RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 EFEMP2O95967 443 aa17.77■□□□□ 0.44
FAM3A-222ENST00000621967 PTPN1P18031 435 aaKnown RBP17.77■□□□□ 0.44
FAM3A-222ENST00000621967 ACAT1P24752 427 aaKnown RBP17.77■□□□□ 0.44
FAM3A-222ENST00000621967 CDC25CP30307 473 aa17.77■□□□□ 0.44
FAM3A-222ENST00000621967 SLC1A6P48664 564 aa17.77■□□□□ 0.44
FAM3A-222ENST00000621967 NDUFV1P49821 464 aa17.77■□□□□ 0.44
FAM3A-222ENST00000621967 ALDH18A1P54886 795 aaKnown RBP17.77■□□□□ 0.44
FAM3A-222ENST00000621967 IRX4P78413 519 aa17.77■□□□□ 0.44
FAM3A-222ENST00000621967 ARHGAP8P85298 464 aa17.77■□□□□ 0.44
FAM3A-222ENST00000621967 DEUP1Q05D60 604 aa17.77■□□□□ 0.44
FAM3A-222ENST00000621967 CCDC6Q16204 474 aa17.77■□□□□ 0.44
FAM3A-222ENST00000621967 SNX30Q5VWJ9 437 aa17.77■□□□□ 0.44
FAM3A-222ENST00000621967 ANO7Q6IWH7 933 aa17.77■□□□□ 0.44
FAM3A-222ENST00000621967 ANKS3Q6ZW76 656 aa17.77■□□□□ 0.44
FAM3A-222ENST00000621967 NET1Q7Z628 596 aaPredicted RBP17.77■□□□□ 0.44
FAM3A-222ENST00000621967 CCNYQ8ND76 341 aa17.77■□□□□ 0.44
FAM3A-222ENST00000621967 FBXO22Q8NEZ5 403 aa17.77■□□□□ 0.44
FAM3A-222ENST00000621967 NRG4Q8WWG1 115 aa17.77■□□□□ 0.44
FAM3A-222ENST00000621967 TIFAQ96CG3 184 aa17.77■□□□□ 0.44
FAM3A-222ENST00000621967 CPNE1Q99829 537 aa17.77■□□□□ 0.44
FAM3A-222ENST00000621967 LRRC4Q9HBW1 653 aa17.77■□□□□ 0.44
FAM3A-222ENST00000621967 ZFATQ9P243 1243 aa17.77■□□□□ 0.44
FAM3A-222ENST00000621967 CORO1CQ9ULV4 474 aaPredicted RBP17.77■□□□□ 0.44
FAM3A-222ENST00000621967 DNAJC16Q9Y2G8 782 aa17.77■□□□□ 0.44
FAM3A-222ENST00000621967 H7C4K7 107 aa17.76■□□□□ 0.43
FAM3A-222ENST00000621967 CAPN9O14815 690 aa17.76■□□□□ 0.43
FAM3A-222ENST00000621967 OAZ2O95190 189 aa17.76■□□□□ 0.43
FAM3A-222ENST00000621967 FYNP06241 537 aa17.76■□□□□ 0.43
FAM3A-222ENST00000621967 ALOX15P16050 662 aaPredicted RBP17.76■□□□□ 0.43
FAM3A-222ENST00000621967 GRK2P25098 689 aa17.76■□□□□ 0.43
FAM3A-222ENST00000621967 CA8P35219 290 aa17.76■□□□□ 0.43
FAM3A-222ENST00000621967 TSPY1Q01534 308 aa17.76■□□□□ 0.43
FAM3A-222ENST00000621967 IFRD2Q12894 506 aaPredicted RBP17.76■□□□□ 0.43
FAM3A-222ENST00000621967 MUM1Q2TAK8 710 aa17.76■□□□□ 0.43
FAM3A-222ENST00000621967 CTXN3Q4LDR2 81 aa17.76■□□□□ 0.43
FAM3A-222ENST00000621967 GRTP1Q5TC63 336 aa17.76■□□□□ 0.43
FAM3A-222ENST00000621967 HFE2Q6ZVN8 426 aa17.76■□□□□ 0.43
FAM3A-222ENST00000621967 SCUBE1Q8IWY4 988 aa17.76■□□□□ 0.43
FAM3A-222ENST00000621967 TP53INP2Q8IXH6 220 aa17.76■□□□□ 0.43
FAM3A-222ENST00000621967 STMN2Q93045 179 aa17.76■□□□□ 0.43
FAM3A-222ENST00000621967 FAM161BQ96MY7 647 aa17.76■□□□□ 0.43
FAM3A-222ENST00000621967 RILPQ96NA2 401 aa17.76■□□□□ 0.43
FAM3A-222ENST00000621967 SORT1Q99523 831 aa17.76■□□□□ 0.43
FAM3A-222ENST00000621967 CERS4Q9HA82 394 aa17.76■□□□□ 0.43
FAM3A-222ENST00000621967 SEPT10Q9P0V9 454 aa17.76■□□□□ 0.43
FAM3A-222ENST00000621967 COLQQ9Y215 455 aaPredicted RBP17.76■□□□□ 0.43
FAM3A-222ENST00000621967 LZTS1Q9Y250 596 aa17.76■□□□□ 0.43
FAM3A-222ENST00000621967 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.76■□□□□ 0.43
FAM3A-222ENST00000621967 CHD9Q3L8U1 2897 aa17.76■□□□□ 0.43
FAM3A-222ENST00000621967 PLXNA4Q9HCM2 1894 aa17.76■□□□□ 0.43
FAM3A-222ENST00000621967 A6NHS1 94 aa17.76■□□□□ 0.43
FAM3A-222ENST00000621967 AP2A1O95782 977 aa17.76■□□□□ 0.43
FAM3A-222ENST00000621967 KCNA4P22459 653 aa17.76■□□□□ 0.43
FAM3A-222ENST00000621967 PTPN3P26045 913 aa17.76■□□□□ 0.43
FAM3A-222ENST00000621967 ADRA1BP35368 520 aa17.76■□□□□ 0.43
FAM3A-222ENST00000621967 PDE1BQ01064 536 aa17.76■□□□□ 0.43
FAM3A-222ENST00000621967 KDSRQ06136 332 aa17.76■□□□□ 0.43
FAM3A-222ENST00000621967 THOC5Q13769 683 aaKnown RBP17.76■□□□□ 0.43
FAM3A-222ENST00000621967 RCN2Q14257 317 aa17.76■□□□□ 0.43
FAM3A-222ENST00000621967 PSMD5Q16401 504 aa17.76■□□□□ 0.43
FAM3A-222ENST00000621967 TRMT5Q32P41 509 aaKnown RBP17.76■□□□□ 0.43
FAM3A-222ENST00000621967 TRIM68Q6AZZ1 485 aa17.76■□□□□ 0.43
FAM3A-222ENST00000621967 PRSS55Q6UWB4 352 aaPredicted RBP17.76■□□□□ 0.43
FAM3A-222ENST00000621967 LRRC74BQ6ZQY2 392 aa17.76■□□□□ 0.43
FAM3A-222ENST00000621967 SIX6OS1Q8N1H7 587 aa17.76■□□□□ 0.43
FAM3A-222ENST00000621967 OR6Y1Q8NGX8 325 aa17.76■□□□□ 0.43
FAM3A-222ENST00000621967 FCRL3Q96P31 734 aaPredicted RBP17.76■□□□□ 0.43
FAM3A-222ENST00000621967 SYT15Q9BQS2 421 aa17.76■□□□□ 0.43
FAM3A-222ENST00000621967 ACBD6Q9BR61 282 aa17.76■□□□□ 0.43
FAM3A-222ENST00000621967 FAM167BQ9BTA0 163 aa17.76■□□□□ 0.43
FAM3A-222ENST00000621967 FAM96AQ9H5X1 160 aa17.76■□□□□ 0.43
FAM3A-222ENST00000621967 WDR6Q9NNW5 1121 aaKnown RBP17.76■□□□□ 0.43
FAM3A-222ENST00000621967 COPG2Q9UBF2 871 aa17.76■□□□□ 0.43
FAM3A-222ENST00000621967 ZNF212Q9UDV6 495 aa17.76■□□□□ 0.43
FAM3A-222ENST00000621967 CDH9Q9ULB4 789 aa17.76■□□□□ 0.43
FAM3A-222ENST00000621967 SUFUQ9UMX1 484 aa17.76■□□□□ 0.43
FAM3A-222ENST00000621967 RPS6KL1Q9Y6S9 549 aa17.76■□□□□ 0.43
FAM3A-222ENST00000621967 CHD7Q9P2D1 2997 aa17.75■□□□□ 0.43
FAM3A-222ENST00000621967 SYNJ2BP-COX16A0A087WUM0 186 aa17.75■□□□□ 0.43
FAM3A-222ENST00000621967 FBXO21O94952 628 aa17.75■□□□□ 0.43
FAM3A-222ENST00000621967 CSPG5O95196 566 aa17.75■□□□□ 0.43
FAM3A-222ENST00000621967 ERVK-10P10266 1014 aa17.75■□□□□ 0.43
FAM3A-222ENST00000621967 ERCC2P18074 760 aa17.75■□□□□ 0.43
FAM3A-222ENST00000621967 CPOXP36551 454 aa17.75■□□□□ 0.43
FAM3A-222ENST00000621967 GARSP41250 739 aaKnown RBP17.75■□□□□ 0.43
FAM3A-222ENST00000621967 HCAR3P49019 387 aa17.75■□□□□ 0.43
FAM3A-222ENST00000621967 TKTL1P51854 596 aa17.75■□□□□ 0.43
FAM3A-222ENST00000621967 SESN3P58005 492 aa17.75■□□□□ 0.43
FAM3A-222ENST00000621967 DSG1Q02413 1049 aa17.75■□□□□ 0.43
FAM3A-222ENST00000621967 UBE3AQ05086 875 aa17.75■□□□□ 0.43
FAM3A-222ENST00000621967 NME3Q13232 169 aa17.75■□□□□ 0.43
FAM3A-222ENST00000621967 UBAP2LQ14157 1087 aaKnown RBP17.75■□□□□ 0.43
FAM3A-222ENST00000621967 MDH1BQ5I0G3 518 aa17.75■□□□□ 0.43
FAM3A-222ENST00000621967 PRPF38BQ5VTL8 546 aaKnown RBP17.75■□□□□ 0.43
FAM3A-222ENST00000621967 KIAA0319Q5VV43 1072 aa17.75■□□□□ 0.43
FAM3A-222ENST00000621967 BSPRYQ5W0U4 402 aa17.75■□□□□ 0.43
FAM3A-222ENST00000621967 ATG14Q6ZNE5 492 aa17.75■□□□□ 0.43
FAM3A-222ENST00000621967 PID1Q7Z2X4 250 aa17.75■□□□□ 0.43
FAM3A-222ENST00000621967 TMEM135Q86UB9 458 aa17.75■□□□□ 0.43
FAM3A-222ENST00000621967 C10orf107Q8IVU9 208 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 991.2 ms