RNA–Protein interactions for RNA: ENST00000618562.1

VEGFC-202, Transcript of vascular endothelial growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VEGFC, Length 2,064 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-202ENST00000618562 SLC39A8Q9C0K1 460 aa25.81■■□□□ 1.72
VEGFC-202ENST00000618562 ZBTB24O43167 697 aaPredicted RBP25.8■■□□□ 1.72
VEGFC-202ENST00000618562 CCDC22O60826 627 aa25.8■■□□□ 1.72
VEGFC-202ENST00000618562 DNAJB2P25686 324 aa25.8■■□□□ 1.72
VEGFC-202ENST00000618562 CD68P34810 354 aaPredicted RBP25.8■■□□□ 1.72
VEGFC-202ENST00000618562 TMPRSS15P98073 1019 aa25.8■■□□□ 1.72
VEGFC-202ENST00000618562 RING1Q06587 406 aa25.8■■□□□ 1.72
VEGFC-202ENST00000618562 ZNF33AQ06730 810 aa25.8■■□□□ 1.72
VEGFC-202ENST00000618562 BST1Q10588 318 aa25.8■■□□□ 1.72
VEGFC-202ENST00000618562 RAB33AQ14088 237 aa25.8■■□□□ 1.72
VEGFC-202ENST00000618562 KRT72Q14CN4 511 aa25.8■■□□□ 1.72
VEGFC-202ENST00000618562 AFMIDQ63HM1 303 aa25.8■■□□□ 1.72
VEGFC-202ENST00000618562 YIPF1Q9Y548 306 aa25.8■■□□□ 1.72
VEGFC-202ENST00000618562 WASH4PA8MWX3 477 aa25.79■■□□□ 1.72
VEGFC-202ENST00000618562 MYL2P10916 166 aa25.79■■□□□ 1.72
VEGFC-202ENST00000618562 COG7P83436 770 aa25.79■■□□□ 1.72
VEGFC-202ENST00000618562 OCRLQ01968 901 aa25.79■■□□□ 1.72
VEGFC-202ENST00000618562 TEX44Q53QW1 395 aa25.79■■□□□ 1.72
VEGFC-202ENST00000618562 WASHC2DQ5SRD0 308 aa25.79■■□□□ 1.72
VEGFC-202ENST00000618562 CASC4Q6P4E1 433 aa25.79■■□□□ 1.72
VEGFC-202ENST00000618562 KYAT3Q6YP21 454 aaKnown RBP25.79■■□□□ 1.72
VEGFC-202ENST00000618562 NUDCD3Q8IVD9 361 aa25.79■■□□□ 1.72
VEGFC-202ENST00000618562 DDX51Q8N8A6 666 aaKnown RBP eCLIP25.79■■□□□ 1.72
VEGFC-202ENST00000618562 ZNF512Q96ME7 567 aaPredicted RBP25.79■■□□□ 1.72
VEGFC-202ENST00000618562 AGAP3Q96P47 875 aa25.79■■□□□ 1.72
VEGFC-202ENST00000618562 TSGA13Q96PP4 275 aa25.79■■□□□ 1.72
VEGFC-202ENST00000618562 MECRQ9BV79 373 aa25.79■■□□□ 1.72
VEGFC-202ENST00000618562 ACCSLQ4AC99 568 aa25.79■■□□□ 1.72
VEGFC-202ENST00000618562 SNX30Q5VWJ9 437 aa25.79■■□□□ 1.72
VEGFC-202ENST00000618562 OVCA2Q8WZ82 227 aa25.79■■□□□ 1.72
VEGFC-202ENST00000618562 NSL1Q96IY1 281 aa25.79■■□□□ 1.72
VEGFC-202ENST00000618562 VAT1Q99536 393 aa25.79■■□□□ 1.72
VEGFC-202ENST00000618562 TRHDEQ9UKU6 1024 aa25.79■■□□□ 1.72
VEGFC-202ENST00000618562 ALPK3Q96L96 1907 aa25.79■■□□□ 1.72
VEGFC-202ENST00000618562 CARNS1A5YM72 827 aa25.78■■□□□ 1.72
VEGFC-202ENST00000618562 ZNF840PA6NDX5 716 aa25.78■■□□□ 1.72
VEGFC-202ENST00000618562 ZBBXA8MT70 800 aa25.78■■□□□ 1.72
VEGFC-202ENST00000618562 BPGMP07738 259 aa25.78■■□□□ 1.72
VEGFC-202ENST00000618562 CHI3L2Q15782 390 aa25.78■■□□□ 1.72
VEGFC-202ENST00000618562 ATPAF2Q8N5M1 289 aa25.78■■□□□ 1.72
VEGFC-202ENST00000618562 PDZD8Q8NEN9 1154 aa25.78■■□□□ 1.72
VEGFC-202ENST00000618562 GIMAP7Q8NHV1 300 aa25.78■■□□□ 1.72
VEGFC-202ENST00000618562 ARNTL2Q8WYA1 636 aa25.78■■□□□ 1.72
VEGFC-202ENST00000618562 GBA3Q9H227 469 aa25.78■■□□□ 1.72
VEGFC-202ENST00000618562 PPARGC1AQ9UBK2 798 aaKnown RBP25.78■■□□□ 1.72
VEGFC-202ENST00000618562 IGLV3-10A0A075B6K4 115 aa25.78■■□□□ 1.72
VEGFC-202ENST00000618562 MAFKO60675 156 aa25.78■■□□□ 1.72
VEGFC-202ENST00000618562 LINC00271P0C7V0 271 aa25.78■■□□□ 1.72
VEGFC-202ENST00000618562 CALB2P22676 271 aa25.78■■□□□ 1.72
VEGFC-202ENST00000618562 CCNCP24863 283 aa25.78■■□□□ 1.72
VEGFC-202ENST00000618562 PPM1AP35813 382 aa25.78■■□□□ 1.72
VEGFC-202ENST00000618562 CRYMQ14894 314 aa25.78■■□□□ 1.72
VEGFC-202ENST00000618562 RAP1GAP2Q684P5 730 aa25.78■■□□□ 1.72
VEGFC-202ENST00000618562 TLDC1Q6P9B6 456 aa25.78■■□□□ 1.72
VEGFC-202ENST00000618562 UBE2Q1Q7Z7E8 422 aa25.78■■□□□ 1.72
VEGFC-202ENST00000618562 MYRFLQ96LU7 910 aa25.78■■□□□ 1.72
VEGFC-202ENST00000618562 TEKT5Q96M29 485 aa25.78■■□□□ 1.72
VEGFC-202ENST00000618562 NOL6Q9H6R4 1146 aaKnown RBP25.78■■□□□ 1.72
VEGFC-202ENST00000618562 FBXO6Q9NRD1 293 aaPredicted RBP25.78■■□□□ 1.72
VEGFC-202ENST00000618562 ARL8BQ9NVJ2 186 aa25.78■■□□□ 1.72
VEGFC-202ENST00000618562 SNNO75324 88 aaPredicted RBP25.77■■□□□ 1.72
VEGFC-202ENST00000618562 JCHAINP01591 159 aa25.77■■□□□ 1.72
VEGFC-202ENST00000618562 MGAT1P26572 445 aa25.77■■□□□ 1.72
VEGFC-202ENST00000618562 ALDH1A3P47895 512 aa25.77■■□□□ 1.72
VEGFC-202ENST00000618562 FBXL22Q6P050 247 aa25.77■■□□□ 1.72
VEGFC-202ENST00000618562 PACS1Q6VY07 963 aa25.77■■□□□ 1.72
VEGFC-202ENST00000618562 IGSF8Q969P0 613 aa25.77■■□□□ 1.72
VEGFC-202ENST00000618562 CDK5RAP1Q96SZ6 601 aaKnown RBP25.77■■□□□ 1.72
VEGFC-202ENST00000618562 BTBD10Q9BSF8 475 aa25.77■■□□□ 1.72
VEGFC-202ENST00000618562 ZYG11BQ9C0D3 744 aa25.77■■□□□ 1.72
VEGFC-202ENST00000618562 RNPEPL1Q9HAU8 725 aa25.77■■□□□ 1.72
VEGFC-202ENST00000618562 MRPL17Q9NRX2 175 aaKnown RBP25.77■■□□□ 1.72
VEGFC-202ENST00000618562 DNMT3LQ9UJW3 386 aa25.77■■□□□ 1.72
VEGFC-202ENST00000618562 CNTN5O94779 1100 aa25.76■■□□□ 1.71
VEGFC-202ENST00000618562 GJB5O95377 273 aa25.76■■□□□ 1.71
VEGFC-202ENST00000618562 ATP5BP06576 529 aaKnown RBP25.76■■□□□ 1.71
VEGFC-202ENST00000618562 ATP5C1P36542 298 aaKnown RBP25.76■■□□□ 1.71
VEGFC-202ENST00000618562 KCNQ1P51787 676 aa25.76■■□□□ 1.71
VEGFC-202ENST00000618562 CCNG1P51959 295 aa25.76■■□□□ 1.71
VEGFC-202ENST00000618562 ALFQ53S48 1182 aa25.76■■□□□ 1.71
VEGFC-202ENST00000618562 TFAP2DQ7Z6R9 452 aa25.76■■□□□ 1.71
VEGFC-202ENST00000618562 CNTD1Q8N815 330 aa25.76■■□□□ 1.71
VEGFC-202ENST00000618562 ZNF419Q96HQ0 510 aaPredicted RBP25.76■■□□□ 1.71
VEGFC-202ENST00000618562 HBS1LQ9Y450 684 aaKnown RBP25.76■■□□□ 1.71
VEGFC-202ENST00000618562 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP25.76■■□□□ 1.71
VEGFC-202ENST00000618562 FAM237BA0A1B0GVD1 139 aa25.76■■□□□ 1.71
VEGFC-202ENST00000618562 HSPA1AP0DMV8 641 aaKnown RBP25.76■■□□□ 1.71
VEGFC-202ENST00000618562 HSPA1BP0DMV9 641 aaKnown RBP25.76■■□□□ 1.71
VEGFC-202ENST00000618562 RHOQP17081 205 aa25.76■■□□□ 1.71
VEGFC-202ENST00000618562 NFKB1P19838 968 aa25.76■■□□□ 1.71
VEGFC-202ENST00000618562 KPNA1P52294 538 aaPredicted RBP25.76■■□□□ 1.71
VEGFC-202ENST00000618562 SESN2P58004 480 aaPredicted RBP25.76■■□□□ 1.71
VEGFC-202ENST00000618562 HTRA4P83105 476 aaPredicted RBP25.76■■□□□ 1.71
VEGFC-202ENST00000618562 NADSYN1Q6IA69 706 aa25.76■■□□□ 1.71
VEGFC-202ENST00000618562 NSMCE1Q8WV22 266 aa25.76■■□□□ 1.71
VEGFC-202ENST00000618562 PIH1D1Q9NWS0 290 aaKnown RBP25.76■■□□□ 1.71
VEGFC-202ENST00000618562 ANAPC1Q9H1A4 1944 aa25.76■■□□□ 1.71
VEGFC-202ENST00000618562 FCHO1O14526 889 aa25.75■■□□□ 1.71
VEGFC-202ENST00000618562 LILRB3O75022 631 aa25.75■■□□□ 1.71
VEGFC-202ENST00000618562 PEX11AO75192 247 aa25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms