RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 HTR3CQ8WXA8 447 aa11.68□□□□□ -0.54
SLIRP-212ENST00000613856 TMA16Q96EY4 203 aaKnown RBP11.68□□□□□ -0.54
SLIRP-212ENST00000613856 CELF6Q96J87 481 aaKnown RBP11.68□□□□□ -0.54
SLIRP-212ENST00000613856 PNKPQ96T60 521 aa11.68□□□□□ -0.54
SLIRP-212ENST00000613856 LGMNQ99538 433 aa11.68□□□□□ -0.54
SLIRP-212ENST00000613856 MAGEH1Q9H213 219 aa11.68□□□□□ -0.54
SLIRP-212ENST00000613856 CHRDQ9H2X0 955 aa11.68□□□□□ -0.54
SLIRP-212ENST00000613856 FAM114A2Q9NRY5 505 aa11.68□□□□□ -0.54
SLIRP-212ENST00000613856 MARK1Q9P0L2 795 aa11.68□□□□□ -0.54
SLIRP-212ENST00000613856 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.67□□□□□ -0.54
SLIRP-212ENST00000613856 A0A0A0MRY4 1105 aa11.67□□□□□ -0.54
SLIRP-212ENST00000613856 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.67□□□□□ -0.54
SLIRP-212ENST00000613856 C5orf60A6NFR6 353 aa11.67□□□□□ -0.54
SLIRP-212ENST00000613856 ZSCAN5CA6NGD5 496 aaPredicted RBP11.67□□□□□ -0.54
SLIRP-212ENST00000613856 DFFAO00273 331 aa11.67□□□□□ -0.54
SLIRP-212ENST00000613856 TRDMT1O14717 391 aaKnown RBP11.67□□□□□ -0.54
SLIRP-212ENST00000613856 NDC80O14777 642 aa11.67□□□□□ -0.54
SLIRP-212ENST00000613856 SCAMP3O14828 347 aaKnown RBP11.67□□□□□ -0.54
SLIRP-212ENST00000613856 KCNN4O15554 427 aa11.67□□□□□ -0.54
SLIRP-212ENST00000613856 TSPAN3O60637 253 aa11.67□□□□□ -0.54
SLIRP-212ENST00000613856 MAFKO60675 156 aa11.67□□□□□ -0.54
SLIRP-212ENST00000613856 GCATO75600 419 aa11.67□□□□□ -0.54
SLIRP-212ENST00000613856 STK10O94804 968 aaKnown RBP11.67□□□□□ -0.54
SLIRP-212ENST00000613856 CYBBP04839 570 aa11.67□□□□□ -0.54
SLIRP-212ENST00000613856 RHOCP08134 193 aa11.67□□□□□ -0.54
SLIRP-212ENST00000613856 CCNCP24863 283 aa11.67□□□□□ -0.54
SLIRP-212ENST00000613856 HOXD9P28356 352 aaPredicted RBP11.67□□□□□ -0.54
SLIRP-212ENST00000613856 OXCT1P55809 520 aa11.67□□□□□ -0.54
SLIRP-212ENST00000613856 IFI35P80217 286 aaPredicted RBP11.67□□□□□ -0.54
SLIRP-212ENST00000613856 PFKPQ01813 784 aa11.67□□□□□ -0.54
SLIRP-212ENST00000613856 GNA12Q03113 381 aa11.67□□□□□ -0.54
SLIRP-212ENST00000613856 AP1B1Q10567 949 aa11.67□□□□□ -0.54
SLIRP-212ENST00000613856 ZNF177Q13360 481 aaPredicted RBP11.67□□□□□ -0.54
SLIRP-212ENST00000613856 POLD3Q15054 466 aaPredicted RBP11.67□□□□□ -0.54
SLIRP-212ENST00000613856 SF3A2Q15428 464 aaKnown RBP11.67□□□□□ -0.54
SLIRP-212ENST00000613856 FYB2Q5VWT5 728 aa11.67□□□□□ -0.54
SLIRP-212ENST00000613856 LAIR1Q6GTX8 287 aa11.67□□□□□ -0.54
SLIRP-212ENST00000613856 CXorf57Q6NSI4 855 aaKnown RBP11.67□□□□□ -0.54
SLIRP-212ENST00000613856 ZNF852Q6ZMS4 543 aa11.67□□□□□ -0.54
SLIRP-212ENST00000613856 CCDC13Q8IYE1 715 aa11.67□□□□□ -0.54
SLIRP-212ENST00000613856 ZNF557Q8N988 423 aaPredicted RBP11.67□□□□□ -0.54
SLIRP-212ENST00000613856 FAM71DQ8N9W8 422 aa11.67□□□□□ -0.54
SLIRP-212ENST00000613856 GLIS1Q8NBF1 620 aa11.67□□□□□ -0.54
SLIRP-212ENST00000613856 CCNYQ8ND76 341 aa11.67□□□□□ -0.54
SLIRP-212ENST00000613856 BPIFB1Q8TDL5 484 aa11.67□□□□□ -0.54
SLIRP-212ENST00000613856 OSCP1Q8WVF1 389 aa11.67□□□□□ -0.54
SLIRP-212ENST00000613856 CASKIN2Q8WXE0 1202 aa11.67□□□□□ -0.54
SLIRP-212ENST00000613856 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.67□□□□□ -0.54
SLIRP-212ENST00000613856 ARHGEF2Q92974 986 aaKnown RBP11.67□□□□□ -0.54
SLIRP-212ENST00000613856 RSPRY1Q96DX4 576 aa11.67□□□□□ -0.54
SLIRP-212ENST00000613856 HMCESQ96FZ2 354 aa11.67□□□□□ -0.54
SLIRP-212ENST00000613856 P2RY11Q96G91 374 aa11.67□□□□□ -0.54
SLIRP-212ENST00000613856 SPATA13Q96N96 652 aa11.67□□□□□ -0.54
SLIRP-212ENST00000613856 VAT1Q99536 393 aa11.67□□□□□ -0.54
SLIRP-212ENST00000613856 PARD6BQ9BYG5 372 aa11.67□□□□□ -0.54
SLIRP-212ENST00000613856 C10orf88Q9H8K7 445 aa11.67□□□□□ -0.54
SLIRP-212ENST00000613856 EPB41L5Q9HCM4 733 aa11.67□□□□□ -0.54
SLIRP-212ENST00000613856 WHRNQ9P202 907 aa11.67□□□□□ -0.54
SLIRP-212ENST00000613856 PAK5Q9P286 719 aa11.67□□□□□ -0.54
SLIRP-212ENST00000613856 ASIC3Q9UHC3 531 aa11.67□□□□□ -0.54
SLIRP-212ENST00000613856 HEPACAM2A8MVW5 462 aa11.66□□□□□ -0.54
SLIRP-212ENST00000613856 RNF103O00237 685 aa11.66□□□□□ -0.54
SLIRP-212ENST00000613856 OPHN1O60890 802 aa11.66□□□□□ -0.54
SLIRP-212ENST00000613856 IFNB1P01574 187 aa11.66□□□□□ -0.54
SLIRP-212ENST00000613856 IVDP26440 423 aa11.66□□□□□ -0.54
SLIRP-212ENST00000613856 RPL22P35268 128 aaKnown RBP11.66□□□□□ -0.54
SLIRP-212ENST00000613856 ACTN2P35609 894 aa11.66□□□□□ -0.54
SLIRP-212ENST00000613856 MAGEA9P43362 315 aa11.66□□□□□ -0.54
SLIRP-212ENST00000613856 RPL21P46778 160 aaKnown RBP11.66□□□□□ -0.54
SLIRP-212ENST00000613856 PAPOLAP51003 745 aaKnown RBP11.66□□□□□ -0.54
SLIRP-212ENST00000613856 CLCN6P51797 869 aa11.66□□□□□ -0.54
SLIRP-212ENST00000613856 VSNL1P62760 191 aa11.66□□□□□ -0.54
SLIRP-212ENST00000613856 IL10RBQ08334 325 aa11.66□□□□□ -0.54
SLIRP-212ENST00000613856 WASHC5Q12768 1159 aa11.66□□□□□ -0.54
SLIRP-212ENST00000613856 SERINC3Q13530 473 aa11.66□□□□□ -0.54
SLIRP-212ENST00000613856 ANO4Q32M45 955 aa11.66□□□□□ -0.54
SLIRP-212ENST00000613856 Q6ZS52 159 aa11.66□□□□□ -0.54
SLIRP-212ENST00000613856 CCDC33Q8N5R6 958 aa11.66□□□□□ -0.54
SLIRP-212ENST00000613856 NETO2Q8NC67 525 aa11.66□□□□□ -0.54
SLIRP-212ENST00000613856 BBOF1Q8ND07 529 aa11.66□□□□□ -0.54
SLIRP-212ENST00000613856 DDI1Q8WTU0 396 aa11.66□□□□□ -0.54
SLIRP-212ENST00000613856 MAML1Q92585 1016 aa11.66□□□□□ -0.54
SLIRP-212ENST00000613856 IRF7Q92985 503 aa11.66□□□□□ -0.54
SLIRP-212ENST00000613856 LRRC45Q96CN5 670 aa11.66□□□□□ -0.54
SLIRP-212ENST00000613856 SNF8Q96H20 258 aa11.66□□□□□ -0.54
SLIRP-212ENST00000613856 LRRC3BQ96PB8 259 aa11.66□□□□□ -0.54
SLIRP-212ENST00000613856 SMOC1Q9H4F8 434 aa11.66□□□□□ -0.54
SLIRP-212ENST00000613856 LMAN1LQ9HAT1 526 aa11.66□□□□□ -0.54
SLIRP-212ENST00000613856 ZFP14Q9HCL3 533 aa11.66□□□□□ -0.54
SLIRP-212ENST00000613856 SPHK2Q9NRA0 654 aa11.66□□□□□ -0.54
SLIRP-212ENST00000613856 GRHL1Q9NZI5 618 aa11.66□□□□□ -0.54
SLIRP-212ENST00000613856 IPO11Q9UI26 975 aaKnown RBP11.66□□□□□ -0.54
SLIRP-212ENST00000613856 WNT6Q9Y6F9 365 aa11.66□□□□□ -0.54
SLIRP-212ENST00000613856 ATG2BQ96BY7 2078 aa11.66□□□□□ -0.54
SLIRP-212ENST00000613856 SPAG17Q6Q759 2223 aa11.66□□□□□ -0.54
SLIRP-212ENST00000613856 ATRXP46100 2492 aa11.65□□□□□ -0.54
SLIRP-212ENST00000613856 FAM208BQ5VWN6 2430 aa11.65□□□□□ -0.54
SLIRP-212ENST00000613856 CXorf51AA0A1B0GTR3 108 aa11.65□□□□□ -0.54
SLIRP-212ENST00000613856 ESYT3A0FGR9 886 aa11.65□□□□□ -0.54
SLIRP-212ENST00000613856 H0Y626 953 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms