RNA–Protein interactions for RNA: ENST00000621093.4

POLR2J3-221, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene POLR2J3, Length 348 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-221ENST00000621093 PPIDQ08752 370 aaKnown RBP11.13□□□□□ -0.63
POLR2J3-221ENST00000621093 AP1B1Q10567 949 aa11.13□□□□□ -0.63
POLR2J3-221ENST00000621093 PRKD1Q15139 912 aaPredicted RBP11.13□□□□□ -0.63
POLR2J3-221ENST00000621093 KCTD19Q17RG1 926 aaPredicted RBP11.13□□□□□ -0.63
POLR2J3-221ENST00000621093 LONRF2Q1L5Z9 754 aa11.13□□□□□ -0.63
POLR2J3-221ENST00000621093 EOGTQ5NDL2 527 aa11.13□□□□□ -0.63
POLR2J3-221ENST00000621093 ATXN7L2Q5T6C5 722 aaPredicted RBP11.13□□□□□ -0.63
POLR2J3-221ENST00000621093 C22orf39Q6P5X5 142 aa11.13□□□□□ -0.63
POLR2J3-221ENST00000621093 ZSCAN30Q86W11 494 aa11.13□□□□□ -0.63
POLR2J3-221ENST00000621093 CCDC13Q8IYE1 715 aa11.13□□□□□ -0.63
POLR2J3-221ENST00000621093 PGBD5Q8N414 524 aa11.13□□□□□ -0.63
POLR2J3-221ENST00000621093 RASGEF1CQ8N431 466 aa11.13□□□□□ -0.63
POLR2J3-221ENST00000621093 C1orf54Q8WWF1 131 aa11.13□□□□□ -0.63
POLR2J3-221ENST00000621093 ATG4AQ8WYN0 398 aa11.13□□□□□ -0.63
POLR2J3-221ENST00000621093 PBKQ96KB5 322 aa11.13□□□□□ -0.63
POLR2J3-221ENST00000621093 EXOC2Q96KP1 924 aa11.13□□□□□ -0.63
POLR2J3-221ENST00000621093 CAPZA3Q96KX2 299 aa11.13□□□□□ -0.63
POLR2J3-221ENST00000621093 TSGA13Q96PP4 275 aa11.13□□□□□ -0.63
POLR2J3-221ENST00000621093 HHIPQ96QV1 700 aa11.13□□□□□ -0.63
POLR2J3-221ENST00000621093 CEP41Q9BYV8 373 aa11.13□□□□□ -0.63
POLR2J3-221ENST00000621093 TM6SF2Q9BZW4 377 aa11.13□□□□□ -0.63
POLR2J3-221ENST00000621093 CD248Q9HCU0 757 aa11.13□□□□□ -0.63
POLR2J3-221ENST00000621093 PRSS16Q9NQE7 514 aa11.13□□□□□ -0.63
POLR2J3-221ENST00000621093 LHX3Q9UBR4 397 aa11.13□□□□□ -0.63
POLR2J3-221ENST00000621093 CACNA1IQ9P0X4 2223 aa11.13□□□□□ -0.63
POLR2J3-221ENST00000621093 CEP192Q8TEP8 1941 aa11.13□□□□□ -0.63
POLR2J3-221ENST00000621093 ZSCAN5CA6NGD5 496 aaPredicted RBP11.12□□□□□ -0.63
POLR2J3-221ENST00000621093 H7C0C1 242 aa11.12□□□□□ -0.63
POLR2J3-221ENST00000621093 KCNK1O00180 336 aa11.12□□□□□ -0.63
POLR2J3-221ENST00000621093 MATN3O15232 486 aa11.12□□□□□ -0.63
POLR2J3-221ENST00000621093 INSIG1O15503 277 aa11.12□□□□□ -0.63
POLR2J3-221ENST00000621093 GPR37L1O60883 481 aa11.12□□□□□ -0.63
POLR2J3-221ENST00000621093 MX2P20592 715 aa11.12□□□□□ -0.63
POLR2J3-221ENST00000621093 RBL1P28749 1068 aa11.12□□□□□ -0.63
POLR2J3-221ENST00000621093 AVPR2P30518 371 aa11.12□□□□□ -0.63
POLR2J3-221ENST00000621093 GKP32189 559 aa11.12□□□□□ -0.63
POLR2J3-221ENST00000621093 NNMTP40261 264 aa11.12□□□□□ -0.63
POLR2J3-221ENST00000621093 ATP5OP48047 213 aa11.12□□□□□ -0.63
POLR2J3-221ENST00000621093 VASPP50552 380 aaPredicted RBP11.12□□□□□ -0.63
POLR2J3-221ENST00000621093 CLCN6P51797 869 aa11.12□□□□□ -0.63
POLR2J3-221ENST00000621093 MAXP61244 160 aa11.12□□□□□ -0.63
POLR2J3-221ENST00000621093 SLC20A2Q08357 652 aa11.12□□□□□ -0.63
POLR2J3-221ENST00000621093 ZBTB17Q13105 803 aa11.12□□□□□ -0.63
POLR2J3-221ENST00000621093 SNX1Q13596 522 aa11.12□□□□□ -0.63
POLR2J3-221ENST00000621093 LBRQ14739 615 aaKnown RBP11.12□□□□□ -0.63
POLR2J3-221ENST00000621093 PDK1Q15118 436 aa11.12□□□□□ -0.63
POLR2J3-221ENST00000621093 CRY1Q16526 586 aa11.12□□□□□ -0.63
POLR2J3-221ENST00000621093 HNRNPA1L2Q32P51 320 aaKnown RBP11.12□□□□□ -0.63
POLR2J3-221ENST00000621093 C9orf64Q5T6V5 341 aa11.12□□□□□ -0.63
POLR2J3-221ENST00000621093 SDE2Q6IQ49 451 aa11.12□□□□□ -0.63
POLR2J3-221ENST00000621093 TSSK4Q6SA08 328 aa11.12□□□□□ -0.63
POLR2J3-221ENST00000621093 SYT13Q7L8C5 426 aa11.12□□□□□ -0.63
POLR2J3-221ENST00000621093 TRMT11Q7Z4G4 463 aaKnown RBP11.12□□□□□ -0.63
POLR2J3-221ENST00000621093 CACUL1Q86Y37 369 aa11.12□□□□□ -0.63
POLR2J3-221ENST00000621093 STK40Q8N2I9 435 aa11.12□□□□□ -0.63
POLR2J3-221ENST00000621093 SPEM1Q8N4L4 309 aa11.12□□□□□ -0.63
POLR2J3-221ENST00000621093 KDM1BQ8NB78 822 aa11.12□□□□□ -0.63
POLR2J3-221ENST00000621093 DTWD2Q8NBA8 298 aa11.12□□□□□ -0.63
POLR2J3-221ENST00000621093 TSEN2Q8NCE0 465 aaKnown RBP11.12□□□□□ -0.63
POLR2J3-221ENST00000621093 CHST14Q8NCH0 376 aa11.12□□□□□ -0.63
POLR2J3-221ENST00000621093 OR6K2Q8NGY2 324 aa11.12□□□□□ -0.63
POLR2J3-221ENST00000621093 TFB1MQ8WVM0 346 aaKnown RBP11.12□□□□□ -0.63
POLR2J3-221ENST00000621093 MAML1Q92585 1016 aa11.12□□□□□ -0.63
POLR2J3-221ENST00000621093 NSMCE3Q96MG7 304 aa11.12□□□□□ -0.63
POLR2J3-221ENST00000621093 QKIQ96PU8 341 aaKnown RBP eCLIP11.12□□□□□ -0.63
POLR2J3-221ENST00000621093 NT5MQ9NPB1 228 aa11.12□□□□□ -0.63
POLR2J3-221ENST00000621093 SPATA6Q9NWH7 488 aaPredicted RBP11.12□□□□□ -0.63
POLR2J3-221ENST00000621093 SEPT10Q9P0V9 454 aa11.12□□□□□ -0.63
POLR2J3-221ENST00000621093 DNPEPQ9ULA0 475 aa11.12□□□□□ -0.63
POLR2J3-221ENST00000621093 SAR1BQ9Y6B6 198 aa11.12□□□□□ -0.63
POLR2J3-221ENST00000621093 VCANP13611 3396 aa11.12□□□□□ -0.63
POLR2J3-221ENST00000621093 EDDM13A0A1B0GTR0 161 aa11.11□□□□□ -0.63
POLR2J3-221ENST00000621093 TCRBV21S2A2A0A5A6 115 aa11.11□□□□□ -0.63
POLR2J3-221ENST00000621093 PDE2AO00408 941 aaPredicted RBP11.11□□□□□ -0.63
POLR2J3-221ENST00000621093 PPP1R12AO14974 1030 aaPredicted RBP11.11□□□□□ -0.63
POLR2J3-221ENST00000621093 NPC1O15118 1278 aa11.11□□□□□ -0.63
POLR2J3-221ENST00000621093 ATG13O75143 517 aa11.11□□□□□ -0.63
POLR2J3-221ENST00000621093 JCHAINP01591 159 aa11.11□□□□□ -0.63
POLR2J3-221ENST00000621093 HLA-DQB2P05538 268 aa11.11□□□□□ -0.63
POLR2J3-221ENST00000621093 RBP3P10745 1247 aa11.11□□□□□ -0.63
POLR2J3-221ENST00000621093 CCNB1P14635 433 aa11.11□□□□□ -0.63
POLR2J3-221ENST00000621093 TCP1P17987 556 aaKnown RBP11.11□□□□□ -0.63
POLR2J3-221ENST00000621093 PXNP49023 591 aaPredicted RBP11.11□□□□□ -0.63
POLR2J3-221ENST00000621093 COPAP53621 1224 aa11.11□□□□□ -0.63
POLR2J3-221ENST00000621093 GEMIN4P57678 1058 aaKnown RBP11.11□□□□□ -0.63
POLR2J3-221ENST00000621093 RHOAP61586 193 aa11.11□□□□□ -0.63
POLR2J3-221ENST00000621093 DMWDQ09019 674 aa11.11□□□□□ -0.63
POLR2J3-221ENST00000621093 XRCC4Q13426 336 aa11.11□□□□□ -0.63
POLR2J3-221ENST00000621093 CAMK2GQ13555 558 aaPredicted RBP11.11□□□□□ -0.63
POLR2J3-221ENST00000621093 HSF5Q4G112 596 aaPredicted RBP11.11□□□□□ -0.63
POLR2J3-221ENST00000621093 INO80DQ53TQ3 878 aaPredicted RBP11.11□□□□□ -0.63
POLR2J3-221ENST00000621093 SLC45A4Q5BKX6 768 aa11.11□□□□□ -0.63
POLR2J3-221ENST00000621093 CARD16Q5EG05 197 aa11.11□□□□□ -0.63
POLR2J3-221ENST00000621093 TMEM31Q5JXX7 168 aa11.11□□□□□ -0.63
POLR2J3-221ENST00000621093 TMCO4Q5TGY1 634 aa11.11□□□□□ -0.63
POLR2J3-221ENST00000621093 TIGD7Q6NT04 549 aaPredicted RBP11.11□□□□□ -0.63
POLR2J3-221ENST00000621093 DARS2Q6PI48 645 aaKnown RBP11.11□□□□□ -0.63
POLR2J3-221ENST00000621093 DPY19L3Q6ZPD9 716 aa11.11□□□□□ -0.63
POLR2J3-221ENST00000621093 LRRC49Q8IUZ0 686 aa11.11□□□□□ -0.63
POLR2J3-221ENST00000621093 MAML2Q8IZL2 1156 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms