RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 KLHDC10Q6PID8 442 aa8.96□□□□□ -0.97
VPS11-206ENST00000614944 VSTM1Q6UX27 236 aa8.96□□□□□ -0.97
VPS11-206ENST00000614944 ZNF280BQ86YH2 543 aa8.96□□□□□ -0.97
VPS11-206ENST00000614944 ZNF276Q8N554 614 aa8.96□□□□□ -0.97
VPS11-206ENST00000614944 TMA16Q96EY4 203 aaKnown RBP8.96□□□□□ -0.97
VPS11-206ENST00000614944 RUNDC3BQ96NL0 473 aa8.96□□□□□ -0.97
VPS11-206ENST00000614944 C11orf70Q9BRQ4 267 aa8.96□□□□□ -0.97
VPS11-206ENST00000614944 DPEP3Q9H4B8 488 aa8.96□□□□□ -0.97
VPS11-206ENST00000614944 TXLNGQ9NUQ3 528 aa8.96□□□□□ -0.97
VPS11-206ENST00000614944 UCKL1Q9NWZ5 548 aa8.96□□□□□ -0.97
VPS11-206ENST00000614944 EHD2Q9NZN4 543 aa8.96□□□□□ -0.97
VPS11-206ENST00000614944 UTP11Q9Y3A2 253 aaKnown RBP8.96□□□□□ -0.97
VPS11-206ENST00000614944 HHLA1C9JL84 531 aa8.96□□□□□ -0.97
VPS11-206ENST00000614944 AQP9O43315 295 aa8.96□□□□□ -0.97
VPS11-206ENST00000614944 ZNF143P52747 638 aaPredicted RBP8.96□□□□□ -0.97
VPS11-206ENST00000614944 ATN1P54259 1190 aaPredicted RBP8.96□□□□□ -0.97
VPS11-206ENST00000614944 AIF1P55008 147 aa8.96□□□□□ -0.97
VPS11-206ENST00000614944 WDR5P61964 334 aaKnown RBP8.96□□□□□ -0.97
VPS11-206ENST00000614944 RNASELQ05823 741 aaKnown RBP8.96□□□□□ -0.97
VPS11-206ENST00000614944 EFHC1Q5JVL4 640 aa8.96□□□□□ -0.97
VPS11-206ENST00000614944 CYP4A22Q5TCH4 519 aa8.96□□□□□ -0.97
VPS11-206ENST00000614944 PM20D1Q6GTS8 502 aa8.96□□□□□ -0.97
VPS11-206ENST00000614944 OVOS1Q6IE37 1185 aa8.96□□□□□ -0.97
VPS11-206ENST00000614944 FAM35AQ86V20 835 aa8.96□□□□□ -0.97
VPS11-206ENST00000614944 LRRC34Q8IZ02 419 aa8.96□□□□□ -0.97
VPS11-206ENST00000614944 ATP6V0D2Q8N8Y2 350 aa8.96□□□□□ -0.97
VPS11-206ENST00000614944 EIF1ADQ8N9N8 165 aaKnown RBP8.96□□□□□ -0.97
VPS11-206ENST00000614944 TTC8Q8TAM2 541 aa8.96□□□□□ -0.97
VPS11-206ENST00000614944 NT5C3BQ969T7 300 aa8.96□□□□□ -0.97
VPS11-206ENST00000614944 PGAP3Q96FM1 320 aaPredicted RBP8.96□□□□□ -0.97
VPS11-206ENST00000614944 SCLYQ96I15 445 aa8.96□□□□□ -0.97
VPS11-206ENST00000614944 SP140LQ9H930 580 aa8.96□□□□□ -0.97
VPS11-206ENST00000614944 USP15Q9Y4E8 981 aaPredicted RBP8.96□□□□□ -0.97
VPS11-206ENST00000614944 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.96□□□□□ -0.97
VPS11-206ENST00000614944 GREB1Q4ZG55 1949 aa8.96□□□□□ -0.98
VPS11-206ENST00000614944 FADS2P1A8MWK0 482 aa8.96□□□□□ -0.98
VPS11-206ENST00000614944 BHMG1C9JSJ3 638 aaPredicted RBP8.96□□□□□ -0.98
VPS11-206ENST00000614944 CCDC188H7C350 402 aa8.96□□□□□ -0.98
VPS11-206ENST00000614944 PDE2AO00408 941 aaPredicted RBP8.96□□□□□ -0.98
VPS11-206ENST00000614944 ALOX15BO15296 676 aa8.96□□□□□ -0.98
VPS11-206ENST00000614944 SULT1B1O43704 296 aa8.96□□□□□ -0.98
VPS11-206ENST00000614944 B4GALT3O60512 393 aa8.96□□□□□ -0.98
VPS11-206ENST00000614944 TRMUO75648 421 aaKnown RBP8.96□□□□□ -0.98
VPS11-206ENST00000614944 FUCA1P04066 466 aa8.96□□□□□ -0.98
VPS11-206ENST00000614944 HOXB1P14653 301 aaPredicted RBP8.96□□□□□ -0.98
VPS11-206ENST00000614944 SLC11A1P49279 550 aa8.96□□□□□ -0.98
VPS11-206ENST00000614944 P2RX3P56373 397 aa8.96□□□□□ -0.98
VPS11-206ENST00000614944 YWHAHQ04917 246 aaPredicted RBP8.96□□□□□ -0.98
VPS11-206ENST00000614944 CUL1Q13616 776 aa8.96□□□□□ -0.98
VPS11-206ENST00000614944 DCDC5Q6ZRR9 648 aa8.96□□□□□ -0.98
VPS11-206ENST00000614944 ANKS3Q6ZW76 656 aa8.96□□□□□ -0.98
VPS11-206ENST00000614944 CYP2U1Q7Z449 544 aa8.96□□□□□ -0.98
VPS11-206ENST00000614944 RHOT1Q8IXI2 618 aa8.96□□□□□ -0.98
VPS11-206ENST00000614944 ELMOD2Q8IZ81 293 aa8.96□□□□□ -0.98
VPS11-206ENST00000614944 TMEM130Q8N3G9 435 aa8.96□□□□□ -0.98
VPS11-206ENST00000614944 TTLQ8NG68 377 aa8.96□□□□□ -0.98
VPS11-206ENST00000614944 NRBF2Q96F24 287 aa8.96□□□□□ -0.98
VPS11-206ENST00000614944 SLC2A13Q96QE2 648 aa8.96□□□□□ -0.98
VPS11-206ENST00000614944 PHF12Q96QT6 1004 aa8.96□□□□□ -0.98
VPS11-206ENST00000614944 FRMD8P1Q9BZ68 369 aaPredicted RBP8.96□□□□□ -0.98
VPS11-206ENST00000614944 IFT22Q9H7X7 185 aa8.96□□□□□ -0.98
VPS11-206ENST00000614944 RXFP1Q9HBX9 757 aa8.96□□□□□ -0.98
VPS11-206ENST00000614944 CHST7Q9NS84 486 aa8.96□□□□□ -0.98
VPS11-206ENST00000614944 ANAPC7Q9UJX3 599 aa8.96□□□□□ -0.98
VPS11-206ENST00000614944 SOX13Q9UN79 622 aa8.96□□□□□ -0.98
VPS11-206ENST00000614944 NOVA2Q9UNW9 492 aaKnown RBP8.96□□□□□ -0.98
VPS11-206ENST00000614944 TMEM5Q9Y2B1 443 aa8.96□□□□□ -0.98
VPS11-206ENST00000614944 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.96□□□□□ -0.98
VPS11-206ENST00000614944 USP3Q9Y6I4 520 aa8.96□□□□□ -0.98
VPS11-206ENST00000614944 C2CD4BA6NLJ0 364 aa8.95□□□□□ -0.98
VPS11-206ENST00000614944 SOBPA7XYQ1 873 aa8.95□□□□□ -0.98
VPS11-206ENST00000614944 DAB1O75553 588 aa8.95□□□□□ -0.98
VPS11-206ENST00000614944 ATP5HO75947 161 aa8.95□□□□□ -0.98
VPS11-206ENST00000614944 UNC5CO95185 931 aa8.95□□□□□ -0.98
VPS11-206ENST00000614944 KRT3P12035 628 aa8.95□□□□□ -0.98
VPS11-206ENST00000614944 ATF6P18850 670 aa8.95□□□□□ -0.98
VPS11-206ENST00000614944 COMTP21964 271 aa8.95□□□□□ -0.98
VPS11-206ENST00000614944 PPM1AP35813 382 aa8.95□□□□□ -0.98
VPS11-206ENST00000614944 CCL23P55773 120 aa8.95□□□□□ -0.98
VPS11-206ENST00000614944 OLR1P78380 273 aa8.95□□□□□ -0.98
VPS11-206ENST00000614944 TAGLNQ01995 201 aaKnown RBP8.95□□□□□ -0.98
VPS11-206ENST00000614944 SLC34A1Q06495 639 aa8.95□□□□□ -0.98
VPS11-206ENST00000614944 SPDYAQ5MJ70 313 aa8.95□□□□□ -0.98
VPS11-206ENST00000614944 SHEQ5VZ18 495 aa8.95□□□□□ -0.98
VPS11-206ENST00000614944 CLEC20AQ6ZU45 233 aa8.95□□□□□ -0.98
VPS11-206ENST00000614944 RTL10Q7L3V2 364 aa8.95□□□□□ -0.98
VPS11-206ENST00000614944 DACT3Q96B18 629 aaPredicted RBP8.95□□□□□ -0.98
VPS11-206ENST00000614944 SLC9A7Q96T83 725 aa8.95□□□□□ -0.98
VPS11-206ENST00000614944 PAAF1Q9BRP4 392 aa8.95□□□□□ -0.98
VPS11-206ENST00000614944 CNPY3Q9BT09 278 aa8.95□□□□□ -0.98
VPS11-206ENST00000614944 ADNPQ9H2P0 1102 aa8.95□□□□□ -0.98
VPS11-206ENST00000614944 TBC1D14Q9P2M4 693 aa8.95□□□□□ -0.98
VPS11-206ENST00000614944 FAM92AA1XBS5 289 aa8.95□□□□□ -0.98
VPS11-206ENST00000614944 PRSS47A8MTI9 375 aa8.95□□□□□ -0.98
VPS11-206ENST00000614944 ENTPD5O75356 428 aa8.95□□□□□ -0.98
VPS11-206ENST00000614944 RAG1P15918 1043 aa8.95□□□□□ -0.98
VPS11-206ENST00000614944 CRABP2P29373 138 aa8.95□□□□□ -0.98
VPS11-206ENST00000614944 ZNF252P-AS1Q0IIN9 211 aa8.95□□□□□ -0.98
VPS11-206ENST00000614944 CYP1B1Q16678 543 aa8.95□□□□□ -0.98
VPS11-206ENST00000614944 PMF1Q6P1K2 205 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms