RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 CHURC1-FNTBB4DL54 471 aa15.9■□□□□ 0.14
PCDHGC3-204ENST00000617222 KCNK1O00180 336 aa15.9■□□□□ 0.14
PCDHGC3-204ENST00000617222 PGRMC1O00264 195 aaKnown RBP15.9■□□□□ 0.14
PCDHGC3-204ENST00000617222 ATG13O75143 517 aa15.9■□□□□ 0.14
PCDHGC3-204ENST00000617222 TMCC1O94876 653 aa15.9■□□□□ 0.14
PCDHGC3-204ENST00000617222 EPHX1P07099 455 aa15.9■□□□□ 0.14
PCDHGC3-204ENST00000617222 RBP3P10745 1247 aa15.9■□□□□ 0.14
PCDHGC3-204ENST00000617222 VAV1P15498 845 aa15.9■□□□□ 0.14
PCDHGC3-204ENST00000617222 AOC1P19801 751 aa15.9■□□□□ 0.14
PCDHGC3-204ENST00000617222 RPS9P46781 194 aaKnown RBP15.9■□□□□ 0.14
PCDHGC3-204ENST00000617222 CLCN5P51795 746 aa15.9■□□□□ 0.14
PCDHGC3-204ENST00000617222 SLC10A7Q0GE19 358 aa15.9■□□□□ 0.14
PCDHGC3-204ENST00000617222 ENPP2Q13822 863 aa15.9■□□□□ 0.14
PCDHGC3-204ENST00000617222 RFTN1Q14699 578 aaPredicted RBP15.9■□□□□ 0.14
PCDHGC3-204ENST00000617222 LBRQ14739 615 aaKnown RBP15.9■□□□□ 0.14
PCDHGC3-204ENST00000617222 PRKD1Q15139 912 aaPredicted RBP15.9■□□□□ 0.14
PCDHGC3-204ENST00000617222 HSF5Q4G112 596 aaPredicted RBP15.9■□□□□ 0.14
PCDHGC3-204ENST00000617222 EOGTQ5NDL2 527 aa15.9■□□□□ 0.14
PCDHGC3-204ENST00000617222 FAM182AQ5T1J6 154 aa15.9■□□□□ 0.14
PCDHGC3-204ENST00000617222 TMCO4Q5TGY1 634 aa15.9■□□□□ 0.14
PCDHGC3-204ENST00000617222 CREG2Q8IUH2 290 aa15.9■□□□□ 0.14
PCDHGC3-204ENST00000617222 FRS2Q8WU20 508 aa15.9■□□□□ 0.14
PCDHGC3-204ENST00000617222 CASKIN2Q8WXE0 1202 aa15.9■□□□□ 0.14
PCDHGC3-204ENST00000617222 QKIQ96PU8 341 aaKnown RBP eCLIP15.9■□□□□ 0.14
PCDHGC3-204ENST00000617222 NAP1L3Q99457 506 aaPredicted RBP15.9■□□□□ 0.14
PCDHGC3-204ENST00000617222 AP1M1Q9BXS5 423 aa15.9■□□□□ 0.14
PCDHGC3-204ENST00000617222 TNKS2Q9H2K2 1166 aa15.9■□□□□ 0.14
PCDHGC3-204ENST00000617222 CHRDQ9H2X0 955 aa15.9■□□□□ 0.14
PCDHGC3-204ENST00000617222 SEPT10Q9P0V9 454 aa15.9■□□□□ 0.14
PCDHGC3-204ENST00000617222 ESPNB1AK53 854 aa15.89■□□□□ 0.13
PCDHGC3-204ENST00000617222 BNIP3LO60238 219 aa15.89■□□□□ 0.13
PCDHGC3-204ENST00000617222 JCHAINP01591 159 aa15.89■□□□□ 0.13
PCDHGC3-204ENST00000617222 CCNB1P14635 433 aa15.89■□□□□ 0.13
PCDHGC3-204ENST00000617222 RBL1P28749 1068 aa15.89■□□□□ 0.13
PCDHGC3-204ENST00000617222 ZNF33AQ06730 810 aa15.89■□□□□ 0.13
PCDHGC3-204ENST00000617222 SNX1Q13596 522 aa15.89■□□□□ 0.13
PCDHGC3-204ENST00000617222 HNRNPDQ14103 355 aaKnown RBP15.89■□□□□ 0.13
PCDHGC3-204ENST00000617222 HNRNPA1L2Q32P51 320 aaKnown RBP15.89■□□□□ 0.13
PCDHGC3-204ENST00000617222 SLC45A4Q5BKX6 768 aa15.89■□□□□ 0.13
PCDHGC3-204ENST00000617222 MARC1Q5VT66 337 aa15.89■□□□□ 0.13
PCDHGC3-204ENST00000617222 C22orf39Q6P5X5 142 aa15.89■□□□□ 0.13
PCDHGC3-204ENST00000617222 Q6ZVU0 165 aa15.89■□□□□ 0.13
PCDHGC3-204ENST00000617222 BMP8AQ7Z5Y6 402 aa15.89■□□□□ 0.13
PCDHGC3-204ENST00000617222 METTL3Q86U44 580 aaKnown RBP15.89■□□□□ 0.13
PCDHGC3-204ENST00000617222 CDKL3Q8IVW4 592 aaPredicted RBP15.89■□□□□ 0.13
PCDHGC3-204ENST00000617222 SLC35B2Q8TB61 432 aa15.89■□□□□ 0.13
PCDHGC3-204ENST00000617222 MAML1Q92585 1016 aa15.89■□□□□ 0.13
PCDHGC3-204ENST00000617222 GABRG3Q99928 467 aa15.89■□□□□ 0.13
PCDHGC3-204ENST00000617222 CINPQ9BW66 212 aaPredicted RBP15.89■□□□□ 0.13
PCDHGC3-204ENST00000617222 FRMD8P1Q9BZ68 369 aaPredicted RBP15.89■□□□□ 0.13
PCDHGC3-204ENST00000617222 CEP44Q9C0F1 390 aa15.89■□□□□ 0.13
PCDHGC3-204ENST00000617222 RBM22Q9NW64 420 aaKnown RBP eCLIP15.89■□□□□ 0.13
PCDHGC3-204ENST00000617222 DLGAP2Q9P1A6 1054 aa15.89■□□□□ 0.13
PCDHGC3-204ENST00000617222 SEPT3Q9UH03 358 aa15.89■□□□□ 0.13
PCDHGC3-204ENST00000617222 DNPEPQ9ULA0 475 aa15.89■□□□□ 0.13
PCDHGC3-204ENST00000617222 MMP17Q9ULZ9 603 aa15.89■□□□□ 0.13
PCDHGC3-204ENST00000617222 EDDM13A0A1B0GTR0 161 aa15.88■□□□□ 0.13
PCDHGC3-204ENST00000617222 BCLAF3A2AJT9 711 aaKnown RBP15.88■□□□□ 0.13
PCDHGC3-204ENST00000617222 TARSL2A2RTX5 802 aaKnown RBP15.88■□□□□ 0.13
PCDHGC3-204ENST00000617222 FAM86C2PA6NEL3 165 aa15.88■□□□□ 0.13
PCDHGC3-204ENST00000617222 KRIT1O00522 736 aa15.88■□□□□ 0.13
PCDHGC3-204ENST00000617222 LIASO43766 372 aa15.88■□□□□ 0.13
PCDHGC3-204ENST00000617222 SYNCRIPO60506 623 aaKnown RBP15.88■□□□□ 0.13
PCDHGC3-204ENST00000617222 SIN3BO75182 1162 aa15.88■□□□□ 0.13
PCDHGC3-204ENST00000617222 ZNF821O75541 412 aaPredicted RBP15.88■□□□□ 0.13
PCDHGC3-204ENST00000617222 NEBLO76041 1014 aa15.88■□□□□ 0.13
PCDHGC3-204ENST00000617222 URI1O94763 535 aaPredicted RBP15.88■□□□□ 0.13
PCDHGC3-204ENST00000617222 HOXB2P14652 356 aa15.88■□□□□ 0.13
PCDHGC3-204ENST00000617222 PAFAH1B1P43034 410 aa15.88■□□□□ 0.13
PCDHGC3-204ENST00000617222 MAGEA9P43362 315 aa15.88■□□□□ 0.13
PCDHGC3-204ENST00000617222 MMP13P45452 471 aa15.88■□□□□ 0.13
PCDHGC3-204ENST00000617222 RENBPP51606 427 aa15.88■□□□□ 0.13
PCDHGC3-204ENST00000617222 RHOAP61586 193 aa15.88■□□□□ 0.13
PCDHGC3-204ENST00000617222 MTAPQ13126 283 aa15.88■□□□□ 0.13
PCDHGC3-204ENST00000617222 ZNF235Q14590 738 aa15.88■□□□□ 0.13
PCDHGC3-204ENST00000617222 CCNG2Q16589 344 aa15.88■□□□□ 0.13
PCDHGC3-204ENST00000617222 BBS5Q8N3I7 341 aa15.88■□□□□ 0.13
PCDHGC3-204ENST00000617222 SPEM1Q8N4L4 309 aa15.88■□□□□ 0.13
PCDHGC3-204ENST00000617222 FBXL6Q8N531 539 aa15.88■□□□□ 0.13
PCDHGC3-204ENST00000617222 TEX26Q8N6G2 289 aa15.88■□□□□ 0.13
PCDHGC3-204ENST00000617222 PCDH20Q8N6Y1 951 aaKnown RBP15.88■□□□□ 0.13
PCDHGC3-204ENST00000617222 PRELID2Q8N945 189 aa15.88■□□□□ 0.13
PCDHGC3-204ENST00000617222 HTR3CQ8WXA8 447 aa15.88■□□□□ 0.13
PCDHGC3-204ENST00000617222 PTPRN2Q92932 1015 aa15.88■□□□□ 0.13
PCDHGC3-204ENST00000617222 FATE1Q969F0 183 aa15.88■□□□□ 0.13
PCDHGC3-204ENST00000617222 ISG20Q96AZ6 181 aaKnown RBP15.88■□□□□ 0.13
PCDHGC3-204ENST00000617222 TM6SF2Q9BZW4 377 aa15.88■□□□□ 0.13
PCDHGC3-204ENST00000617222 NT5MQ9NPB1 228 aa15.88■□□□□ 0.13
PCDHGC3-204ENST00000617222 PRSS16Q9NQE7 514 aa15.88■□□□□ 0.13
PCDHGC3-204ENST00000617222 C2orf42Q9NWW7 574 aa15.88■□□□□ 0.13
PCDHGC3-204ENST00000617222 BDP1A6H8Y1 2624 aa15.88■□□□□ 0.13
PCDHGC3-204ENST00000617222 VCANP13611 3396 aa15.88■□□□□ 0.13
PCDHGC3-204ENST00000617222 ATG2BQ96BY7 2078 aa15.88■□□□□ 0.13
PCDHGC3-204ENST00000617222 A0A1W2PQF6 199 aa15.87■□□□□ 0.13
PCDHGC3-204ENST00000617222 PDE2AO00408 941 aaPredicted RBP15.87■□□□□ 0.13
PCDHGC3-204ENST00000617222 COL9A1P20849 921 aa15.87■□□□□ 0.13
PCDHGC3-204ENST00000617222 PTPN3P26045 913 aa15.87■□□□□ 0.13
PCDHGC3-204ENST00000617222 RECQLP46063 649 aaPredicted RBP15.87■□□□□ 0.13
PCDHGC3-204ENST00000617222 SNRPD1P62314 119 aaKnown RBP15.87■□□□□ 0.13
PCDHGC3-204ENST00000617222 IFI35P80217 286 aaPredicted RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms