RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 IGLV3-10A0A075B6K4 115 aa28.49■■■□□ 2.15
CSPG5-205ENST00000610462 HOXA2O43364 376 aa28.49■■■□□ 2.15
CSPG5-205ENST00000610462 VNN2O95498 520 aa28.49■■■□□ 2.15
CSPG5-205ENST00000610462 HAPLN1P10915 354 aaPredicted RBP28.49■■■□□ 2.15
CSPG5-205ENST00000610462 GTF2A1P52655 376 aaPredicted RBP28.49■■■□□ 2.15
CSPG5-205ENST00000610462 RASIP1Q5U651 963 aa28.49■■■□□ 2.15
CSPG5-205ENST00000610462 POTEHQ6S545 545 aa28.49■■■□□ 2.15
CSPG5-205ENST00000610462 PPHLN1Q8NEY8 458 aaKnown RBP28.49■■■□□ 2.15
CSPG5-205ENST00000610462 SEPT5Q99719 369 aaPredicted RBP28.49■■■□□ 2.15
CSPG5-205ENST00000610462 TMEM175Q9BSA9 504 aa28.49■■■□□ 2.15
CSPG5-205ENST00000610462 MARCH2Q9P0N8 246 aa28.49■■■□□ 2.15
CSPG5-205ENST00000610462 H7C4K7 107 aa28.49■■■□□ 2.15
CSPG5-205ENST00000610462 PEX11BO96011 259 aa28.49■■■□□ 2.15
CSPG5-205ENST00000610462 F7P08709 466 aaPredicted RBP28.49■■■□□ 2.15
CSPG5-205ENST00000610462 KCNA4P22459 653 aa28.49■■■□□ 2.15
CSPG5-205ENST00000610462 TCTN1Q2MV58 587 aa28.49■■■□□ 2.15
CSPG5-205ENST00000610462 RTP2Q5QGT7 225 aa28.49■■■□□ 2.15
CSPG5-205ENST00000610462 TFAP2DQ7Z6R9 452 aa28.49■■■□□ 2.15
CSPG5-205ENST00000610462 PTCD2Q8WV60 388 aaKnown RBP28.49■■■□□ 2.15
CSPG5-205ENST00000610462 UTP4Q969X6 686 aaKnown RBP28.49■■■□□ 2.15
CSPG5-205ENST00000610462 VPS39Q96JC1 886 aa28.49■■■□□ 2.15
CSPG5-205ENST00000610462 MIA3Q5JRA6 1907 aa28.48■■■□□ 2.15
CSPG5-205ENST00000610462 PITPNM1O00562 1244 aa28.48■■■□□ 2.15
CSPG5-205ENST00000610462 PMPCBO75439 489 aa28.48■■■□□ 2.15
CSPG5-205ENST00000610462 HADHAP40939 763 aa28.48■■■□□ 2.15
CSPG5-205ENST00000610462 HNRNPDQ14103 355 aaKnown RBP28.48■■■□□ 2.15
CSPG5-205ENST00000610462 POU6F1Q14863 301 aa28.48■■■□□ 2.15
CSPG5-205ENST00000610462 HSF5Q4G112 596 aaPredicted RBP28.48■■■□□ 2.15
CSPG5-205ENST00000610462 C10orf120Q5SQS8 335 aa28.48■■■□□ 2.15
CSPG5-205ENST00000610462 SWT1Q5T5J6 900 aaKnown RBP28.48■■■□□ 2.15
CSPG5-205ENST00000610462 MIB1Q86YT6 1006 aa28.48■■■□□ 2.15
CSPG5-205ENST00000610462 CRIPAKQ8N1N5 446 aa28.48■■■□□ 2.15
CSPG5-205ENST00000610462 MRGPRX2Q96LB1 330 aa28.48■■■□□ 2.15
CSPG5-205ENST00000610462 FSD1LQ9BXM9 530 aa28.48■■■□□ 2.15
CSPG5-205ENST00000610462 MRPL9Q9BYD2 267 aaKnown RBP28.48■■■□□ 2.15
CSPG5-205ENST00000610462 MRM3Q9HC36 420 aaKnown RBP28.48■■■□□ 2.15
CSPG5-205ENST00000610462 COPG2Q9UBF2 871 aa28.48■■■□□ 2.15
CSPG5-205ENST00000610462 CCDC78A2IDD5 438 aa28.47■■■□□ 2.15
CSPG5-205ENST00000610462 CNTN5O94779 1100 aa28.47■■■□□ 2.15
CSPG5-205ENST00000610462 GALTP07902 379 aa28.47■■■□□ 2.15
CSPG5-205ENST00000610462 ALFQ53S48 1182 aa28.47■■■□□ 2.15
CSPG5-205ENST00000610462 FAM91A1Q658Y4 838 aa28.47■■■□□ 2.15
CSPG5-205ENST00000610462 RANBP10Q6VN20 620 aa28.47■■■□□ 2.15
CSPG5-205ENST00000610462 C10orf107Q8IVU9 208 aa28.47■■■□□ 2.15
CSPG5-205ENST00000610462 HMCESQ96FZ2 354 aa28.47■■■□□ 2.15
CSPG5-205ENST00000610462 WWP1Q9H0M0 922 aa28.47■■■□□ 2.15
CSPG5-205ENST00000610462 SLC25A51Q9H1U9 297 aa28.47■■■□□ 2.15
CSPG5-205ENST00000610462 ZNF358Q9NW07 568 aa28.47■■■□□ 2.15
CSPG5-205ENST00000610462 TCAF1Q9Y4C2 921 aa28.47■■■□□ 2.15
CSPG5-205ENST00000610462 A0A096LPK6 155 aa28.47■■■□□ 2.15
CSPG5-205ENST00000610462 NT5C1B-RDH14C9J2C7 533 aa28.47■■■□□ 2.15
CSPG5-205ENST00000610462 GOLGA8TH3BQL2 631 aa28.47■■■□□ 2.15
CSPG5-205ENST00000610462 IGLV3-27P01718 113 aa28.47■■■□□ 2.15
CSPG5-205ENST00000610462 SERPINE1P05121 402 aa28.47■■■□□ 2.15
CSPG5-205ENST00000610462 PTPN4P29074 926 aa28.47■■■□□ 2.15
CSPG5-205ENST00000610462 GMPRP36959 345 aa28.47■■■□□ 2.15
CSPG5-205ENST00000610462 ABCG1P45844 678 aa28.47■■■□□ 2.15
CSPG5-205ENST00000610462 RENBPP51606 427 aa28.47■■■□□ 2.15
CSPG5-205ENST00000610462 PRMT2P55345 433 aa28.47■■■□□ 2.15
CSPG5-205ENST00000610462 KRT72Q14CN4 511 aa28.47■■■□□ 2.15
CSPG5-205ENST00000610462 ARHGEF6Q15052 776 aa28.47■■■□□ 2.15
CSPG5-205ENST00000610462 CLEC14AQ86T13 490 aa28.47■■■□□ 2.15
CSPG5-205ENST00000610462 PLD6Q8N2A8 252 aaKnown RBP28.47■■■□□ 2.15
CSPG5-205ENST00000610462 C2orf15Q8WU43 125 aaKnown RBP28.47■■■□□ 2.15
CSPG5-205ENST00000610462 CAB39LQ9H9S4 337 aa28.47■■■□□ 2.15
CSPG5-205ENST00000610462 CD248Q9HCU0 757 aa28.47■■■□□ 2.15
CSPG5-205ENST00000610462 ARL8BQ9NVJ2 186 aa28.47■■■□□ 2.15
CSPG5-205ENST00000610462 SCN5AQ14524 2016 aa28.47■■■□□ 2.15
CSPG5-205ENST00000610462 FCHO1O14526 889 aa28.46■■■□□ 2.15
CSPG5-205ENST00000610462 KITP10721 976 aa28.46■■■□□ 2.15
CSPG5-205ENST00000610462 GRK2P25098 689 aa28.46■■■□□ 2.15
CSPG5-205ENST00000610462 SLC1A6P48664 564 aa28.46■■■□□ 2.15
CSPG5-205ENST00000610462 RAP1GAP2Q684P5 730 aa28.46■■■□□ 2.15
CSPG5-205ENST00000610462 FBXL22Q6P050 247 aa28.46■■■□□ 2.15
CSPG5-205ENST00000610462 ANKS3Q6ZW76 656 aa28.46■■■□□ 2.15
CSPG5-205ENST00000610462 PTCD3Q96EY7 689 aaKnown RBP28.46■■■□□ 2.15
CSPG5-205ENST00000610462 PRR11Q96HE9 360 aaPredicted RBP28.46■■■□□ 2.15
CSPG5-205ENST00000610462 NSL1Q96IY1 281 aa28.46■■■□□ 2.15
CSPG5-205ENST00000610462 GPR22Q99680 433 aa28.46■■■□□ 2.15
CSPG5-205ENST00000610462 OXCT2Q9BYC2 517 aaPredicted RBP28.46■■■□□ 2.15
CSPG5-205ENST00000610462 SLC12A8A0AV02 714 aa28.46■■■□□ 2.15
CSPG5-205ENST00000610462 E2F8A0AVK6 867 aa28.46■■■□□ 2.15
CSPG5-205ENST00000610462 FKTNO75072 461 aa28.46■■■□□ 2.15
CSPG5-205ENST00000610462 AQP5P55064 265 aa28.46■■■□□ 2.15
CSPG5-205ENST00000610462 ACBD5Q5T8D3 534 aaPredicted RBP28.46■■■□□ 2.15
CSPG5-205ENST00000610462 KDELC1Q6UW63 502 aa28.46■■■□□ 2.15
CSPG5-205ENST00000610462 CNTN4Q8IWV2 1026 aa28.46■■■□□ 2.15
CSPG5-205ENST00000610462 DDX51Q8N8A6 666 aaKnown RBP eCLIP28.46■■■□□ 2.15
CSPG5-205ENST00000610462 IGSF8Q969P0 613 aa28.46■■■□□ 2.15
CSPG5-205ENST00000610462 TBC1D10AQ9BXI6 508 aa28.46■■■□□ 2.15
CSPG5-205ENST00000610462 RHOJQ9H4E5 214 aa28.46■■■□□ 2.15
CSPG5-205ENST00000610462 MARCOQ9UEW3 520 aaPredicted RBP28.46■■■□□ 2.15
CSPG5-205ENST00000610462 DRGXA6NNA5 263 aa28.45■■■□□ 2.14
CSPG5-205ENST00000610462 TBKBP1A7MCY6 615 aa28.45■■■□□ 2.14
CSPG5-205ENST00000610462 ITM2AO43736 263 aa28.45■■■□□ 2.14
CSPG5-205ENST00000610462 C2P06681 752 aa28.45■■■□□ 2.14
CSPG5-205ENST00000610462 CPA3P15088 417 aa28.45■■■□□ 2.14
CSPG5-205ENST00000610462 RING1Q06587 406 aa28.45■■■□□ 2.14
CSPG5-205ENST00000610462 DUSP4Q13115 394 aa28.45■■■□□ 2.14
CSPG5-205ENST00000610462 ZC3HC1Q86WB0 502 aaKnown RBP28.45■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms