RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 WDFY3Q8IZQ1 3526 aa5.38□□□□□ -1.55
SHMT1-211ENST00000618902 ABCA7Q8IZY2 2146 aa5.38□□□□□ -1.55
SHMT1-211ENST00000618902 CABIN1Q9Y6J0 2220 aa5.38□□□□□ -1.55
SHMT1-211ENST00000618902 ANKRD11Q6UB99 2663 aaPredicted RBP5.37□□□□□ -1.55
SHMT1-211ENST00000618902 A0A0D9SEW6 157 aa5.37□□□□□ -1.55
SHMT1-211ENST00000618902 C3orf70A6NLC5 250 aaPredicted RBP5.37□□□□□ -1.55
SHMT1-211ENST00000618902 WASH3PC4AMC7 463 aa5.37□□□□□ -1.55
SHMT1-211ENST00000618902 F5H5T6 163 aa5.37□□□□□ -1.55
SHMT1-211ENST00000618902 SGK1O00141 431 aa5.37□□□□□ -1.55
SHMT1-211ENST00000618902 MYO1FO00160 1098 aa5.37□□□□□ -1.55
SHMT1-211ENST00000618902 BUB1O43683 1085 aa5.37□□□□□ -1.55
SHMT1-211ENST00000618902 SYNCRIPO60506 623 aaKnown RBP5.37□□□□□ -1.55
SHMT1-211ENST00000618902 SNAP91O60641 907 aa5.37□□□□□ -1.55
SHMT1-211ENST00000618902 RNASEH1O60930 286 aaKnown RBP5.37□□□□□ -1.55
SHMT1-211ENST00000618902 SRGAP2O75044 1071 aa5.37□□□□□ -1.55
SHMT1-211ENST00000618902 CLDN11O75508 207 aa5.37□□□□□ -1.55
SHMT1-211ENST00000618902 SYF2O95926 243 aaKnown RBP5.37□□□□□ -1.55
SHMT1-211ENST00000618902 IGLV3-19P01714 112 aa5.37□□□□□ -1.55
SHMT1-211ENST00000618902 SRPRAP08240 638 aaKnown RBP5.37□□□□□ -1.55
SHMT1-211ENST00000618902 DLDP09622 509 aaKnown RBP5.37□□□□□ -1.55
SHMT1-211ENST00000618902 ZNF806P0C7X5 589 aa5.37□□□□□ -1.55
SHMT1-211ENST00000618902 PABPC1P11940 636 aaKnown RBP5.37□□□□□ -1.55
SHMT1-211ENST00000618902 GOT1P17174 413 aa5.37□□□□□ -1.55
SHMT1-211ENST00000618902 COMTP21964 271 aa5.37□□□□□ -1.55
SHMT1-211ENST00000618902 GLDCP23378 1020 aa5.37□□□□□ -1.55
SHMT1-211ENST00000618902 MAN1A1P33908 653 aa5.37□□□□□ -1.55
SHMT1-211ENST00000618902 PCK1P35558 622 aa5.37□□□□□ -1.55
SHMT1-211ENST00000618902 ACVRL1P37023 503 aa5.37□□□□□ -1.55
SHMT1-211ENST00000618902 CSKP41240 450 aa5.37□□□□□ -1.55
SHMT1-211ENST00000618902 PI4KAP42356 2102 aa5.37□□□□□ -1.55
SHMT1-211ENST00000618902 WASP42768 502 aa5.37□□□□□ -1.55
SHMT1-211ENST00000618902 TNNT3P45378 269 aaPredicted RBP5.37□□□□□ -1.55
SHMT1-211ENST00000618902 PLK1P53350 603 aa5.37□□□□□ -1.55
SHMT1-211ENST00000618902 HADHBP55084 474 aaKnown RBP5.37□□□□□ -1.55
SHMT1-211ENST00000618902 NAP1L1P55209 391 aaKnown RBP5.37□□□□□ -1.55
SHMT1-211ENST00000618902 SEC13P55735 322 aa5.37□□□□□ -1.55
SHMT1-211ENST00000618902 DMWDQ09019 674 aa5.37□□□□□ -1.55
SHMT1-211ENST00000618902 MMRN1Q13201 1228 aa5.37□□□□□ -1.55
SHMT1-211ENST00000618902 DPYSQ14117 519 aa5.37□□□□□ -1.55
SHMT1-211ENST00000618902 PIGHQ14442 188 aaPredicted RBP5.37□□□□□ -1.55
SHMT1-211ENST00000618902 PUM1Q14671 1186 aaKnown RBP eCLIP5.37□□□□□ -1.55
SHMT1-211ENST00000618902 MESDQ14696 234 aa5.37□□□□□ -1.55
SHMT1-211ENST00000618902 RPS6KA1Q15418 735 aa5.37□□□□□ -1.55
SHMT1-211ENST00000618902 PTPRNQ16849 979 aa5.37□□□□□ -1.55
SHMT1-211ENST00000618902 ARL13BQ3SXY8 428 aa5.37□□□□□ -1.55
SHMT1-211ENST00000618902 C2orf27AQ580R0 203 aa5.37□□□□□ -1.55
SHMT1-211ENST00000618902 FAM182AQ5T1J6 154 aa5.37□□□□□ -1.55
SHMT1-211ENST00000618902 SYCP2LQ5T4T6 812 aa5.37□□□□□ -1.55
SHMT1-211ENST00000618902 MEI1Q5TIA1 1274 aa5.37□□□□□ -1.55
SHMT1-211ENST00000618902 C8orf74Q6P047 294 aa5.37□□□□□ -1.55
SHMT1-211ENST00000618902 TMEM92Q6UXU6 159 aa5.37□□□□□ -1.55
SHMT1-211ENST00000618902 CEP68Q76N32 757 aa5.37□□□□□ -1.55
SHMT1-211ENST00000618902 CHST9Q7L1S5 443 aa5.37□□□□□ -1.55
SHMT1-211ENST00000618902 ASCL5Q7RTU5 278 aa5.37□□□□□ -1.55
SHMT1-211ENST00000618902 SLFN11Q7Z7L1 901 aa5.37□□□□□ -1.55
SHMT1-211ENST00000618902 SRLQ86TD4 932 aa5.37□□□□□ -1.55
SHMT1-211ENST00000618902 KBTBD6Q86V97 674 aa5.37□□□□□ -1.55
SHMT1-211ENST00000618902 PSTKQ8IV42 348 aaKnown RBP5.37□□□□□ -1.55
SHMT1-211ENST00000618902 CHPFQ8IZ52 775 aa5.37□□□□□ -1.55
SHMT1-211ENST00000618902 IQCKQ8N0W5 287 aa5.37□□□□□ -1.55
SHMT1-211ENST00000618902 CARNMT1Q8N4J0 409 aa5.37□□□□□ -1.55
SHMT1-211ENST00000618902 CCDC33Q8N5R6 958 aa5.37□□□□□ -1.55
SHMT1-211ENST00000618902 ALLCQ8N6M5 410 aa5.37□□□□□ -1.55
SHMT1-211ENST00000618902 LRRC57Q8N9N7 239 aa5.37□□□□□ -1.55
SHMT1-211ENST00000618902 NOA1Q8NC60 698 aaKnown RBP5.37□□□□□ -1.55
SHMT1-211ENST00000618902 OR7D4Q8NG98 312 aa5.37□□□□□ -1.55
SHMT1-211ENST00000618902 NETO1Q8TDF5 533 aa5.37□□□□□ -1.55
SHMT1-211ENST00000618902 CYB5D2Q8WUJ1 264 aa5.37□□□□□ -1.55
SHMT1-211ENST00000618902 RAPGEF5Q92565 580 aa5.37□□□□□ -1.55
SHMT1-211ENST00000618902 KRT35Q92764 455 aa5.37□□□□□ -1.55
SHMT1-211ENST00000618902 TTC17Q96AE7 1141 aa5.37□□□□□ -1.55
SHMT1-211ENST00000618902 VOPP1Q96AW1 172 aa5.37□□□□□ -1.55
SHMT1-211ENST00000618902 ERLEC1Q96DZ1 483 aa5.37□□□□□ -1.55
SHMT1-211ENST00000618902 MYO19Q96H55 970 aa5.37□□□□□ -1.55
SHMT1-211ENST00000618902 MRGPRX3Q96LB0 322 aa5.37□□□□□ -1.55
SHMT1-211ENST00000618902 TACO1Q9BSH4 297 aaKnown RBP5.37□□□□□ -1.55
SHMT1-211ENST00000618902 RTKNQ9BST9 563 aa5.37□□□□□ -1.55
SHMT1-211ENST00000618902 CAPS2Q9BXY5 557 aa5.37□□□□□ -1.55
SHMT1-211ENST00000618902 ZDHHC5Q9C0B5 715 aa5.37□□□□□ -1.55
SHMT1-211ENST00000618902 DUSP15Q9H1R2 295 aaPredicted RBP5.37□□□□□ -1.55
SHMT1-211ENST00000618902 KDM4CQ9H3R0 1056 aa5.37□□□□□ -1.55
SHMT1-211ENST00000618902 MTG2Q9H4K7 406 aa5.37□□□□□ -1.55
SHMT1-211ENST00000618902 DHX35Q9H5Z1 703 aaKnown RBP5.37□□□□□ -1.55
SHMT1-211ENST00000618902 ZWILCHQ9H900 591 aa5.37□□□□□ -1.55
SHMT1-211ENST00000618902 PCDH18Q9HCL0 1135 aa5.37□□□□□ -1.55
SHMT1-211ENST00000618902 VPS45Q9NRW7 570 aa5.37□□□□□ -1.55
SHMT1-211ENST00000618902 KIAA1522Q9P206 1035 aaPredicted RBP5.37□□□□□ -1.55
SHMT1-211ENST00000618902 NCDNQ9UBB6 729 aa5.37□□□□□ -1.55
SHMT1-211ENST00000618902 OR12D3Q9UGF7 316 aa5.37□□□□□ -1.55
SHMT1-211ENST00000618902 SUSD2Q9UGT4 822 aa5.37□□□□□ -1.55
SHMT1-211ENST00000618902 IP6K2Q9UHH9 426 aa5.37□□□□□ -1.55
SHMT1-211ENST00000618902 EVLQ9UI08 416 aaPredicted RBP5.37□□□□□ -1.55
SHMT1-211ENST00000618902 USP18Q9UMW8 372 aa5.37□□□□□ -1.55
SHMT1-211ENST00000618902 AP4E1Q9UPM8 1137 aa5.37□□□□□ -1.55
SHMT1-211ENST00000618902 TBC1D30Q9Y2I9 924 aa5.37□□□□□ -1.55
SHMT1-211ENST00000618902 ACTL7AQ9Y615 435 aa5.37□□□□□ -1.55
SHMT1-211ENST00000618902 MUC22E2RYF6 1773 aaPredicted RBP5.37□□□□□ -1.55
SHMT1-211ENST00000618902 CKAP5Q14008 2032 aa5.36□□□□□ -1.55
SHMT1-211ENST00000618902 KNTC1P50748 2209 aa5.36□□□□□ -1.55
SHMT1-211ENST00000618902 A0A1B0GVM2 712 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms