RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 FAM46CQ5VWP2 391 aa11.31□□□□□ -0.6
CCDC144B-208ENST00000618081 LIN54Q6MZP7 749 aa11.31□□□□□ -0.6
CCDC144B-208ENST00000618081 WDR93Q6P2C0 686 aa11.31□□□□□ -0.6
CCDC144B-208ENST00000618081 USP49Q70CQ1 688 aa11.31□□□□□ -0.6
CCDC144B-208ENST00000618081 ELL3Q9HB65 397 aaPredicted RBP11.31□□□□□ -0.6
CCDC144B-208ENST00000618081 POLLQ9UGP5 575 aa11.31□□□□□ -0.6
CCDC144B-208ENST00000618081 TRIM17Q9Y577 477 aa11.31□□□□□ -0.6
CCDC144B-208ENST00000618081 MCIDASD6RGH6 385 aa11.31□□□□□ -0.6
CCDC144B-208ENST00000618081 ZCCHC18P0CG32 403 aa11.31□□□□□ -0.6
CCDC144B-208ENST00000618081 ALDH5A1P51649 535 aaPredicted RBP11.31□□□□□ -0.6
CCDC144B-208ENST00000618081 SLC6A3Q01959 620 aa11.31□□□□□ -0.6
CCDC144B-208ENST00000618081 ITPK1Q13572 414 aa11.31□□□□□ -0.6
CCDC144B-208ENST00000618081 FIGNQ5HY92 759 aa11.31□□□□□ -0.6
CCDC144B-208ENST00000618081 C16orf59Q7L2K0 433 aa11.31□□□□□ -0.6
CCDC144B-208ENST00000618081 MCOLN2Q8IZK6 566 aa11.31□□□□□ -0.6
CCDC144B-208ENST00000618081 SIX5Q8N196 739 aa11.31□□□□□ -0.6
CCDC144B-208ENST00000618081 KBTBD4Q9NVX7 518 aa11.31□□□□□ -0.6
CCDC144B-208ENST00000618081 LRPAP1P30533 357 aa11.31□□□□□ -0.6
CCDC144B-208ENST00000618081 CHKAP35790 457 aa11.31□□□□□ -0.6
CCDC144B-208ENST00000618081 TROAPQ12815 778 aa11.31□□□□□ -0.6
CCDC144B-208ENST00000618081 HEATR4Q86WZ0 1026 aa11.31□□□□□ -0.6
CCDC144B-208ENST00000618081 MRTO4Q9UKD2 239 aaKnown RBP11.31□□□□□ -0.6
CCDC144B-208ENST00000618081 TECPR2O15040 1411 aa11.31□□□□□ -0.6
CCDC144B-208ENST00000618081 CEP170BQ9Y4F5 1589 aaPredicted RBP11.31□□□□□ -0.6
CCDC144B-208ENST00000618081 INHBEP58166 350 aa11.31□□□□□ -0.6
CCDC144B-208ENST00000618081 ACVR2BQ13705 512 aa11.31□□□□□ -0.6
CCDC144B-208ENST00000618081 PJA1Q8NG27 643 aa11.31□□□□□ -0.6
CCDC144B-208ENST00000618081 SYTL5Q8TDW5 730 aaPredicted RBP11.31□□□□□ -0.6
CCDC144B-208ENST00000618081 RSPH9Q9H1X1 276 aaPredicted RBP11.31□□□□□ -0.6
CCDC144B-208ENST00000618081 RIC1Q4ADV7 1423 aa11.31□□□□□ -0.6
CCDC144B-208ENST00000618081 A0A096LPK6 155 aa11.31□□□□□ -0.6
CCDC144B-208ENST00000618081 TAF4O00268 1085 aa11.31□□□□□ -0.6
CCDC144B-208ENST00000618081 VAPBO95292 243 aa11.31□□□□□ -0.6
CCDC144B-208ENST00000618081 IL1R1P14778 569 aa11.31□□□□□ -0.6
CCDC144B-208ENST00000618081 MZT2BQ6NZ67 158 aa11.31□□□□□ -0.6
CCDC144B-208ENST00000618081 SV2AQ7L0J3 742 aa11.31□□□□□ -0.6
CCDC144B-208ENST00000618081 TMPRSS6Q8IU80 811 aa11.31□□□□□ -0.6
CCDC144B-208ENST00000618081 TRPV3Q8NET8 790 aa11.31□□□□□ -0.6
CCDC144B-208ENST00000618081 CLIP3Q96DZ5 547 aa11.31□□□□□ -0.6
CCDC144B-208ENST00000618081 TEKT5Q96M29 485 aa11.31□□□□□ -0.6
CCDC144B-208ENST00000618081 CNPPD1Q9BV87 410 aa11.31□□□□□ -0.6
CCDC144B-208ENST00000618081 ZNF510Q9Y2H8 683 aa11.31□□□□□ -0.6
CCDC144B-208ENST00000618081 LACTBL1A8MY62 500 aa11.3□□□□□ -0.6
CCDC144B-208ENST00000618081 KHDRBS3O75525 346 aaKnown RBP11.3□□□□□ -0.6
CCDC144B-208ENST00000618081 CCNDBP1O95273 360 aa11.3□□□□□ -0.6
CCDC144B-208ENST00000618081 ADH1CP00326 375 aa11.3□□□□□ -0.6
CCDC144B-208ENST00000618081 TPP2P29144 1249 aaPredicted RBP11.3□□□□□ -0.6
CCDC144B-208ENST00000618081 LGALS3BPQ08380 585 aa11.3□□□□□ -0.6
CCDC144B-208ENST00000618081 FAM171BQ6P995 826 aa11.3□□□□□ -0.6
CCDC144B-208ENST00000618081 DET1Q7L5Y6 550 aa11.3□□□□□ -0.6
CCDC144B-208ENST00000618081 CCDC185Q8N715 623 aa11.3□□□□□ -0.6
CCDC144B-208ENST00000618081 STAG3L4Q8TBR4 150 aa11.3□□□□□ -0.6
CCDC144B-208ENST00000618081 MYCBPAPQ8TBZ2 947 aa11.3□□□□□ -0.6
CCDC144B-208ENST00000618081 COQ7Q99807 217 aa11.3□□□□□ -0.6
CCDC144B-208ENST00000618081 CDK16Q00536 496 aa11.3□□□□□ -0.6
CCDC144B-208ENST00000618081 HYIQ5T013 277 aa11.3□□□□□ -0.6
CCDC144B-208ENST00000618081 ADAM32Q8TC27 787 aa11.3□□□□□ -0.6
CCDC144B-208ENST00000618081 ZNF606Q8WXB4 792 aa11.3□□□□□ -0.6
CCDC144B-208ENST00000618081 POP5Q969H6 163 aaKnown RBP11.3□□□□□ -0.6
CCDC144B-208ENST00000618081 ZNF558Q96NG5 402 aa11.3□□□□□ -0.6
CCDC144B-208ENST00000618081 PRRG4Q9BZD6 226 aa11.3□□□□□ -0.6
CCDC144B-208ENST00000618081 RHBGQ9H310 441 aa11.3□□□□□ -0.6
CCDC144B-208ENST00000618081 CYLDQ9NQC7 956 aa11.3□□□□□ -0.6
CCDC144B-208ENST00000618081 ANTXR2P58335 489 aa11.3□□□□□ -0.6
CCDC144B-208ENST00000618081 NAA30Q147X3 362 aaPredicted RBP11.3□□□□□ -0.6
CCDC144B-208ENST00000618081 ZNF549Q6P9A3 640 aa11.3□□□□□ -0.6
CCDC144B-208ENST00000618081 KIAA1324Q6UXG2 1013 aaKnown RBP11.3□□□□□ -0.6
CCDC144B-208ENST00000618081 SELENOMQ8WWX9 145 aa11.3□□□□□ -0.6
CCDC144B-208ENST00000618081 CD101Q93033 1021 aa11.3□□□□□ -0.6
CCDC144B-208ENST00000618081 KCNN2Q9H2S1 579 aa11.3□□□□□ -0.6
CCDC144B-208ENST00000618081 CNGB3Q9NQW8 809 aa11.3□□□□□ -0.6
CCDC144B-208ENST00000618081 VPS4AQ9UN37 437 aa11.3□□□□□ -0.6
CCDC144B-208ENST00000618081 ANGPT4Q9Y264 503 aa11.3□□□□□ -0.6
CCDC144B-208ENST00000618081 MYRFQ9Y2G1 1151 aa11.3□□□□□ -0.6
CCDC144B-208ENST00000618081 ZDHHC9Q9Y397 364 aa11.3□□□□□ -0.6
CCDC144B-208ENST00000618081 MYPNQ86TC9 1320 aa11.3□□□□□ -0.6
CCDC144B-208ENST00000618081 PHGDHO43175 533 aaKnown RBP11.3□□□□□ -0.6
CCDC144B-208ENST00000618081 FGF19O95750 216 aa11.3□□□□□ -0.6
CCDC144B-208ENST00000618081 HECTD3Q5T447 861 aa11.3□□□□□ -0.6
CCDC144B-208ENST00000618081 KLHL35Q6PF15 583 aa11.3□□□□□ -0.6
CCDC144B-208ENST00000618081 IZUMO2Q6UXV1 221 aa11.3□□□□□ -0.6
CCDC144B-208ENST00000618081 CDHR5Q9HBB8 845 aa11.3□□□□□ -0.6
CCDC144B-208ENST00000618081 NECTIN3Q9NQS3 549 aa11.3□□□□□ -0.6
CCDC144B-208ENST00000618081 ING3Q9NXR8 418 aa11.3□□□□□ -0.6
CCDC144B-208ENST00000618081 CROCCQ5TZA2 2017 aa11.3□□□□□ -0.6
CCDC144B-208ENST00000618081 LTN1O94822 1766 aa11.3□□□□□ -0.6
CCDC144B-208ENST00000618081 ACKR2O00590 384 aa11.3□□□□□ -0.6
CCDC144B-208ENST00000618081 EPS8Q12929 822 aa11.3□□□□□ -0.6
CCDC144B-208ENST00000618081 DDI2Q5TDH0 399 aa11.3□□□□□ -0.6
CCDC144B-208ENST00000618081 DSELQ8IZU8 1212 aa11.3□□□□□ -0.6
CCDC144B-208ENST00000618081 MIR1-1HGQ9H1L0 117 aa11.3□□□□□ -0.6
CCDC144B-208ENST00000618081 GAKO14976 1311 aa11.3□□□□□ -0.6
CCDC144B-208ENST00000618081 KIF1AQ12756 1690 aa11.3□□□□□ -0.6
CCDC144B-208ENST00000618081 PFKFB4Q16877 469 aa11.3□□□□□ -0.6
CCDC144B-208ENST00000618081 SERPINA13PQ6UXR4 307 aa11.3□□□□□ -0.6
CCDC144B-208ENST00000618081 STK32CQ86UX6 486 aa11.3□□□□□ -0.6
CCDC144B-208ENST00000618081 KIAA1683Q9H0B3 1180 aa11.3□□□□□ -0.6
CCDC144B-208ENST00000618081 PCDHB9Q9Y5E1 797 aa11.3□□□□□ -0.6
CCDC144B-208ENST00000618081 BAZ2AQ9UIF9 1905 aaKnown RBP11.3□□□□□ -0.6
CCDC144B-208ENST00000618081 IL1BP01584 269 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms