RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 S100PBPQ96BU1 408 aa8.87□□□□□ -0.99
TTC28-208ENST00000612946 KLF6Q99612 283 aaPredicted RBP8.87□□□□□ -0.99
TTC28-208ENST00000612946 ADI1Q9BV57 179 aa8.87□□□□□ -0.99
TTC28-208ENST00000612946 SLC4A5Q9BY07 1137 aa8.87□□□□□ -0.99
TTC28-208ENST00000612946 PNMA3Q9UL41 463 aa8.87□□□□□ -0.99
TTC28-208ENST00000612946 G3V2T6 193 aa8.87□□□□□ -0.99
TTC28-208ENST00000612946 OR7A10O76100 309 aa8.87□□□□□ -0.99
TTC28-208ENST00000612946 C8BP07358 591 aa8.87□□□□□ -0.99
TTC28-208ENST00000612946 GRK4P32298 578 aa8.87□□□□□ -0.99
TTC28-208ENST00000612946 MAPK12P53778 367 aa8.87□□□□□ -0.99
TTC28-208ENST00000612946 PRKG1Q13976 671 aa8.87□□□□□ -0.99
TTC28-208ENST00000612946 MYO1HQ8N1T3 1032 aa8.87□□□□□ -0.99
TTC28-208ENST00000612946 POU5F2Q8N7G0 328 aa8.87□□□□□ -0.99
TTC28-208ENST00000612946 NODALQ96S42 347 aa8.87□□□□□ -0.99
TTC28-208ENST00000612946 EXD2Q9NVH0 621 aa8.87□□□□□ -0.99
TTC28-208ENST00000612946 INTS10Q9NVR2 710 aaKnown RBP8.87□□□□□ -0.99
TTC28-208ENST00000612946 ZNF609O15014 1411 aa8.87□□□□□ -0.99
TTC28-208ENST00000612946 PSMD11O00231 422 aa8.87□□□□□ -0.99
TTC28-208ENST00000612946 CD151P48509 253 aa8.87□□□□□ -0.99
TTC28-208ENST00000612946 C1orf189Q5VU69 101 aa8.87□□□□□ -0.99
TTC28-208ENST00000612946 FBXO31Q5XUX0 539 aaPredicted RBP8.87□□□□□ -0.99
TTC28-208ENST00000612946 ETNPPLQ8TBG4 499 aa8.87□□□□□ -0.99
TTC28-208ENST00000612946 CCDC115Q96NT0 180 aa8.87□□□□□ -0.99
TTC28-208ENST00000612946 SLA2Q9H6Q3 261 aa8.87□□□□□ -0.99
TTC28-208ENST00000612946 LRRC4BQ9NT99 713 aa8.87□□□□□ -0.99
TTC28-208ENST00000612946 PHF24Q9UPV7 400 aa8.87□□□□□ -0.99
TTC28-208ENST00000612946 CCRL2O00421 344 aa8.87□□□□□ -0.99
TTC28-208ENST00000612946 OPLAHO14841 1288 aa8.87□□□□□ -0.99
TTC28-208ENST00000612946 CRYZL1O95825 349 aa8.87□□□□□ -0.99
TTC28-208ENST00000612946 SULT2A1Q06520 285 aa8.87□□□□□ -0.99
TTC28-208ENST00000612946 CDH17Q12864 832 aa8.87□□□□□ -0.99
TTC28-208ENST00000612946 SPOUT1Q5T280 376 aaKnown RBP8.87□□□□□ -0.99
TTC28-208ENST00000612946 UNC5BQ8IZJ1 945 aa8.87□□□□□ -0.99
TTC28-208ENST00000612946 TLCD1Q96CP7 247 aa8.87□□□□□ -0.99
TTC28-208ENST00000612946 HGH1Q9BTY7 390 aa8.87□□□□□ -0.99
TTC28-208ENST00000612946 CLPBQ9H078 707 aa8.87□□□□□ -0.99
TTC28-208ENST00000612946 SMCO3A2RU48 225 aa8.87□□□□□ -0.99
TTC28-208ENST00000612946 H3BN98 237 aa8.87□□□□□ -0.99
TTC28-208ENST00000612946 I3L521 148 aa8.87□□□□□ -0.99
TTC28-208ENST00000612946 MSR1P21757 451 aa8.87□□□□□ -0.99
TTC28-208ENST00000612946 PRKCIP41743 596 aa8.87□□□□□ -0.99
TTC28-208ENST00000612946 TDGQ13569 410 aa8.87□□□□□ -0.99
TTC28-208ENST00000612946 CA9Q16790 459 aa8.87□□□□□ -0.99
TTC28-208ENST00000612946 NECAB2Q7Z6G3 386 aa8.87□□□□□ -0.99
TTC28-208ENST00000612946 ZNF496Q96IT1 587 aaPredicted RBP8.87□□□□□ -0.99
TTC28-208ENST00000612946 ARL5BQ96KC2 179 aa8.87□□□□□ -0.99
TTC28-208ENST00000612946 SIK2Q9H0K1 926 aa8.87□□□□□ -0.99
TTC28-208ENST00000612946 SLC25A13Q9UJS0 675 aa8.87□□□□□ -0.99
TTC28-208ENST00000612946 DHRS7Q9Y394 339 aa8.87□□□□□ -0.99
TTC28-208ENST00000612946 APOC4-APOC2K7ER74 178 aa8.87□□□□□ -0.99
TTC28-208ENST00000612946 APOC2P02655 101 aa8.87□□□□□ -0.99
TTC28-208ENST00000612946 POU1F1P28069 291 aa8.87□□□□□ -0.99
TTC28-208ENST00000612946 ALDH6A1Q02252 535 aaKnown RBP8.87□□□□□ -0.99
TTC28-208ENST00000612946 CDC16Q13042 620 aa8.87□□□□□ -0.99
TTC28-208ENST00000612946 EPHA7Q15375 998 aa8.87□□□□□ -0.99
TTC28-208ENST00000612946 TRABD2AQ86V40 505 aa8.87□□□□□ -0.99
TTC28-208ENST00000612946 DIRAS2Q96HU8 199 aa8.87□□□□□ -0.99
TTC28-208ENST00000612946 ZNF717Q9BY31 904 aaPredicted RBP8.87□□□□□ -0.99
TTC28-208ENST00000612946 IL22Q9GZX6 179 aa8.87□□□□□ -0.99
TTC28-208ENST00000612946 FOXN1O15353 648 aa8.87□□□□□ -0.99
TTC28-208ENST00000612946 PTRHD1Q6GMV3 140 aaKnown RBP8.87□□□□□ -0.99
TTC28-208ENST00000612946 PHB2Q99623 299 aa8.87□□□□□ -0.99
TTC28-208ENST00000612946 NT5C1AQ9BXI3 368 aa8.87□□□□□ -0.99
TTC28-208ENST00000612946 STK32BQ9NY57 414 aa8.87□□□□□ -0.99
TTC28-208ENST00000612946 PDE10AQ9Y233 779 aa8.87□□□□□ -0.99
TTC28-208ENST00000612946 MED24O75448 989 aa8.87□□□□□ -0.99
TTC28-208ENST00000612946 GSTM1P09488 218 aa8.87□□□□□ -0.99
TTC28-208ENST00000612946 SOAT1P35610 550 aa8.87□□□□□ -0.99
TTC28-208ENST00000612946 E2F2Q14209 437 aa8.87□□□□□ -0.99
TTC28-208ENST00000612946 GET4Q7L5D6 327 aaPredicted RBP8.87□□□□□ -0.99
TTC28-208ENST00000612946 GNEQ9Y223 722 aaKnown RBP8.87□□□□□ -0.99
TTC28-208ENST00000612946 KCNE2Q9Y6J6 123 aa8.87□□□□□ -0.99
TTC28-208ENST00000612946 AIREO43918 545 aa8.86□□□□□ -0.99
TTC28-208ENST00000612946 PTTG1O95997 202 aa8.86□□□□□ -0.99
TTC28-208ENST00000612946 CASP1P29466 404 aa8.86□□□□□ -0.99
TTC28-208ENST00000612946 NNMTP40261 264 aa8.86□□□□□ -0.99
TTC28-208ENST00000612946 EMC2Q15006 297 aa8.86□□□□□ -0.99
TTC28-208ENST00000612946 NR6A1Q15406 480 aa8.86□□□□□ -0.99
TTC28-208ENST00000612946 PRR5LQ6MZQ0 368 aa8.86□□□□□ -0.99
TTC28-208ENST00000612946 HAGHLQ6PII5 290 aaPredicted RBP8.86□□□□□ -0.99
TTC28-208ENST00000612946 SPOCD1Q6ZMY3 1216 aa8.86□□□□□ -0.99
TTC28-208ENST00000612946 SRFBP1Q8NEF9 429 aaKnown RBP8.86□□□□□ -0.99
TTC28-208ENST00000612946 PRKAG3Q9UGI9 489 aa8.86□□□□□ -0.99
TTC28-208ENST00000612946 UBQLN2Q9UHD9 624 aa8.86□□□□□ -0.99
TTC28-208ENST00000612946 SLC30A4O14863 429 aa8.86□□□□□ -0.99
TTC28-208ENST00000612946 SULT1E1P49888 294 aa8.86□□□□□ -0.99
TTC28-208ENST00000612946 RPL10AP62906 217 aaKnown RBP8.86□□□□□ -0.99
TTC28-208ENST00000612946 MPP1Q00013 466 aa8.86□□□□□ -0.99
TTC28-208ENST00000612946 CUL2Q13617 745 aa8.86□□□□□ -0.99
TTC28-208ENST00000612946 TCEAL4Q96EI5 215 aa8.86□□□□□ -0.99
TTC28-208ENST00000612946 KANTRA0A1W2PQU2 76 aa8.86□□□□□ -0.99
TTC28-208ENST00000612946 CLCA1A8K7I4 914 aa8.86□□□□□ -0.99
TTC28-208ENST00000612946 BTBD19C9JJ37 291 aa8.86□□□□□ -0.99
TTC28-208ENST00000612946 STX16-NPEPL1H3BU86 382 aa8.86□□□□□ -0.99
TTC28-208ENST00000612946 STX16O14662 325 aa8.86□□□□□ -0.99
TTC28-208ENST00000612946 NDUFS2O75306 463 aa8.86□□□□□ -0.99
TTC28-208ENST00000612946 KCTD2Q14681 263 aa8.86□□□□□ -0.99
TTC28-208ENST00000612946 COBLL1Q53SF7 1204 aa8.86□□□□□ -0.99
TTC28-208ENST00000612946 ANGEL2Q5VTE6 544 aaKnown RBP8.86□□□□□ -0.99
TTC28-208ENST00000612946 CPA5Q8WXQ8 436 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms