RNA–Protein interactions for RNA: ENST00000617556.4

CYFIP1-207, Transcript of cytoplasmic FMR1 interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene CYFIP1, Length 5,674 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYFIP1-207ENST00000617556 CEP19Q96LK0 163 aa12.42□□□□□ -0.42
CYFIP1-207ENST00000617556 SRRDQ9UH36 339 aa12.42□□□□□ -0.42
CYFIP1-207ENST00000617556 TNPO3Q9Y5L0 923 aaKnown RBP12.42□□□□□ -0.42
CYFIP1-207ENST00000617556 CCDC88AQ3V6T2 1871 aa12.42□□□□□ -0.42
CYFIP1-207ENST00000617556 PHGDHO43175 533 aaKnown RBP12.42□□□□□ -0.42
CYFIP1-207ENST00000617556 MSI1O43347 362 aaKnown RBP12.42□□□□□ -0.42
CYFIP1-207ENST00000617556 HLA-DPA1P20036 260 aa12.42□□□□□ -0.42
CYFIP1-207ENST00000617556 PRIM2P49643 509 aa12.42□□□□□ -0.42
CYFIP1-207ENST00000617556 LRRC36Q1X8D7 754 aa12.42□□□□□ -0.42
CYFIP1-207ENST00000617556 PATL1Q86TB9 770 aaKnown RBP12.42□□□□□ -0.42
CYFIP1-207ENST00000617556 RSPH1Q8WYR4 309 aa12.42□□□□□ -0.42
CYFIP1-207ENST00000617556 ZNF516Q92618 1163 aa12.42□□□□□ -0.42
CYFIP1-207ENST00000617556 CNDP1Q96KN2 507 aa12.42□□□□□ -0.42
CYFIP1-207ENST00000617556 C2CD4BA6NLJ0 364 aa12.42□□□□□ -0.42
CYFIP1-207ENST00000617556 SRRM3A6NNA2 597 aaPredicted RBP12.42□□□□□ -0.42
CYFIP1-207ENST00000617556 FGBP02675 491 aa12.42□□□□□ -0.42
CYFIP1-207ENST00000617556 NAA20P61599 178 aa12.42□□□□□ -0.42
CYFIP1-207ENST00000617556 TGM3Q08188 693 aa12.42□□□□□ -0.42
CYFIP1-207ENST00000617556 STXBP5Q5T5C0 1151 aa12.42□□□□□ -0.42
CYFIP1-207ENST00000617556 PLD5Q8N7P1 536 aa12.42□□□□□ -0.42
CYFIP1-207ENST00000617556 C12orf50Q8NA57 414 aaPredicted RBP12.42□□□□□ -0.42
CYFIP1-207ENST00000617556 FAM126AQ9BYI3 521 aaPredicted RBP12.42□□□□□ -0.42
CYFIP1-207ENST00000617556 GLOD4Q9HC38 313 aa12.42□□□□□ -0.42
CYFIP1-207ENST00000617556 VPS45Q9NRW7 570 aa12.42□□□□□ -0.42
CYFIP1-207ENST00000617556 KIAA1522Q9P206 1035 aaPredicted RBP12.42□□□□□ -0.42
CYFIP1-207ENST00000617556 C16orf96A6NNT2 1141 aa12.42□□□□□ -0.42
CYFIP1-207ENST00000617556 KATNA1O75449 491 aa12.42□□□□□ -0.42
CYFIP1-207ENST00000617556 FAM163BP0C2L3 166 aa12.42□□□□□ -0.42
CYFIP1-207ENST00000617556 PEX5P50542 639 aa12.42□□□□□ -0.42
CYFIP1-207ENST00000617556 FUT11Q495W5 492 aa12.42□□□□□ -0.42
CYFIP1-207ENST00000617556 GPSM1Q86YR5 675 aa12.42□□□□□ -0.42
CYFIP1-207ENST00000617556 RASAL3Q86YV0 1011 aa12.42□□□□□ -0.42
CYFIP1-207ENST00000617556 STAG3L4Q8TBR4 150 aa12.42□□□□□ -0.42
CYFIP1-207ENST00000617556 DNAJC9Q8WXX5 260 aa12.42□□□□□ -0.42
CYFIP1-207ENST00000617556 QKIQ96PU8 341 aaKnown RBP eCLIP12.42□□□□□ -0.421e-8■■■■□ 25.9
CYFIP1-207ENST00000617556 ZNF446Q9NWS9 450 aa12.42□□□□□ -0.42
CYFIP1-207ENST00000617556 TMEM161AQ9NX61 479 aa12.42□□□□□ -0.42
CYFIP1-207ENST00000617556 SYBUQ9NX95 663 aa12.42□□□□□ -0.42
CYFIP1-207ENST00000617556 RWDD3Q9Y3V2 267 aa12.42□□□□□ -0.42
CYFIP1-207ENST00000617556 ADGRA3Q8IWK6 1321 aa12.41□□□□□ -0.42
CYFIP1-207ENST00000617556 MLNP12872 115 aa12.41□□□□□ -0.42
CYFIP1-207ENST00000617556 RHOQP17081 205 aa12.41□□□□□ -0.42
CYFIP1-207ENST00000617556 TEX44Q53QW1 395 aa12.41□□□□□ -0.42
CYFIP1-207ENST00000617556 LRRC8BQ6P9F7 803 aa12.41□□□□□ -0.42
CYFIP1-207ENST00000617556 BCAS3Q9H6U6 928 aa12.41□□□□□ -0.42
CYFIP1-207ENST00000617556 ASB8Q9H765 288 aa12.41□□□□□ -0.42
CYFIP1-207ENST00000617556 ZBTB14O43829 449 aa12.41□□□□□ -0.42
CYFIP1-207ENST00000617556 BANF1O75531 89 aa12.41□□□□□ -0.42
CYFIP1-207ENST00000617556 CAPN15O75808 1086 aa12.41□□□□□ -0.42
CYFIP1-207ENST00000617556 SOX11P35716 441 aa12.41□□□□□ -0.42
CYFIP1-207ENST00000617556 VHLP40337 213 aa12.41□□□□□ -0.42
CYFIP1-207ENST00000617556 HSPA13P48723 471 aa12.41□□□□□ -0.42
CYFIP1-207ENST00000617556 NME5P56597 212 aa12.41□□□□□ -0.42
CYFIP1-207ENST00000617556 AGKQ53H12 422 aa12.41□□□□□ -0.42
CYFIP1-207ENST00000617556 VARS2Q5ST30 1063 aaKnown RBP12.41□□□□□ -0.42
CYFIP1-207ENST00000617556 CYB5D1Q6P9G0 228 aa12.41□□□□□ -0.42
CYFIP1-207ENST00000617556 SLC41A1Q8IVJ1 513 aa12.41□□□□□ -0.42
CYFIP1-207ENST00000617556 PRCCQ92733 491 aaPredicted RBP12.41□□□□□ -0.42
CYFIP1-207ENST00000617556 AHSPQ9NZD4 102 aa12.41□□□□□ -0.42
CYFIP1-207ENST00000617556 SALL4Q9UJQ4 1053 aa12.41□□□□□ -0.42
CYFIP1-207ENST00000617556 R3HDM2Q9Y2K5 976 aaKnown RBP12.41□□□□□ -0.42
CYFIP1-207ENST00000617556 ZNF839A8K0R7 811 aa12.41□□□□□ -0.42
CYFIP1-207ENST00000617556 ABL2P42684 1182 aa12.41□□□□□ -0.42
CYFIP1-207ENST00000617556 MILR1Q7Z6M3 343 aa12.41□□□□□ -0.42
CYFIP1-207ENST00000617556 REPS1Q96D71 796 aa12.41□□□□□ -0.42
CYFIP1-207ENST00000617556 BBS2Q9BXC9 721 aa12.41□□□□□ -0.42
CYFIP1-207ENST00000617556 NOD2Q9HC29 1040 aa12.41□□□□□ -0.42
CYFIP1-207ENST00000617556 FBXO6Q9NRD1 293 aaPredicted RBP12.41□□□□□ -0.42
CYFIP1-207ENST00000617556 TMPRSS4Q9NRS4 437 aa12.41□□□□□ -0.42
CYFIP1-207ENST00000617556 KCNK4Q9NYG8 393 aa12.41□□□□□ -0.42
CYFIP1-207ENST00000617556 GNG14A0A1W2PPG7 69 aa12.41□□□□□ -0.42
CYFIP1-207ENST00000617556 VGLL3A8MV65 326 aa12.41□□□□□ -0.42
CYFIP1-207ENST00000617556 FCHO1O14526 889 aa12.41□□□□□ -0.42
CYFIP1-207ENST00000617556 ZSCAN9O15535 394 aaPredicted RBP12.41□□□□□ -0.42
CYFIP1-207ENST00000617556 SLC2A4P14672 509 aa12.41□□□□□ -0.42
CYFIP1-207ENST00000617556 SULT2A1Q06520 285 aa12.41□□□□□ -0.42
CYFIP1-207ENST00000617556 FAM228AQ86W67 206 aa12.41□□□□□ -0.42
CYFIP1-207ENST00000617556 ECHDC2Q86YB7 292 aa12.41□□□□□ -0.42
CYFIP1-207ENST00000617556 SYTL1Q8IYJ3 562 aa12.41□□□□□ -0.42
CYFIP1-207ENST00000617556 TSC22D3Q99576 134 aa12.41□□□□□ -0.42
CYFIP1-207ENST00000617556 TEKT2Q9UIF3 430 aa12.41□□□□□ -0.42
CYFIP1-207ENST00000617556 E9PAM4 449 aa12.4□□□□□ -0.42
CYFIP1-207ENST00000617556 C1QTNF3-AMACRE9PGA6 284 aa12.4□□□□□ -0.42
CYFIP1-207ENST00000617556 WNT3AP56704 352 aa12.4□□□□□ -0.42
CYFIP1-207ENST00000617556 DAOAP59103 153 aa12.4□□□□□ -0.42
CYFIP1-207ENST00000617556 PGS1Q32NB8 556 aa12.4□□□□□ -0.42
CYFIP1-207ENST00000617556 PLPP4Q5VZY2 271 aa12.4□□□□□ -0.42
CYFIP1-207ENST00000617556 KYQ8NBH2 561 aa12.4□□□□□ -0.42
CYFIP1-207ENST00000617556 GRIN3AQ8TCU5 1115 aa12.4□□□□□ -0.42
CYFIP1-207ENST00000617556 NDRG1Q92597 394 aaKnown RBP12.4□□□□□ -0.42
CYFIP1-207ENST00000617556 MED8Q96G25 268 aa12.4□□□□□ -0.42
CYFIP1-207ENST00000617556 CATSPER2Q96P56 530 aa12.4□□□□□ -0.42
CYFIP1-207ENST00000617556 TM6SF2Q9BZW4 377 aa12.4□□□□□ -0.42
CYFIP1-207ENST00000617556 CNTN3Q9P232 1028 aa12.4□□□□□ -0.42
CYFIP1-207ENST00000617556 BLOC1S6Q9UL45 172 aa12.4□□□□□ -0.42
CYFIP1-207ENST00000617556 KPNA5O15131 536 aa12.4□□□□□ -0.42
CYFIP1-207ENST00000617556 MFSD11O43934 449 aa12.4□□□□□ -0.42
CYFIP1-207ENST00000617556 LPOP22079 712 aaPredicted RBP12.4□□□□□ -0.42
CYFIP1-207ENST00000617556 L1CAMP32004 1257 aa12.4□□□□□ -0.42
CYFIP1-207ENST00000617556 MAP3K10Q02779 954 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms