ7 269 aa8.03□□□□□ -1.12
VPS11-209ENST00000622309 TK2O00142 265 aa8.03□□□□□ -1.12
VPS11-209ENST00000622309 RNF103O00237 685 aa8.03□□□□□ -1.12
VPS11-209ENST00000622309 SLC37A4O43826 429 aa8.03□□□□□ -1.12
VPS11-209ENST00000622309 GNRH1P01148 92 aa8.03□□□□□ -1.12
VPS11-209ENST00000622309 GNAO1P09471 354 aa8.03□□□□□ -1.12
VPS11-209ENST00000622309 TRIM49P0CI25 452 aa8.03□□□□□ -1.12
VPS11-209ENST00000622309 TRIM49CP0CI26 452 aa8.03□□□□□ -1.12
VPS11-209ENST00000622309 BMP3P12645 472 aa8.03□□□□□ -1.12
VPS11-209ENST00000622309 CKMT2P17540 419 aa8.03□□□□□ -1.12
VPS11-209ENST00000622309 ATF7P17544 494 aaPredicted RBP8.03□□□□□ -1.12
VPS11-209ENST00000622309 GARTP22102 1010 aa8.03□□□□□ -1.12
VPS11-209ENST00000622309 RBL1P28749 1068 aa8.03□□□□□ -1.12
VPS11-209ENST00000622309 NUDT1P36639 197 aa8.03□□□□□ -1.12
VPS11-209ENST00000622309 OR3A3P47888 321 aa8.03□□□□□ -1.12
VPS11-209ENST00000622309 LEPRP48357 1165 aaKnown RBP8.03□□□□□ -1.12
VPS11-209ENST00000622309 SLC1A6P48664 564 aa8.03□□□□□ -1.12
VPS11-209ENST00000622309 GJA9P57773 515 aa8.03□□□□□ -1.12
VPS11-209ENST00000622309 RPS6P62753 249 aaKnown RBP8.03□□□□□ -1.12
VPS11-209ENST00000622309 CDC20Q12834 499 aa8.03□□□□□ -1.12
VPS11-209ENST00000622309 KLF1Q13351 362 aaPredicted RBP8.03□□□□□ -1.12
VPS11-209ENST00000622309 SELPLGQ14242 412 aa8.03□□□□□ -1.12
VPS11-209ENST00000622309 GNA13Q14344 377 aa8.03□□□□□ -1.12
VPS11-209ENST00000622309 POU6F1Q14863 301 aa8.03□□□□□ -1.12
VPS11-209ENST00000622309 CCDC142Q17RM4 750 aa8.03□□□□□ -1.12
VPS11-209ENST00000622309 NHSL2Q5HYW2 709 aa8.03□□□□□ -1.12
VPS11-209ENST00000622309 SLC9A4Q6AI14 798 aa8.03□□□□□ -1.12
VPS11-209ENST00000622309 DCUN1D2Q6PH85 259 aa8.03□□□□□ -1.12
VPS11-209ENST00000622309 TRAF7Q6Q0C0 670 aa8.03□□□□□ -1.12
VPS11-209ENST00000622309 ABRAXAS1Q6UWZ7 409 aa8.03□□□□□ -1.12
VPS11-209ENST00000622309 ADAMTSL2Q86TH1 951 aa8.03□□□□□ -1.12
VPS11-209ENST00000622309 SLCO6A1Q86UG4 719 aa8.03□□□□□ -1.12
VPS11-209ENST00000622309 COLGALT2Q8IYK4 626 aa8.03□□□□□ -1.12
VPS11-209ENST00000622309 POC5Q8NA72 575 aa8.03□□□□□ -1.12
VPS11-209ENST00000622309 OR5H6Q8NGV6 325 aa8.03□□□□□ -1.12
VPS11-209ENST00000622309 SLC44A1Q8WWI5 657 aa8.03□□□□□ -1.12
VPS11-209ENST00000622309 METTL2AQ96IZ6 378 aaKnown RBP8.03□□□□□ -1.12
VPS11-209ENST00000622309 RBM14Q96PK6 669 aaKnown RBP8.03□□□□□ -1.12
VPS11-209ENST00000622309 IL12RB2Q99665 862 aa8.03□□□□□ -1.12
VPS11-209ENST00000622309 TARS2Q9BW92 718 aaKnown RBP8.03□□□□□ -1.12
VPS11-209ENST00000622309 AKIP1Q9NQ31 210 aa8.03□□□□□ -1.12
VPS11-209ENST00000622309 DNAJC28Q9NX36 388 aa8.03□□□□□ -1.12
VPS11-209ENST00000622309 LUZP4Q9P127 313 aa8.03□□□□□ -1.12
VPS11-209ENST00000622309 CFL2Q9Y281 166 aa8.03□□□□□ -1.12
VPS11-209ENST00000622309 NFASCO94856 1347 aa8.03□□□□□ -1.12
VPS11-209ENST00000622309 KIF13BQ9NQT8 1826 aa8.03□□□□□ -1.12
VPS11-209ENST00000622309 FAM221BA6H8Z2 402 aa8.02□□□□□ -1.12
VPS11-209ENST00000622309 USP17L3A6NCW0 530 aa8.02□□□□□ -1.12
VPS11-209ENST00000622309 USP17L4A6NCW7 530 aa8.02□□□□□ -1.12
VPS11-209ENST00000622309 LIASO43766 372 aa8.02□□□□□ -1.12
VPS11-209ENST00000622309 SGPL1O95470 568 aa8.02□□□□□ -1.12
VPS11-209ENST00000622309 CD58P19256 250 aa8.02□□□□□ -1.12
VPS11-209ENST00000622309 MYF6P23409 242 aa8.02□□□□□ -1.12
VPS11-209ENST00000622309 SERPINB10P48595 397 aa8.02□□□□□ -1.12
VPS11-209ENST00000622309 NLRP11P59045 1033 aaKnown RBP8.02□□□□□ -1.12
VPS11-209ENST00000622309 MMRN1Q13201 1228 aa8.02□□□□□ -1.12
VPS11-209ENST00000622309 CEACAM7Q14002 265 aa8.02□□□□□ -1.12
VPS11-209ENST00000622309 CBWD6Q4V339 395 aa8.02□□□□□ -1.12
VPS11-209ENST00000622309 CBWD3Q5JTY5 395 aa8.02□□□□□ -1.12
VPS11-209ENST00000622309 CBWD5Q5RIA9 395 aa8.02□□□□□ -1.12
VPS11-209ENST00000622309 FNBP1LQ5T0N5 605 aa8.02□□□□□ -1.12
VPS11-209ENST00000622309 USP17L1Q7RTZ2 530 aa8.02□□□□□ -1.12
VPS11-209ENST00000622309 POLNQ7Z5Q5 900 aa8.02□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms