RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 CSTF1Q05048 431 aaKnown RBP9.03□□□□□ -0.96
SMAD4-217ENST00000611848 SULT2A1Q06520 285 aa9.03□□□□□ -0.96
SMAD4-217ENST00000611848 TCF15Q12870 199 aa9.03□□□□□ -0.96
SMAD4-217ENST00000611848 CRY1Q16526 586 aa9.03□□□□□ -0.96
SMAD4-217ENST00000611848 CCNG2Q16589 344 aa9.03□□□□□ -0.96
SMAD4-217ENST00000611848 KCTD19Q17RG1 926 aaPredicted RBP9.03□□□□□ -0.96
SMAD4-217ENST00000611848 PLEKHG6Q3KR16 790 aa9.03□□□□□ -0.96
SMAD4-217ENST00000611848 BOLA3Q53S33 107 aa9.03□□□□□ -0.96
SMAD4-217ENST00000611848 ALFQ53S48 1182 aa9.03□□□□□ -0.96
SMAD4-217ENST00000611848 FSCBQ5H9T9 825 aa9.03□□□□□ -0.96
SMAD4-217ENST00000611848 C6orf118Q5T5N4 469 aa9.03□□□□□ -0.96
SMAD4-217ENST00000611848 AGBL2Q5U5Z8 902 aa9.03□□□□□ -0.96
SMAD4-217ENST00000611848 EGFLAMQ63HQ2 1017 aa9.03□□□□□ -0.96
SMAD4-217ENST00000611848 TMEM215Q68D42 235 aa9.03□□□□□ -0.96
SMAD4-217ENST00000611848 CIR1Q86X95 450 aaPredicted RBP9.03□□□□□ -0.96
SMAD4-217ENST00000611848 CHPFQ8IZ52 775 aa9.03□□□□□ -0.96
SMAD4-217ENST00000611848 MAML2Q8IZL2 1156 aaPredicted RBP9.03□□□□□ -0.96
SMAD4-217ENST00000611848 SH2D3CQ8N5H7 860 aa9.03□□□□□ -0.96
SMAD4-217ENST00000611848 TXNDC5Q8NBS9 432 aaKnown RBP9.03□□□□□ -0.96
SMAD4-217ENST00000611848 PRSS33Q8NF86 280 aa9.03□□□□□ -0.96
SMAD4-217ENST00000611848 FBXO25Q8TCJ0 367 aa9.03□□□□□ -0.96
SMAD4-217ENST00000611848 UBLCP1Q8WVY7 318 aaPredicted RBP9.03□□□□□ -0.96
SMAD4-217ENST00000611848 TTC17Q96AE7 1141 aa9.03□□□□□ -0.96
SMAD4-217ENST00000611848 TBC1D31Q96DN5 1066 aa9.03□□□□□ -0.96
SMAD4-217ENST00000611848 DCBLD2Q96PD2 775 aa9.03□□□□□ -0.96
SMAD4-217ENST00000611848 GABRG3Q99928 467 aa9.03□□□□□ -0.96
SMAD4-217ENST00000611848 HERPUD2Q9BSE4 406 aa9.03□□□□□ -0.96
SMAD4-217ENST00000611848 CAPS2Q9BXY5 557 aa9.03□□□□□ -0.96
SMAD4-217ENST00000611848 CIPCQ9C0C6 399 aa9.03□□□□□ -0.96
SMAD4-217ENST00000611848 EPB41L4BQ9H329 900 aa9.03□□□□□ -0.96
SMAD4-217ENST00000611848 PABPC3Q9H361 631 aaKnown RBP9.03□□□□□ -0.96
SMAD4-217ENST00000611848 DONSONQ9NYP3 566 aa9.03□□□□□ -0.96
SMAD4-217ENST00000611848 MPP6Q9NZW5 540 aa9.03□□□□□ -0.96
SMAD4-217ENST00000611848 WHRNQ9P202 907 aa9.03□□□□□ -0.96
SMAD4-217ENST00000611848 PCSK1NQ9UHG2 260 aa9.03□□□□□ -0.96
SMAD4-217ENST00000611848 FEZ2Q9UHY8 353 aaPredicted RBP9.03□□□□□ -0.96
SMAD4-217ENST00000611848 HCN2Q9UL51 889 aa9.03□□□□□ -0.96
SMAD4-217ENST00000611848 USP18Q9UMW8 372 aa9.03□□□□□ -0.96
SMAD4-217ENST00000611848 PLA2G4CQ9UP65 541 aa9.03□□□□□ -0.96
SMAD4-217ENST00000611848 AP4E1Q9UPM8 1137 aa9.03□□□□□ -0.96
SMAD4-217ENST00000611848 CKAP5Q14008 2032 aa9.03□□□□□ -0.96
SMAD4-217ENST00000611848 SPAG17Q6Q759 2223 aa9.02□□□□□ -0.96
SMAD4-217ENST00000611848 CCDC163A0A0D9SF12 145 aa9.02□□□□□ -0.96
SMAD4-217ENST00000611848 ANTXRLA6NF34 631 aa9.02□□□□□ -0.96
SMAD4-217ENST00000611848 GOLGA6L10A6NI86 522 aa9.02□□□□□ -0.96
SMAD4-217ENST00000611848 FAM72CH0Y354 149 aa9.02□□□□□ -0.96
SMAD4-217ENST00000611848 K7ESF4 209 aa9.02□□□□□ -0.96
SMAD4-217ENST00000611848 SGK1O00141 431 aa9.02□□□□□ -0.96
SMAD4-217ENST00000611848 TP73O15350 636 aa9.02□□□□□ -0.96
SMAD4-217ENST00000611848 ADAM23O75077 832 aa9.02□□□□□ -0.96
SMAD4-217ENST00000611848 DLDP09622 509 aaKnown RBP9.02□□□□□ -0.96
SMAD4-217ENST00000611848 SP9P0CG40 484 aa9.02□□□□□ -0.96
SMAD4-217ENST00000611848 TDGF1P13385 188 aa9.02□□□□□ -0.96
SMAD4-217ENST00000611848 RHOQP17081 205 aa9.02□□□□□ -0.96
SMAD4-217ENST00000611848 OR1E1P30953 314 aa9.02□□□□□ -0.96
SMAD4-217ENST00000611848 HOXC13P31276 330 aa9.02□□□□□ -0.96
SMAD4-217ENST00000611848 PTPN7P35236 360 aa9.02□□□□□ -0.96
SMAD4-217ENST00000611848 CSKP41240 450 aa9.02□□□□□ -0.96
SMAD4-217ENST00000611848 KCNJ1P48048 391 aa9.02□□□□□ -0.96
SMAD4-217ENST00000611848 MAPKAPK2P49137 400 aa9.02□□□□□ -0.96
SMAD4-217ENST00000611848 DGKEP52429 567 aa9.02□□□□□ -0.96
SMAD4-217ENST00000611848 PMS2P54278 862 aa9.02□□□□□ -0.96
SMAD4-217ENST00000611848 SEMA3BQ13214 749 aa9.02□□□□□ -0.96
SMAD4-217ENST00000611848 ENPP2Q13822 863 aa9.02□□□□□ -0.96
SMAD4-217ENST00000611848 PTK6Q13882 451 aa9.02□□□□□ -0.96
SMAD4-217ENST00000611848 HADHQ16836 314 aaKnown RBP9.02□□□□□ -0.96
SMAD4-217ENST00000611848 FUT11Q495W5 492 aa9.02□□□□□ -0.96
SMAD4-217ENST00000611848 PITRM1Q5JRX3 1037 aa9.02□□□□□ -0.96
SMAD4-217ENST00000611848 ARTNQ5T4W7 220 aa9.02□□□□□ -0.96
SMAD4-217ENST00000611848 FAM72AQ5TYM5 149 aa9.02□□□□□ -0.96
SMAD4-217ENST00000611848 KCTD16Q68DU8 428 aa9.02□□□□□ -0.96
SMAD4-217ENST00000611848 FAM72DQ6L9T8 149 aa9.02□□□□□ -0.96
SMAD4-217ENST00000611848 CXorf57Q6NSI4 855 aaKnown RBP9.02□□□□□ -0.96
SMAD4-217ENST00000611848 RWDD4Q6NW29 188 aaKnown RBP9.02□□□□□ -0.96
SMAD4-217ENST00000611848 ZNF783Q6ZMS7 281 aa9.02□□□□□ -0.96
SMAD4-217ENST00000611848 FAM72BQ86X60 149 aa9.02□□□□□ -0.96
SMAD4-217ENST00000611848 RCOR2Q8IZ40 523 aa9.02□□□□□ -0.96
SMAD4-217ENST00000611848 CCDC33Q8N5R6 958 aa9.02□□□□□ -0.96
SMAD4-217ENST00000611848 KDM1BQ8NB78 822 aa9.02□□□□□ -0.96
SMAD4-217ENST00000611848 OR2W6PQ8NHA6 318 aa9.02□□□□□ -0.96
SMAD4-217ENST00000611848 GRK7Q8WTQ7 553 aa9.02□□□□□ -0.96
SMAD4-217ENST00000611848 C1orf54Q8WWF1 131 aa9.02□□□□□ -0.96
SMAD4-217ENST00000611848 SNRNP25Q9BV90 132 aaKnown RBP9.02□□□□□ -0.96
SMAD4-217ENST00000611848 MAGEB5Q9BZ81 275 aa9.02□□□□□ -0.96
SMAD4-217ENST00000611848 CATSPERBQ9H7T0 1116 aa9.02□□□□□ -0.96
SMAD4-217ENST00000611848 POLMQ9NP87 494 aaPredicted RBP9.02□□□□□ -0.96
SMAD4-217ENST00000611848 TMEM248Q9NWD8 314 aa9.02□□□□□ -0.96
SMAD4-217ENST00000611848 C2orf42Q9NWW7 574 aa9.02□□□□□ -0.96
SMAD4-217ENST00000611848 MTRF1LQ9UGC7 380 aaKnown RBP9.02□□□□□ -0.96
SMAD4-217ENST00000611848 INTS6Q9UL03 887 aaKnown RBP9.02□□□□□ -0.96
SMAD4-217ENST00000611848 ATP8A1Q9Y2Q0 1164 aa9.02□□□□□ -0.96
SMAD4-217ENST00000611848 NEU2Q9Y3R4 380 aa9.02□□□□□ -0.96
SMAD4-217ENST00000611848 ILVBLA1L0T0 632 aa9.02□□□□□ -0.97
SMAD4-217ENST00000611848 H0Y858 1186 aa9.02□□□□□ -0.97
SMAD4-217ENST00000611848 EIF3HO15372 352 aaKnown RBP eCLIP9.02□□□□□ -0.97
SMAD4-217ENST00000611848 FGF10O15520 208 aaPredicted RBP9.02□□□□□ -0.97
SMAD4-217ENST00000611848 CREB3O43889 395 aa9.02□□□□□ -0.97
SMAD4-217ENST00000611848 ALDH1A2O94788 518 aa9.02□□□□□ -0.97
SMAD4-217ENST00000611848 APBB3O95704 486 aa9.02□□□□□ -0.97
SMAD4-217ENST00000611848 RHOCP08134 193 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms