RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 VPS33AQ96AX1 596 aa10.53□□□□□ -0.72
VPS11-207ENST00000620429 GIMAP5Q96F15 307 aa10.53□□□□□ -0.72
VPS11-207ENST00000620429 VMP1Q96GC9 406 aa10.53□□□□□ -0.72
VPS11-207ENST00000620429 METTL2AQ96IZ6 378 aaKnown RBP10.53□□□□□ -0.72
VPS11-207ENST00000620429 PI4K2AQ9BTU6 479 aa10.53□□□□□ -0.72
VPS11-207ENST00000620429 ZNF717Q9BY31 904 aaPredicted RBP10.53□□□□□ -0.72
VPS11-207ENST00000620429 MKRN2Q9H000 416 aaKnown RBP10.53□□□□□ -0.72
VPS11-207ENST00000620429 FAM96AQ9H5X1 160 aa10.53□□□□□ -0.72
VPS11-207ENST00000620429 MYOZ2Q9NPC6 264 aa10.53□□□□□ -0.72
VPS11-207ENST00000620429 HOMER2Q9NSB8 354 aa10.53□□□□□ -0.72
VPS11-207ENST00000620429 RAB20Q9NX57 234 aa10.53□□□□□ -0.72
VPS11-207ENST00000620429 DUS2Q9NX74 493 aaKnown RBP10.53□□□□□ -0.72
VPS11-207ENST00000620429 NOSIPQ9Y314 301 aaKnown RBP10.53□□□□□ -0.72
VPS11-207ENST00000620429 RWDD3Q9Y3V2 267 aa10.53□□□□□ -0.72
VPS11-207ENST00000620429 GOLGA8SH3BPF8 625 aa10.53□□□□□ -0.72
VPS11-207ENST00000620429 SGTAO43765 313 aa10.53□□□□□ -0.72
VPS11-207ENST00000620429 RFPL2O75678 378 aa10.53□□□□□ -0.72
VPS11-207ENST00000620429 BCAS2O75934 225 aaPredicted RBP10.53□□□□□ -0.72
VPS11-207ENST00000620429 SLC34A2O95436 690 aa10.53□□□□□ -0.72
VPS11-207ENST00000620429 TSHRP16473 764 aa10.53□□□□□ -0.72
VPS11-207ENST00000620429 ATF7P17544 494 aaPredicted RBP10.53□□□□□ -0.72
VPS11-207ENST00000620429 GARTP22102 1010 aa10.53□□□□□ -0.72
VPS11-207ENST00000620429 HADHAP40939 763 aa10.53□□□□□ -0.72
VPS11-207ENST00000620429 PIGGQ5H8A4 983 aa10.53□□□□□ -0.72
VPS11-207ENST00000620429 MAMDC4Q6UXC1 1216 aa10.53□□□□□ -0.72
VPS11-207ENST00000620429 UNC5AQ6ZN44 842 aa10.53□□□□□ -0.72
VPS11-207ENST00000620429 KCTD20Q7Z5Y7 419 aa10.53□□□□□ -0.72
VPS11-207ENST00000620429 LACC1Q8IV20 430 aa10.53□□□□□ -0.72
VPS11-207ENST00000620429 KATNAL2Q8IYT4 538 aa10.53□□□□□ -0.72
VPS11-207ENST00000620429 ZNF786Q8N393 782 aa10.53□□□□□ -0.72
VPS11-207ENST00000620429 PARP8Q8N3A8 854 aa10.53□□□□□ -0.72
VPS11-207ENST00000620429 IL31RAQ8NI17 732 aa10.53□□□□□ -0.72
VPS11-207ENST00000620429 FNIP1Q8TF40 1166 aa10.53□□□□□ -0.72
VPS11-207ENST00000620429 CHURC1Q8WUH1 139 aa10.53□□□□□ -0.72
VPS11-207ENST00000620429 ZBED3Q96IU2 234 aaPredicted RBP10.53□□□□□ -0.72
VPS11-207ENST00000620429 C20orf27Q9GZN8 174 aa10.53□□□□□ -0.72
VPS11-207ENST00000620429 TMEM8AQ9HCN3 771 aa10.53□□□□□ -0.72
VPS11-207ENST00000620429 PLLPQ9Y342 182 aa10.53□□□□□ -0.72
VPS11-207ENST00000620429 TEX51A0A1B0GUA7 166 aa10.52□□□□□ -0.72
VPS11-207ENST00000620429 OR5K3A6NET4 321 aa10.52□□□□□ -0.72
VPS11-207ENST00000620429 COPEO14579 308 aa10.52□□□□□ -0.72
VPS11-207ENST00000620429 AURKAO14965 403 aa10.52□□□□□ -0.72
VPS11-207ENST00000620429 SNPHO15079 494 aa10.52□□□□□ -0.72
VPS11-207ENST00000620429 LIASO43766 372 aa10.52□□□□□ -0.72
VPS11-207ENST00000620429 XRCC1P18887 633 aaPredicted RBP10.52□□□□□ -0.72
VPS11-207ENST00000620429 GLRA2P23416 452 aa10.52□□□□□ -0.72
VPS11-207ENST00000620429 CASP3P42574 277 aa10.52□□□□□ -0.72
VPS11-207ENST00000620429 AP2S1P53680 142 aaPredicted RBP10.52□□□□□ -0.72
VPS11-207ENST00000620429 GJA9P57773 515 aa10.52□□□□□ -0.72
VPS11-207ENST00000620429 SNX17Q15036 470 aa10.52□□□□□ -0.72
VPS11-207ENST00000620429 STK11Q15831 433 aa10.52□□□□□ -0.72
VPS11-207ENST00000620429 C16orf89Q6UX73 402 aa10.52□□□□□ -0.72
VPS11-207ENST00000620429 SAMD7Q7Z3H4 446 aa10.52□□□□□ -0.72
VPS11-207ENST00000620429 CAND1Q86VP6 1230 aaKnown RBP10.52□□□□□ -0.72
VPS11-207ENST00000620429 SLC22A16Q86VW1 577 aa10.52□□□□□ -0.72
VPS11-207ENST00000620429 AGBL3Q8NEM8 1001 aa10.52□□□□□ -0.72
VPS11-207ENST00000620429 BHLHE22Q8NFJ8 381 aaPredicted RBP10.52□□□□□ -0.72
VPS11-207ENST00000620429 C11orf70Q9BRQ4 267 aa10.52□□□□□ -0.72
VPS11-207ENST00000620429 MECRQ9BV79 373 aa10.52□□□□□ -0.72
VPS11-207ENST00000620429 DHX33Q9H6R0 707 aaKnown RBP10.52□□□□□ -0.72
VPS11-207ENST00000620429 ZNF395Q9H8N7 513 aaPredicted RBP10.52□□□□□ -0.72
VPS11-207ENST00000620429 DIABLOQ9NR28 239 aa10.52□□□□□ -0.72
VPS11-207ENST00000620429 TCAF1Q9Y4C2 921 aa10.52□□□□□ -0.72
VPS11-207ENST00000620429 DEAF1O75398 565 aaPredicted RBP10.52□□□□□ -0.73
VPS11-207ENST00000620429 IFNB1P01574 187 aa10.52□□□□□ -0.73
VPS11-207ENST00000620429 MAPTP10636 758 aaKnown RBP10.52□□□□□ -0.73
VPS11-207ENST00000620429 JUNBP17275 347 aaPredicted RBP10.52□□□□□ -0.73
VPS11-207ENST00000620429 SSTR1P30872 391 aa10.52□□□□□ -0.73
VPS11-207ENST00000620429 NFX1Q12986 1120 aaKnown RBP10.52□□□□□ -0.73
VPS11-207ENST00000620429 AASDHQ4L235 1098 aaPredicted RBP10.52□□□□□ -0.73
VPS11-207ENST00000620429 ATP13A4Q4VNC1 1196 aa10.52□□□□□ -0.73
VPS11-207ENST00000620429 RNASEH2BQ5TBB1 312 aaKnown RBP10.52□□□□□ -0.73
VPS11-207ENST00000620429 PDPK2PQ6A1A2 396 aa10.52□□□□□ -0.73
VPS11-207ENST00000620429 ARCQ7LC44 396 aa10.52□□□□□ -0.73
VPS11-207ENST00000620429 NUDCD3Q8IVD9 361 aa10.52□□□□□ -0.73
VPS11-207ENST00000620429 FAM109AQ8N4B1 249 aa10.52□□□□□ -0.73
VPS11-207ENST00000620429 PIWIL2Q8TC59 973 aaKnown RBP10.52□□□□□ -0.73
VPS11-207ENST00000620429 FAM84AQ96KN4 292 aa10.52□□□□□ -0.73
VPS11-207ENST00000620429 SLA2Q9H6Q3 261 aa10.52□□□□□ -0.73
VPS11-207ENST00000620429 DNAJC28Q9NX36 388 aa10.52□□□□□ -0.73
VPS11-207ENST00000620429 COQ4Q9Y3A0 265 aa10.52□□□□□ -0.73
VPS11-207ENST00000620429 MATN1P21941 496 aa10.51□□□□□ -0.73
VPS11-207ENST00000620429 RPL10P27635 214 aaKnown RBP10.51□□□□□ -0.73
VPS11-207ENST00000620429 EEF1DP29692 281 aaKnown RBP10.51□□□□□ -0.73
VPS11-207ENST00000620429 SSTR3P32745 418 aaPredicted RBP10.51□□□□□ -0.73
VPS11-207ENST00000620429 VEGFBP49765 207 aa10.51□□□□□ -0.73
VPS11-207ENST00000620429 PRKAA2P54646 552 aa10.51□□□□□ -0.73
VPS11-207ENST00000620429 GTF2BQ00403 316 aa10.51□□□□□ -0.73
VPS11-207ENST00000620429 BBS9Q3SYG4 887 aa10.51□□□□□ -0.73
VPS11-207ENST00000620429 LIN9Q5TKA1 542 aa10.51□□□□□ -0.73
VPS11-207ENST00000620429 PRAMEF18Q5VWM3 479 aa10.51□□□□□ -0.73
VPS11-207ENST00000620429 FAM205BPQ63HN1 556 aa10.51□□□□□ -0.73
VPS11-207ENST00000620429 CDHR3Q6ZTQ4 885 aa10.51□□□□□ -0.73
VPS11-207ENST00000620429 KCTD8Q6ZWB6 473 aa10.51□□□□□ -0.73
VPS11-207ENST00000620429 FKBP9P1Q75LS8 142 aa10.51□□□□□ -0.73
VPS11-207ENST00000620429 FAM83AQ86UY5 434 aa10.51□□□□□ -0.73
VPS11-207ENST00000620429 PNPT1Q8TCS8 783 aaKnown RBP10.51□□□□□ -0.73
VPS11-207ENST00000620429 FIG4Q92562 907 aa10.51□□□□□ -0.73
VPS11-207ENST00000620429 SLC39A13Q96H72 371 aa10.51□□□□□ -0.73
VPS11-207ENST00000620429 TEPSINQ96N21 525 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms