RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 ZNF354CQ86Y25 554 aa14.59□□□□□ -0.07
CBWD3-217ENST00000621474 FAM160A2Q8N612 972 aaPredicted RBP14.59□□□□□ -0.07
CBWD3-217ENST00000621474 ATOH1Q92858 354 aaPredicted RBP14.59□□□□□ -0.07
CBWD3-217ENST00000621474 ZNF419Q96HQ0 510 aaPredicted RBP14.59□□□□□ -0.07
CBWD3-217ENST00000621474 HERPUD2Q9BSE4 406 aa14.59□□□□□ -0.07
CBWD3-217ENST00000621474 CEP44Q9C0F1 390 aa14.59□□□□□ -0.07
CBWD3-217ENST00000621474 TNKS2Q9H2K2 1166 aa14.59□□□□□ -0.07
CBWD3-217ENST00000621474 DTLQ9NZJ0 730 aa14.59□□□□□ -0.07
CBWD3-217ENST00000621474 USP36Q9P275 1121 aaKnown RBP14.59□□□□□ -0.07
CBWD3-217ENST00000621474 BCCIPQ9P287 314 aaKnown RBP eCLIP14.59□□□□□ -0.07
CBWD3-217ENST00000621474 SARDHQ9UL12 918 aa14.59□□□□□ -0.07
CBWD3-217ENST00000621474 GON4LQ3T8J9 2241 aa14.59□□□□□ -0.07
CBWD3-217ENST00000621474 CCDC66A2RUB6 948 aa14.58□□□□□ -0.08
CBWD3-217ENST00000621474 ZSCAN5CA6NGD5 496 aaPredicted RBP14.58□□□□□ -0.08
CBWD3-217ENST00000621474 MCF2LO15068 1137 aa14.58□□□□□ -0.08
CBWD3-217ENST00000621474 DDX3YO15523 660 aaKnown RBP14.58□□□□□ -0.08
CBWD3-217ENST00000621474 NRDCO43847 1150 aa14.58□□□□□ -0.08
CBWD3-217ENST00000621474 TMCC1O94876 653 aa14.58□□□□□ -0.08
CBWD3-217ENST00000621474 KRT10P13645 584 aa14.58□□□□□ -0.08
CBWD3-217ENST00000621474 P2RY2P41231 377 aa14.58□□□□□ -0.08
CBWD3-217ENST00000621474 GALNT2Q10471 571 aa14.58□□□□□ -0.08
CBWD3-217ENST00000621474 LLGL1Q15334 1064 aa14.58□□□□□ -0.08
CBWD3-217ENST00000621474 IFI16Q16666 785 aaKnown RBP14.58□□□□□ -0.08
CBWD3-217ENST00000621474 INO80DQ53TQ3 878 aaPredicted RBP14.58□□□□□ -0.08
CBWD3-217ENST00000621474 DCAF12L1Q5VU92 463 aa14.58□□□□□ -0.08
CBWD3-217ENST00000621474 SPOCD1Q6ZMY3 1216 aa14.58□□□□□ -0.08
CBWD3-217ENST00000621474 DPY19L3Q6ZPD9 716 aa14.58□□□□□ -0.08
CBWD3-217ENST00000621474 METTL3Q86U44 580 aaKnown RBP14.58□□□□□ -0.08
CBWD3-217ENST00000621474 PGBD3Q8N328 593 aa14.58□□□□□ -0.08
CBWD3-217ENST00000621474 EXD1Q8NHP7 514 aa14.58□□□□□ -0.08
CBWD3-217ENST00000621474 ISG20Q96AZ6 181 aaKnown RBP14.58□□□□□ -0.08
CBWD3-217ENST00000621474 SIPA1Q96FS4 1042 aa14.58□□□□□ -0.08
CBWD3-217ENST00000621474 HES6Q96HZ4 224 aa14.58□□□□□ -0.08
CBWD3-217ENST00000621474 TM6SF2Q9BZW4 377 aa14.58□□□□□ -0.08
CBWD3-217ENST00000621474 FBRSQ9HAH7 460 aa14.58□□□□□ -0.08
CBWD3-217ENST00000621474 IPO11Q9UI26 975 aaKnown RBP14.58□□□□□ -0.08
CBWD3-217ENST00000621474 INVSQ9Y283 1065 aa14.58□□□□□ -0.08
CBWD3-217ENST00000621474 OTOGLQ3ZCN5 2332 aa14.57□□□□□ -0.08
CBWD3-217ENST00000621474 hCG_1818297A0A087WSY0 165 aa14.57□□□□□ -0.08
CBWD3-217ENST00000621474 ZRANB2O95218 330 aaKnown RBP eCLIP14.57□□□□□ -0.08
CBWD3-217ENST00000621474 PTMAP06454 111 aaKnown RBP14.57□□□□□ -0.08
CBWD3-217ENST00000621474 BCKDHBP21953 392 aa14.57□□□□□ -0.08
CBWD3-217ENST00000621474 GARSP41250 739 aaKnown RBP14.57□□□□□ -0.08
CBWD3-217ENST00000621474 GEMIN4P57678 1058 aaKnown RBP14.57□□□□□ -0.08
CBWD3-217ENST00000621474 IL10RBQ08334 325 aa14.57□□□□□ -0.08
CBWD3-217ENST00000621474 CCDC173Q0VFZ6 552 aa14.57□□□□□ -0.08
CBWD3-217ENST00000621474 CYTH1Q15438 398 aa14.57□□□□□ -0.08
CBWD3-217ENST00000621474 TFDP3Q5H9I0 405 aa14.57□□□□□ -0.08
CBWD3-217ENST00000621474 AADACL2Q6P093 401 aa14.57□□□□□ -0.08
CBWD3-217ENST00000621474 KIAA1324Q6UXG2 1013 aaKnown RBP14.57□□□□□ -0.08
CBWD3-217ENST00000621474 PEX26Q7Z412 305 aa14.57□□□□□ -0.08
CBWD3-217ENST00000621474 MMAAQ8IVH4 418 aaKnown RBP14.57□□□□□ -0.08
CBWD3-217ENST00000621474 REXO1L1PQ8IX06 675 aa14.57□□□□□ -0.08
CBWD3-217ENST00000621474 SYCE1Q8N0S2 351 aa14.57□□□□□ -0.08
CBWD3-217ENST00000621474 PCDH20Q8N6Y1 951 aaKnown RBP14.57□□□□□ -0.08
CBWD3-217ENST00000621474 CHST14Q8NCH0 376 aa14.57□□□□□ -0.08
CBWD3-217ENST00000621474 LRRN4Q8WUT4 740 aa14.57□□□□□ -0.08
CBWD3-217ENST00000621474 GAB3Q8WWW8 586 aa14.57□□□□□ -0.08
CBWD3-217ENST00000621474 PRCCQ92733 491 aaPredicted RBP14.57□□□□□ -0.08
CBWD3-217ENST00000621474 IRF2BPLQ9H1B7 796 aa14.57□□□□□ -0.08
CBWD3-217ENST00000621474 LHX3Q9UBR4 397 aa14.57□□□□□ -0.08
CBWD3-217ENST00000621474 SERGEFQ9UGK8 458 aa14.57□□□□□ -0.08
CBWD3-217ENST00000621474 MBD1Q9UIS9 605 aaPredicted RBP14.57□□□□□ -0.08
CBWD3-217ENST00000621474 PPM1HQ9ULR3 514 aa14.57□□□□□ -0.08
CBWD3-217ENST00000621474 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.57□□□□□ -0.08
CBWD3-217ENST00000621474 WASF2Q9Y6W5 498 aa14.57□□□□□ -0.08
CBWD3-217ENST00000621474 DOCK9Q9BZ29 2069 aa14.56□□□□□ -0.08
CBWD3-217ENST00000621474 IGHV1OR15-9A0A0B4J2B8 117 aa14.56□□□□□ -0.08
CBWD3-217ENST00000621474 BNIP3LO60238 219 aa14.56□□□□□ -0.08
CBWD3-217ENST00000621474 RPP40O75818 363 aaKnown RBP14.56□□□□□ -0.08
CBWD3-217ENST00000621474 IGLV3-19P01714 112 aa14.56□□□□□ -0.08
CBWD3-217ENST00000621474 CNR2P34972 360 aa14.56□□□□□ -0.08
CBWD3-217ENST00000621474 TPMTP51580 245 aa14.56□□□□□ -0.08
CBWD3-217ENST00000621474 CST6Q15828 149 aa14.56□□□□□ -0.08
CBWD3-217ENST00000621474 ZNF776Q68DI1 518 aaPredicted RBP14.56□□□□□ -0.08
CBWD3-217ENST00000621474 ZC3H14Q6PJT7 736 aaKnown RBP14.56□□□□□ -0.08
CBWD3-217ENST00000621474 NPNTQ6UXI9 565 aa14.56□□□□□ -0.08
CBWD3-217ENST00000621474 RCOR2Q8IZ40 523 aa14.56□□□□□ -0.08
CBWD3-217ENST00000621474 SUMF1Q8NBK3 374 aa14.56□□□□□ -0.08
CBWD3-217ENST00000621474 OLFM3Q96PB7 478 aa14.56□□□□□ -0.08
CBWD3-217ENST00000621474 EPC1Q9H2F5 836 aa14.56□□□□□ -0.08
CBWD3-217ENST00000621474 ITM2CQ9NQX7 267 aa14.56□□□□□ -0.08
CBWD3-217ENST00000621474 UBA2Q9UBT2 640 aaPredicted RBP14.56□□□□□ -0.08
CBWD3-217ENST00000621474 AMFRQ9UKV5 643 aa14.56□□□□□ -0.08
CBWD3-217ENST00000621474 CYP8B1Q9UNU6 501 aa14.56□□□□□ -0.08
CBWD3-217ENST00000621474 MUSKO15146 869 aa14.55□□□□□ -0.08
CBWD3-217ENST00000621474 ALOX15BO15296 676 aa14.55□□□□□ -0.08
CBWD3-217ENST00000621474 MID1O15344 667 aa14.55□□□□□ -0.08
CBWD3-217ENST00000621474 PYGMP11217 842 aa14.55□□□□□ -0.08
CBWD3-217ENST00000621474 DRD3P35462 400 aa14.55□□□□□ -0.08
CBWD3-217ENST00000621474 RGRP47804 291 aa14.55□□□□□ -0.08
CBWD3-217ENST00000621474 CCNHP51946 323 aaPredicted RBP14.55□□□□□ -0.08
CBWD3-217ENST00000621474 RWDD2BP57060 319 aa14.55□□□□□ -0.08
CBWD3-217ENST00000621474 SLC10A7Q0GE19 358 aa14.55□□□□□ -0.08
CBWD3-217ENST00000621474 PPP2R5EQ16537 467 aa14.55□□□□□ -0.08
CBWD3-217ENST00000621474 ATXN7L2Q5T6C5 722 aaPredicted RBP14.55□□□□□ -0.08
CBWD3-217ENST00000621474 PLPP6Q8IY26 295 aa14.55□□□□□ -0.08
CBWD3-217ENST00000621474 ATPAF2Q8N5M1 289 aa14.55□□□□□ -0.08
CBWD3-217ENST00000621474 AADATQ8N5Z0 425 aa14.55□□□□□ -0.08
CBWD3-217ENST00000621474 TSEN2Q8NCE0 465 aaKnown RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms