RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 JADE1Q6IE81 842 aa13.37□□□□□ -0.27
MSH6-214ENST00000616033 RSBN1LQ6PCB5 846 aaPredicted RBP13.37□□□□□ -0.27
MSH6-214ENST00000616033 ZBTB8OSQ8IWT0 167 aa13.37□□□□□ -0.27
MSH6-214ENST00000616033 MTG1Q9BT17 334 aaPredicted RBP13.37□□□□□ -0.27
MSH6-214ENST00000616033 PDLIM7Q9NR12 457 aa13.37□□□□□ -0.27
MSH6-214ENST00000616033 CEP350Q5VT06 3117 aa13.37□□□□□ -0.27
MSH6-214ENST00000616033 LY75O60449 1722 aa13.37□□□□□ -0.27
MSH6-214ENST00000616033 MICAL3Q7RTP6 2002 aa13.36□□□□□ -0.27
MSH6-214ENST00000616033 LACTBL1A8MY62 500 aa13.36□□□□□ -0.27
MSH6-214ENST00000616033 ATG7O95352 703 aa13.36□□□□□ -0.27
MSH6-214ENST00000616033 ZNF23P17027 643 aa13.36□□□□□ -0.27
MSH6-214ENST00000616033 ZNF26P17031 533 aaPredicted RBP13.36□□□□□ -0.27
MSH6-214ENST00000616033 CYP3A5P20815 502 aa13.36□□□□□ -0.27
MSH6-214ENST00000616033 MAP4P27816 1152 aaKnown RBP13.36□□□□□ -0.27
MSH6-214ENST00000616033 CDK9P50750 372 aaKnown RBP13.36□□□□□ -0.27
MSH6-214ENST00000616033 HMGCS2P54868 508 aa13.36□□□□□ -0.27
MSH6-214ENST00000616033 CTBP1Q13363 440 aa13.36□□□□□ -0.27
MSH6-214ENST00000616033 ZFP1Q6P2D0 407 aa13.36□□□□□ -0.27
MSH6-214ENST00000616033 RP9Q8TA86 221 aaKnown RBP13.36□□□□□ -0.27
MSH6-214ENST00000616033 P2RY11Q96G91 374 aa13.36□□□□□ -0.27
MSH6-214ENST00000616033 HPDLQ96IR7 371 aa13.36□□□□□ -0.27
MSH6-214ENST00000616033 DHX33Q9H6R0 707 aaKnown RBP13.36□□□□□ -0.27
MSH6-214ENST00000616033 DGKBQ9Y6T7 804 aa13.36□□□□□ -0.27
MSH6-214ENST00000616033 ZBBXA8MT70 800 aa13.36□□□□□ -0.27
MSH6-214ENST00000616033 B4GAT1O43505 415 aa13.36□□□□□ -0.27
MSH6-214ENST00000616033 MFSD11O43934 449 aa13.36□□□□□ -0.27
MSH6-214ENST00000616033 NCAM1P13591 858 aa13.36□□□□□ -0.27
MSH6-214ENST00000616033 ARL1P40616 181 aaPredicted RBP13.36□□□□□ -0.27
MSH6-214ENST00000616033 ARL4AP40617 200 aa13.36□□□□□ -0.27
MSH6-214ENST00000616033 HARS2P49590 506 aaKnown RBP13.36□□□□□ -0.27
MSH6-214ENST00000616033 APOFQ13790 326 aa13.36□□□□□ -0.27
MSH6-214ENST00000616033 ATF7IP2Q5U623 682 aa13.36□□□□□ -0.27
MSH6-214ENST00000616033 SLC41A1Q8IVJ1 513 aa13.36□□□□□ -0.27
MSH6-214ENST00000616033 TMEM102Q8N9M5 508 aaPredicted RBP13.36□□□□□ -0.27
MSH6-214ENST00000616033 OR6B3Q8NGW1 331 aa13.36□□□□□ -0.27
MSH6-214ENST00000616033 TMEM174Q8WUU8 243 aa13.36□□□□□ -0.27
MSH6-214ENST00000616033 FAM96AQ9H5X1 160 aa13.36□□□□□ -0.27
MSH6-214ENST00000616033 CXorf21Q9HAI6 301 aa13.36□□□□□ -0.27
MSH6-214ENST00000616033 PCDH12Q9NPG4 1184 aa13.36□□□□□ -0.27
MSH6-214ENST00000616033 CHST12Q9NRB3 414 aa13.36□□□□□ -0.27
MSH6-214ENST00000616033 OLAHQ9NV23 265 aa13.36□□□□□ -0.27
MSH6-214ENST00000616033 WDR70Q9NW82 654 aa13.36□□□□□ -0.27
MSH6-214ENST00000616033 GIMAP2Q9UG22 337 aa13.36□□□□□ -0.27
MSH6-214ENST00000616033 SIX4Q9UIU6 781 aa13.36□□□□□ -0.27
MSH6-214ENST00000616033 RABL2BQ9UNT1 228 aa13.36□□□□□ -0.27
MSH6-214ENST00000616033 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.36□□□□□ -0.27
MSH6-214ENST00000616033 BCLAF3A2AJT9 711 aaKnown RBP13.36□□□□□ -0.27
MSH6-214ENST00000616033 G3V2L1 256 aa13.36□□□□□ -0.27
MSH6-214ENST00000616033 AP1G1O43747 822 aa13.36□□□□□ -0.27
MSH6-214ENST00000616033 CCDC130P13994 396 aa13.36□□□□□ -0.27
MSH6-214ENST00000616033 STAT5BP51692 787 aa13.36□□□□□ -0.27
MSH6-214ENST00000616033 CTBSQ01459 385 aa13.36□□□□□ -0.27
MSH6-214ENST00000616033 GRM3Q14832 879 aa13.36□□□□□ -0.27
MSH6-214ENST00000616033 OTUD3Q5T2D3 398 aaPredicted RBP13.36□□□□□ -0.27
MSH6-214ENST00000616033 RNF19BQ6ZMZ0 732 aa13.36□□□□□ -0.27
MSH6-214ENST00000616033 PRR23BQ6ZRT6 265 aa13.36□□□□□ -0.27
MSH6-214ENST00000616033 SETD3Q86TU7 594 aaPredicted RBP13.36□□□□□ -0.27
MSH6-214ENST00000616033 PGAM4Q8N0Y7 254 aa13.36□□□□□ -0.27
MSH6-214ENST00000616033 FIBCD1Q8N539 461 aa13.36□□□□□ -0.27
MSH6-214ENST00000616033 FNIP1Q8TF40 1166 aa13.36□□□□□ -0.27
MSH6-214ENST00000616033 ARNTL2Q8WYA1 636 aa13.36□□□□□ -0.27
MSH6-214ENST00000616033 LRRC39Q96DD0 335 aa13.36□□□□□ -0.27
MSH6-214ENST00000616033 MCRS1Q96EZ8 462 aa13.36□□□□□ -0.27
MSH6-214ENST00000616033 TSPAN18Q96SJ8 248 aa13.36□□□□□ -0.27
MSH6-214ENST00000616033 CLK4Q9HAZ1 481 aaKnown RBP13.36□□□□□ -0.27
MSH6-214ENST00000616033 FAIMQ9NVQ4 179 aa13.36□□□□□ -0.27
MSH6-214ENST00000616033 WARS2Q9UGM6 360 aaKnown RBP13.36□□□□□ -0.27
MSH6-214ENST00000616033 PRPF19Q9UMS4 504 aaKnown RBP13.36□□□□□ -0.27
MSH6-214ENST00000616033 MYL4P12829 197 aa13.35□□□□□ -0.27
MSH6-214ENST00000616033 SLC7A2P52569 658 aa13.35□□□□□ -0.27
MSH6-214ENST00000616033 LAMTOR4Q0VGL1 99 aa13.35□□□□□ -0.27
MSH6-214ENST00000616033 HABP4Q5JVS0 413 aaKnown RBP13.35□□□□□ -0.27
MSH6-214ENST00000616033 TREML2Q5T2D2 321 aa13.35□□□□□ -0.27
MSH6-214ENST00000616033 EGFLAMQ63HQ2 1017 aa13.35□□□□□ -0.27
MSH6-214ENST00000616033 ELMSAN1Q6PJG2 1045 aa13.35□□□□□ -0.27
MSH6-214ENST00000616033 PDZD8Q8NEN9 1154 aa13.35□□□□□ -0.27
MSH6-214ENST00000616033 CEP44Q9C0F1 390 aa13.35□□□□□ -0.27
MSH6-214ENST00000616033 ATXN3LQ9H3M9 355 aa13.35□□□□□ -0.27
MSH6-214ENST00000616033 PRDM12Q9H4Q4 367 aa13.35□□□□□ -0.27
MSH6-214ENST00000616033 XPR1Q9UBH6 696 aa13.35□□□□□ -0.27
MSH6-214ENST00000616033 SH3PXD2BA1X283 911 aa13.35□□□□□ -0.27
MSH6-214ENST00000616033 PRORSD1PA6NEY8 169 aa13.35□□□□□ -0.27
MSH6-214ENST00000616033 TOR1BO14657 336 aa13.35□□□□□ -0.27
MSH6-214ENST00000616033 MAFGO15525 162 aa13.35□□□□□ -0.27
MSH6-214ENST00000616033 HTRA2O43464 458 aaPredicted RBP13.35□□□□□ -0.27
MSH6-214ENST00000616033 MAN1A2O60476 641 aa13.35□□□□□ -0.27
MSH6-214ENST00000616033 PGAM1P18669 254 aa13.35□□□□□ -0.27
MSH6-214ENST00000616033 ACAT1P24752 427 aaKnown RBP13.35□□□□□ -0.27
MSH6-214ENST00000616033 NUP107P57740 925 aa13.35□□□□□ -0.27
MSH6-214ENST00000616033 PITX1P78337 314 aaPredicted RBP13.35□□□□□ -0.27
MSH6-214ENST00000616033 PLIN5Q00G26 463 aa13.35□□□□□ -0.27
MSH6-214ENST00000616033 CAPRIN1Q14444 709 aaKnown RBP13.35□□□□□ -0.27
MSH6-214ENST00000616033 TAZQ16635 292 aa13.35□□□□□ -0.27
MSH6-214ENST00000616033 KIF19Q2TAC6 998 aa13.35□□□□□ -0.27
MSH6-214ENST00000616033 METTL21CQ5VZV1 264 aa13.35□□□□□ -0.27
MSH6-214ENST00000616033 NT5DC4Q86YG4 428 aa13.35□□□□□ -0.27
MSH6-214ENST00000616033 SPPL2CQ8IUH8 684 aa13.35□□□□□ -0.27
MSH6-214ENST00000616033 BBS5Q8N3I7 341 aa13.35□□□□□ -0.27
MSH6-214ENST00000616033 RYBPQ8N488 228 aaPredicted RBP13.35□□□□□ -0.27
MSH6-214ENST00000616033 BPIFB6Q8NFQ5 453 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms