RNA–Protein interactions for RNA: ENST00000620277.4

DKC1-213, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DKC1, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-213ENST00000620277 HARS2P49590 506 aaKnown RBP16.3■□□□□ 0.2
DKC1-213ENST00000620277 MYLK3Q32MK0 819 aa16.3■□□□□ 0.2
DKC1-213ENST00000620277 IFNEQ86WN2 208 aa16.3■□□□□ 0.2
DKC1-213ENST00000620277 TMEM40Q8WWA1 233 aa16.3■□□□□ 0.2
DKC1-213ENST00000620277 OLFM3Q96PB7 478 aa16.3■□□□□ 0.2
DKC1-213ENST00000620277 FAM192AQ9GZU8 254 aa16.3■□□□□ 0.2
DKC1-213ENST00000620277 SMIM28A0A1B0GU29 152 aa16.3■□□□□ 0.2
DKC1-213ENST00000620277 RGSL1A5PLK6 1076 aa16.3■□□□□ 0.2
DKC1-213ENST00000620277 HDAC3O15379 428 aa16.3■□□□□ 0.2
DKC1-213ENST00000620277 MAGEB3O15480 346 aa16.3■□□□□ 0.2
DKC1-213ENST00000620277 DYNC1LI2O43237 492 aaPredicted RBP16.3■□□□□ 0.2
DKC1-213ENST00000620277 FBXO21O94952 628 aa16.3■□□□□ 0.2
DKC1-213ENST00000620277 SLC4A1P02730 911 aa16.3■□□□□ 0.2
DKC1-213ENST00000620277 MT-ND1P03886 318 aa16.3■□□□□ 0.2
DKC1-213ENST00000620277 CNTFP26441 200 aa16.3■□□□□ 0.2
DKC1-213ENST00000620277 ITKQ08881 620 aa16.3■□□□□ 0.2
DKC1-213ENST00000620277 R3HDM1Q15032 1099 aaKnown RBP16.3■□□□□ 0.2
DKC1-213ENST00000620277 SLC25A52Q3SY17 297 aa16.3■□□□□ 0.2
DKC1-213ENST00000620277 AGKQ53H12 422 aa16.3■□□□□ 0.2
DKC1-213ENST00000620277 ZNF789Q5FWF6 425 aa16.3■□□□□ 0.2
DKC1-213ENST00000620277 MTX3Q5HYI7 312 aa16.3■□□□□ 0.2
DKC1-213ENST00000620277 RARS2Q5T160 578 aaKnown RBP16.3■□□□□ 0.2
DKC1-213ENST00000620277 KLHDC10Q6PID8 442 aa16.3■□□□□ 0.2
DKC1-213ENST00000620277 ZFP28Q8NHY6 868 aa16.3■□□□□ 0.2
DKC1-213ENST00000620277 OPTNQ96CV9 577 aa16.3■□□□□ 0.2
DKC1-213ENST00000620277 TNFRSF12AQ9NP84 129 aa16.3■□□□□ 0.2
DKC1-213ENST00000620277 AURKCQ9UQB9 309 aa16.3■□□□□ 0.2
DKC1-213ENST00000620277 PTGDR2Q9Y5Y4 395 aa16.3■□□□□ 0.2
DKC1-213ENST00000620277 RGPD3A6NKT7 1758 aaPredicted RBP16.29■□□□□ 0.2
DKC1-213ENST00000620277 RGPD4Q7Z3J3 1758 aa16.29■□□□□ 0.2
DKC1-213ENST00000620277 CLIC3O95833 236 aa16.29■□□□□ 0.2
DKC1-213ENST00000620277 YBX3P16989 372 aaKnown RBP eCLIP16.29■□□□□ 0.2
DKC1-213ENST00000620277 GABRB3P28472 473 aa16.29■□□□□ 0.2
DKC1-213ENST00000620277 MAGEA6P43360 314 aa16.29■□□□□ 0.2
DKC1-213ENST00000620277 PTPN9P43378 593 aa16.29■□□□□ 0.2
DKC1-213ENST00000620277 CDH13P55290 713 aa16.29■□□□□ 0.2
DKC1-213ENST00000620277 PTK2BQ14289 1009 aa16.29■□□□□ 0.2
DKC1-213ENST00000620277 B3GALNT2Q8NCR0 500 aa16.29■□□□□ 0.2
DKC1-213ENST00000620277 SREK1Q8WXA9 508 aaKnown RBP16.29■□□□□ 0.2
DKC1-213ENST00000620277 TMEM30AQ9NV96 361 aa16.29■□□□□ 0.2
DKC1-213ENST00000620277 TSR3Q9UJK0 312 aaKnown RBP16.29■□□□□ 0.2
DKC1-213ENST00000620277 KIAA1257Q9ULG3 409 aa16.29■□□□□ 0.2
DKC1-213ENST00000620277 CDYLQ9Y232 598 aa16.29■□□□□ 0.2
DKC1-213ENST00000620277 USP3Q9Y6I4 520 aa16.29■□□□□ 0.2
DKC1-213ENST00000620277 GRID2O43424 1007 aa16.29■□□□□ 0.2
DKC1-213ENST00000620277 DLX3O60479 287 aa16.29■□□□□ 0.2
DKC1-213ENST00000620277 RPS12P25398 132 aaKnown RBP16.29■□□□□ 0.2
DKC1-213ENST00000620277 MYBPC1Q00872 1141 aa16.29■□□□□ 0.2
DKC1-213ENST00000620277 OTUD1Q5VV17 481 aaPredicted RBP16.29■□□□□ 0.2
DKC1-213ENST00000620277 STEAP4Q687X5 459 aa16.29■□□□□ 0.2
DKC1-213ENST00000620277 MPHOSPH6Q99547 160 aaKnown RBP16.29■□□□□ 0.2
DKC1-213ENST00000620277 TKTL2Q9H0I9 626 aa16.29■□□□□ 0.2
DKC1-213ENST00000620277 PSMD13Q9UNM6 376 aa16.29■□□□□ 0.2
DKC1-213ENST00000620277 COPG1Q9Y678 874 aaKnown RBP16.29■□□□□ 0.2
DKC1-213ENST00000620277 RLFQ13129 1914 aa16.29■□□□□ 0.2
DKC1-213ENST00000620277 KCNA5P22460 613 aa16.28■□□□□ 0.2
DKC1-213ENST00000620277 YWHAQP27348 245 aa16.28■□□□□ 0.2
DKC1-213ENST00000620277 MAXP61244 160 aa16.28■□□□□ 0.2
DKC1-213ENST00000620277 PRPSAP1Q14558 356 aa16.28■□□□□ 0.2
DKC1-213ENST00000620277 LRRC8EQ6NSJ5 796 aa16.28■□□□□ 0.2
DKC1-213ENST00000620277 TRIML2Q8N7C3 387 aa16.28■□□□□ 0.2
DKC1-213ENST00000620277 ACMSDQ8TDX5 336 aa16.28■□□□□ 0.2
DKC1-213ENST00000620277 MKS1Q9NXB0 559 aa16.28■□□□□ 0.2
DKC1-213ENST00000620277 MYBPHLA2RUH7 354 aa16.28■□□□□ 0.2
DKC1-213ENST00000620277 SAC3D1A6NKF1 404 aa16.28■□□□□ 0.2
DKC1-213ENST00000620277 E7ENX8 843 aa16.28■□□□□ 0.2
DKC1-213ENST00000620277 PFDN1O60925 122 aa16.28■□□□□ 0.2
DKC1-213ENST00000620277 CES1P23141 567 aa16.28■□□□□ 0.2
DKC1-213ENST00000620277 ADRA1BP35368 520 aa16.28■□□□□ 0.2
DKC1-213ENST00000620277 GALK1P51570 392 aa16.28■□□□□ 0.2
DKC1-213ENST00000620277 CCDC153Q494R4 210 aa16.28■□□□□ 0.2
DKC1-213ENST00000620277 ARRDC4Q8NCT1 418 aa16.28■□□□□ 0.2
DKC1-213ENST00000620277 LPPQ93052 612 aa16.28■□□□□ 0.2
DKC1-213ENST00000620277 RTKNQ9BST9 563 aa16.28■□□□□ 0.2
DKC1-213ENST00000620277 DCUN1D5Q9BTE7 237 aa16.28■□□□□ 0.2
DKC1-213ENST00000620277 VPS33BQ9H267 617 aa16.28■□□□□ 0.2
DKC1-213ENST00000620277 POMKQ9H5K3 350 aa16.28■□□□□ 0.2
DKC1-213ENST00000620277 NOL11Q9H8H0 719 aaKnown RBP16.28■□□□□ 0.2
DKC1-213ENST00000620277 PLEKHA5Q9HAU0 1116 aa16.28■□□□□ 0.2
DKC1-213ENST00000620277 GPRC5DQ9NZD1 345 aa16.28■□□□□ 0.2
DKC1-213ENST00000620277 OR12D3Q9UGF7 316 aa16.28■□□□□ 0.2
DKC1-213ENST00000620277 EGFL7Q9UHF1 273 aa16.28■□□□□ 0.2
DKC1-213ENST00000620277 MATN2O00339 956 aa16.27■□□□□ 0.2
DKC1-213ENST00000620277 SBK3P0C264 359 aa16.27■□□□□ 0.2
DKC1-213ENST00000620277 SMIM18P0DKX4 95 aa16.27■□□□□ 0.2
DKC1-213ENST00000620277 CASP2P42575 452 aa16.27■□□□□ 0.2
DKC1-213ENST00000620277 SNAPC2Q13487 334 aa16.27■□□□□ 0.2
DKC1-213ENST00000620277 HABP4Q5JVS0 413 aaKnown RBP16.27■□□□□ 0.2
DKC1-213ENST00000620277 ZNF470Q6ECI4 717 aa16.27■□□□□ 0.2
DKC1-213ENST00000620277 CPNE9Q8IYJ1 553 aa16.27■□□□□ 0.2
DKC1-213ENST00000620277 FICDQ9BVA6 458 aa16.27■□□□□ 0.2
DKC1-213ENST00000620277 COQ10BQ9H8M1 238 aa16.27■□□□□ 0.2
DKC1-213ENST00000620277 OXSMQ9NWU1 459 aa16.27■□□□□ 0.2
DKC1-213ENST00000620277 STK39Q9UEW8 545 aa16.27■□□□□ 0.2
DKC1-213ENST00000620277 GPC4O75487 556 aa16.27■□□□□ 0.2
DKC1-213ENST00000620277 TIPRLO75663 272 aa16.27■□□□□ 0.2
DKC1-213ENST00000620277 ME2P23368 584 aa16.27■□□□□ 0.2
DKC1-213ENST00000620277 MAP7Q14244 749 aa16.27■□□□□ 0.2
DKC1-213ENST00000620277 SPANXN3Q5MJ09 141 aa16.27■□□□□ 0.2
DKC1-213ENST00000620277 MARCH8Q5T0T0 291 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms