RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 SUFUQ9UMX1 484 aa6.47□□□□□ -1.37
SNX13-213ENST00000611725 SLC45A1Q9Y2W3 748 aa6.47□□□□□ -1.37
SNX13-213ENST00000611725 E5RI56 91 aa6.47□□□□□ -1.37
SNX13-213ENST00000611725 F5H5T6 163 aa6.47□□□□□ -1.37
SNX13-213ENST00000611725 IRAK2O43187 625 aa6.47□□□□□ -1.37
SNX13-213ENST00000611725 SIN3BO75182 1162 aa6.47□□□□□ -1.37
SNX13-213ENST00000611725 TBX10O75333 385 aa6.47□□□□□ -1.37
SNX13-213ENST00000611725 ME2P23368 584 aa6.47□□□□□ -1.37
SNX13-213ENST00000611725 MAGEA6P43360 314 aa6.47□□□□□ -1.37
SNX13-213ENST00000611725 CXCR3P49682 368 aa6.47□□□□□ -1.37
SNX13-213ENST00000611725 RABGGTBP53611 331 aa6.47□□□□□ -1.37
SNX13-213ENST00000611725 NSUN2Q08J23 767 aaKnown RBP eCLIP6.47□□□□□ -1.37
SNX13-213ENST00000611725 SREBF2Q12772 1141 aa6.47□□□□□ -1.37
SNX13-213ENST00000611725 KLF10Q13118 480 aa6.47□□□□□ -1.37
SNX13-213ENST00000611725 VEPH1Q14D04 833 aa6.47□□□□□ -1.37
SNX13-213ENST00000611725 ARL13AQ5H913 290 aaPredicted RBP6.47□□□□□ -1.37
SNX13-213ENST00000611725 VWA5B1Q5TIE3 1220 aa6.47□□□□□ -1.37
SNX13-213ENST00000611725 FAM171A1Q5VUB5 890 aa6.47□□□□□ -1.37
SNX13-213ENST00000611725 SDHAF4Q5VUM1 108 aa6.47□□□□□ -1.37
SNX13-213ENST00000611725 RGMBQ6NW40 437 aa6.47□□□□□ -1.37
SNX13-213ENST00000611725 SLC30A9Q6PML9 568 aa6.47□□□□□ -1.37
SNX13-213ENST00000611725 KIAA0408Q6ZU52 694 aa6.47□□□□□ -1.37
SNX13-213ENST00000611725 TREML1Q86YW5 311 aa6.47□□□□□ -1.37
SNX13-213ENST00000611725 SH3TC2Q8TF17 1288 aa6.47□□□□□ -1.37
SNX13-213ENST00000611725 CENPKQ9BS16 269 aa6.47□□□□□ -1.37
SNX13-213ENST00000611725 SYTL2Q9HCH5 934 aa6.47□□□□□ -1.37
SNX13-213ENST00000611725 KANSL3Q9P2N6 904 aa6.47□□□□□ -1.37
SNX13-213ENST00000611725 FBXW11Q9UKB1 542 aa6.47□□□□□ -1.37
SNX13-213ENST00000611725 ANKRD6Q9Y2G4 727 aa6.47□□□□□ -1.37
SNX13-213ENST00000611725 DDX60Q8IY21 1712 aaKnown RBP6.47□□□□□ -1.37
SNX13-213ENST00000611725 RBM47A0AV96 593 aaKnown RBP6.47□□□□□ -1.37
SNX13-213ENST00000611725 TK2O00142 265 aa6.47□□□□□ -1.37
SNX13-213ENST00000611725 BUD23O43709 281 aaKnown RBP6.47□□□□□ -1.37
SNX13-213ENST00000611725 RHOBTB1O94844 696 aa6.47□□□□□ -1.37
SNX13-213ENST00000611725 COX4I1P13073 169 aa6.47□□□□□ -1.37
SNX13-213ENST00000611725 VAV1P15498 845 aa6.47□□□□□ -1.37
SNX13-213ENST00000611725 SLC11A2P49281 568 aa6.47□□□□□ -1.37
SNX13-213ENST00000611725 HARS2P49590 506 aaKnown RBP6.47□□□□□ -1.37
SNX13-213ENST00000611725 MSLNQ13421 630 aaPredicted RBP6.47□□□□□ -1.37
SNX13-213ENST00000611725 HNRNPDQ14103 355 aaKnown RBP6.47□□□□□ -1.37
SNX13-213ENST00000611725 DHDDSQ86SQ9 333 aa6.47□□□□□ -1.37
SNX13-213ENST00000611725 CENPIQ92674 756 aaPredicted RBP6.47□□□□□ -1.37
SNX13-213ENST00000611725 CLPTM1LQ96KA5 538 aa6.47□□□□□ -1.37
SNX13-213ENST00000611725 DHRS4Q9BTZ2 278 aa6.47□□□□□ -1.37
SNX13-213ENST00000611725 MTMR10Q9NXD2 777 aa6.47□□□□□ -1.37
SNX13-213ENST00000611725 UTP6Q9NYH9 597 aaKnown RBP6.47□□□□□ -1.37
SNX13-213ENST00000611725 PCDHB12Q9Y5F1 795 aa6.47□□□□□ -1.37
SNX13-213ENST00000611725 DOCK2Q92608 1830 aa6.47□□□□□ -1.37
SNX13-213ENST00000611725 USP1O94782 785 aa6.47□□□□□ -1.37
SNX13-213ENST00000611725 PFKMP08237 780 aa6.47□□□□□ -1.37
SNX13-213ENST00000611725 OR4Q2P0C623 313 aa6.47□□□□□ -1.37
SNX13-213ENST00000611725 HOXD10P28358 340 aa6.47□□□□□ -1.37
SNX13-213ENST00000611725 OR1E1P30953 314 aa6.47□□□□□ -1.37
SNX13-213ENST00000611725 RAB10P61026 200 aa6.47□□□□□ -1.37
SNX13-213ENST00000611725 CDK18Q07002 472 aa6.47□□□□□ -1.37
SNX13-213ENST00000611725 TCHHL1Q5QJ38 904 aaPredicted RBP6.47□□□□□ -1.37
SNX13-213ENST00000611725 MARCH8Q5T0T0 291 aa6.47□□□□□ -1.37
SNX13-213ENST00000611725 RDH11Q8TC12 318 aa6.47□□□□□ -1.37
SNX13-213ENST00000611725 RAET1EQ8TD07 263 aa6.47□□□□□ -1.37
SNX13-213ENST00000611725 SLC25A23Q9BV35 468 aa6.47□□□□□ -1.37
SNX13-213ENST00000611725 MKS1Q9NXB0 559 aa6.47□□□□□ -1.37
SNX13-213ENST00000611725 VPS9D1Q9Y2B5 631 aa6.47□□□□□ -1.37
SNX13-213ENST00000611725 MYH7P12883 1935 aa6.47□□□□□ -1.37
SNX13-213ENST00000611725 TMEM114B3SHH9 223 aa6.46□□□□□ -1.37
SNX13-213ENST00000611725 GLP2RO95838 553 aa6.46□□□□□ -1.37
SNX13-213ENST00000611725 COL6A2P12110 1019 aa6.46□□□□□ -1.37
SNX13-213ENST00000611725 CCNCP24863 283 aa6.46□□□□□ -1.37
SNX13-213ENST00000611725 CACNA2D1P54289 1103 aa6.46□□□□□ -1.37
SNX13-213ENST00000611725 TWF1Q12792 350 aa6.46□□□□□ -1.37
SNX13-213ENST00000611725 HABP4Q5JVS0 413 aaKnown RBP6.46□□□□□ -1.37
SNX13-213ENST00000611725 LRRC8EQ6NSJ5 796 aa6.46□□□□□ -1.37
SNX13-213ENST00000611725 NET1Q7Z628 596 aaPredicted RBP6.46□□□□□ -1.37
SNX13-213ENST00000611725 USP13Q92995 863 aaPredicted RBP6.46□□□□□ -1.37
SNX13-213ENST00000611725 LENG8Q96PV6 779 aaPredicted RBP6.46□□□□□ -1.37
SNX13-213ENST00000611725 SEMA3CQ99985 751 aa6.46□□□□□ -1.37
SNX13-213ENST00000611725 LATS2Q9NRM7 1088 aa6.46□□□□□ -1.37
SNX13-213ENST00000611725 RGS18Q9NS28 235 aa6.46□□□□□ -1.37
SNX13-213ENST00000611725 MFHAS1Q9Y4C4 1052 aa6.46□□□□□ -1.37
SNX13-213ENST00000611725 WASF2Q9Y6W5 498 aa6.46□□□□□ -1.37
SNX13-213ENST00000611725 MEIS3P2A8K0S8 358 aa6.46□□□□□ -1.37
SNX13-213ENST00000611725 TPST1O60507 370 aa6.46□□□□□ -1.37
SNX13-213ENST00000611725 PRKAR2AP13861 404 aaKnown RBP6.46□□□□□ -1.37
SNX13-213ENST00000611725 SLC5A3P53794 718 aa6.46□□□□□ -1.37
SNX13-213ENST00000611725 OXCT1P55809 520 aa6.46□□□□□ -1.37
SNX13-213ENST00000611725 MAXP61244 160 aa6.46□□□□□ -1.37
SNX13-213ENST00000611725 IRX1P78414 480 aaPredicted RBP6.46□□□□□ -1.37
SNX13-213ENST00000611725 PAFAH1B3Q15102 231 aaKnown RBP6.46□□□□□ -1.37
SNX13-213ENST00000611725 C6orf10Q5SRN2 563 aa6.46□□□□□ -1.37
SNX13-213ENST00000611725 SPATA6LQ8N4H0 392 aa6.46□□□□□ -1.37
SNX13-213ENST00000611725 AZIN2Q96A70 460 aa6.46□□□□□ -1.37
SNX13-213ENST00000611725 CORO1CQ9ULV4 474 aaPredicted RBP6.46□□□□□ -1.37
SNX13-213ENST00000611725 MYO5AQ9Y4I1 1855 aaKnown RBP6.46□□□□□ -1.38
SNX13-213ENST00000611725 ABCA3Q99758 1704 aa6.46□□□□□ -1.38
SNX13-213ENST00000611725 PTGESO14684 152 aa6.46□□□□□ -1.38
SNX13-213ENST00000611725 CHRM3P20309 590 aa6.46□□□□□ -1.38
SNX13-213ENST00000611725 PSEN1P49768 467 aa6.46□□□□□ -1.38
SNX13-213ENST00000611725 MLLT6P55198 1093 aaPredicted RBP6.46□□□□□ -1.38
SNX13-213ENST00000611725 DDR2Q16832 855 aa6.46□□□□□ -1.38
SNX13-213ENST00000611725 AGKQ53H12 422 aa6.46□□□□□ -1.38
SNX13-213ENST00000611725 AP1ARQ63HQ0 302 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms