RNA–Protein interactions for RNA: ENST00000607055.1

NECAB3-221, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 4

Gene NECAB3, Length 554 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-221ENST00000607055 MATN3O15232 486 aa22.02■■□□□ 1.12
NECAB3-221ENST00000607055 ADAM23O75077 832 aa22.02■■□□□ 1.12
NECAB3-221ENST00000607055 PEX11BO96011 259 aa22.02■■□□□ 1.12
NECAB3-221ENST00000607055 EPHX1P07099 455 aa22.02■■□□□ 1.12
NECAB3-221ENST00000607055 RBP3P10745 1247 aa22.02■■□□□ 1.12
NECAB3-221ENST00000607055 RPS9P46781 194 aaKnown RBP22.02■■□□□ 1.12
NECAB3-221ENST00000607055 SLC10A7Q0GE19 358 aa22.02■■□□□ 1.12
NECAB3-221ENST00000607055 XRCC4Q13426 336 aa22.02■■□□□ 1.12
NECAB3-221ENST00000607055 ENPP2Q13822 863 aa22.02■■□□□ 1.12
NECAB3-221ENST00000607055 LBRQ14739 615 aaKnown RBP22.02■■□□□ 1.12
NECAB3-221ENST00000607055 PRKD1Q15139 912 aaPredicted RBP22.02■■□□□ 1.12
NECAB3-221ENST00000607055 CYTH1Q15438 398 aa22.02■■□□□ 1.12
NECAB3-221ENST00000607055 SIX1Q15475 284 aaPredicted RBP22.02■■□□□ 1.12
NECAB3-221ENST00000607055 HSF5Q4G112 596 aaPredicted RBP22.02■■□□□ 1.12
NECAB3-221ENST00000607055 INO80DQ53TQ3 878 aaPredicted RBP22.02■■□□□ 1.12
NECAB3-221ENST00000607055 EOGTQ5NDL2 527 aa22.02■■□□□ 1.12
NECAB3-221ENST00000607055 C22orf39Q6P5X5 142 aa22.02■■□□□ 1.12
NECAB3-221ENST00000607055 CASKIN2Q8WXE0 1202 aa22.02■■□□□ 1.12
NECAB3-221ENST00000607055 NAP1L3Q99457 506 aaPredicted RBP22.02■■□□□ 1.12
NECAB3-221ENST00000607055 GABRG3Q99928 467 aa22.02■■□□□ 1.12
NECAB3-221ENST00000607055 C10orf88Q9H8K7 445 aa22.02■■□□□ 1.12
NECAB3-221ENST00000607055 POLR3BQ9NW08 1133 aaPredicted RBP22.02■■□□□ 1.12
NECAB3-221ENST00000607055 SEPT10Q9P0V9 454 aa22.02■■□□□ 1.12
NECAB3-221ENST00000607055 MMP17Q9ULZ9 603 aa22.02■■□□□ 1.12
NECAB3-221ENST00000607055 FAM86C2PA6NEL3 165 aa22.01■■□□□ 1.11
NECAB3-221ENST00000607055 CHURC1-FNTBB4DL54 471 aa22.01■■□□□ 1.11
NECAB3-221ENST00000607055 KCNK1O00180 336 aa22.01■■□□□ 1.11
NECAB3-221ENST00000607055 BNIP3LO60238 219 aa22.01■■□□□ 1.11
NECAB3-221ENST00000607055 ATG13O75143 517 aa22.01■■□□□ 1.11
NECAB3-221ENST00000607055 HOXB2P14652 356 aa22.01■■□□□ 1.11
NECAB3-221ENST00000607055 VAV1P15498 845 aa22.01■■□□□ 1.11
NECAB3-221ENST00000607055 CLCN5P51795 746 aa22.01■■□□□ 1.11
NECAB3-221ENST00000607055 ZNF33AQ06730 810 aa22.01■■□□□ 1.11
NECAB3-221ENST00000607055 RFTN1Q14699 578 aaPredicted RBP22.01■■□□□ 1.11
NECAB3-221ENST00000607055 HNRNPA1L2Q32P51 320 aaKnown RBP22.01■■□□□ 1.11
NECAB3-221ENST00000607055 SLC45A4Q5BKX6 768 aa22.01■■□□□ 1.11
NECAB3-221ENST00000607055 DARS2Q6PI48 645 aaKnown RBP22.01■■□□□ 1.11
NECAB3-221ENST00000607055 Q6ZVU0 165 aa22.01■■□□□ 1.11
NECAB3-221ENST00000607055 METTL3Q86U44 580 aaKnown RBP22.01■■□□□ 1.11
NECAB3-221ENST00000607055 CDKL3Q8IVW4 592 aaPredicted RBP22.01■■□□□ 1.11
NECAB3-221ENST00000607055 FRS2Q8WU20 508 aa22.01■■□□□ 1.11
NECAB3-221ENST00000607055 CINPQ9BW66 212 aaPredicted RBP22.01■■□□□ 1.11
NECAB3-221ENST00000607055 AP1M1Q9BXS5 423 aa22.01■■□□□ 1.11
NECAB3-221ENST00000607055 CEP44Q9C0F1 390 aa22.01■■□□□ 1.11
NECAB3-221ENST00000607055 TNKS2Q9H2K2 1166 aa22.01■■□□□ 1.11
NECAB3-221ENST00000607055 SUN2Q9UH99 717 aa22.01■■□□□ 1.11
NECAB3-221ENST00000607055 ATG2BQ96BY7 2078 aa22.01■■□□□ 1.11
NECAB3-221ENST00000607055 ESPNB1AK53 854 aa22■■□□□ 1.11
NECAB3-221ENST00000607055 DLL1O00548 723 aa22■■□□□ 1.11
NECAB3-221ENST00000607055 CCNB1P14635 433 aa22■■□□□ 1.11
NECAB3-221ENST00000607055 MAGEA9P43362 315 aa22■■□□□ 1.11
NECAB3-221ENST00000607055 RHOAP61586 193 aa22■■□□□ 1.11
NECAB3-221ENST00000607055 SNX1Q13596 522 aa22■■□□□ 1.11
NECAB3-221ENST00000607055 ZNF235Q14590 738 aa22■■□□□ 1.11
NECAB3-221ENST00000607055 MARC1Q5VT66 337 aa22■■□□□ 1.11
NECAB3-221ENST00000607055 CREG2Q8IUH2 290 aa22■■□□□ 1.11
NECAB3-221ENST00000607055 SLC35B2Q8TB61 432 aa22■■□□□ 1.11
NECAB3-221ENST00000607055 MAML1Q92585 1016 aa22■■□□□ 1.11
NECAB3-221ENST00000607055 FATE1Q969F0 183 aa22■■□□□ 1.11
NECAB3-221ENST00000607055 FRMD8P1Q9BZ68 369 aaPredicted RBP22■■□□□ 1.11
NECAB3-221ENST00000607055 TM6SF2Q9BZW4 377 aa22■■□□□ 1.11
NECAB3-221ENST00000607055 DLGAP2Q9P1A6 1054 aa22■■□□□ 1.11
NECAB3-221ENST00000607055 SEPT3Q9UH03 358 aa22■■□□□ 1.11
NECAB3-221ENST00000607055 DNPEPQ9ULA0 475 aa22■■□□□ 1.11
NECAB3-221ENST00000607055 TRIOO75962 3097 aa22■■□□□ 1.11
NECAB3-221ENST00000607055 EDDM13A0A1B0GTR0 161 aa21.99■■□□□ 1.11
NECAB3-221ENST00000607055 LIASO43766 372 aa21.99■■□□□ 1.11
NECAB3-221ENST00000607055 SYNCRIPO60506 623 aaKnown RBP21.99■■□□□ 1.11
NECAB3-221ENST00000607055 NEBLO76041 1014 aa21.99■■□□□ 1.11
NECAB3-221ENST00000607055 JCHAINP01591 159 aa21.99■■□□□ 1.11
NECAB3-221ENST00000607055 RBL1P28749 1068 aa21.99■■□□□ 1.11
NECAB3-221ENST00000607055 MMP13P45452 471 aa21.99■■□□□ 1.11
NECAB3-221ENST00000607055 RENBPP51606 427 aa21.99■■□□□ 1.11
NECAB3-221ENST00000607055 MTAPQ13126 283 aa21.99■■□□□ 1.11
NECAB3-221ENST00000607055 HNRNPDQ14103 355 aaKnown RBP21.99■■□□□ 1.11
NECAB3-221ENST00000607055 STARD3Q14849 445 aa21.99■■□□□ 1.11
NECAB3-221ENST00000607055 FAM182AQ5T1J6 154 aa21.99■■□□□ 1.11
NECAB3-221ENST00000607055 HEATR6Q6AI08 1181 aaKnown RBP21.99■■□□□ 1.11
NECAB3-221ENST00000607055 BMP8AQ7Z5Y6 402 aa21.99■■□□□ 1.11
NECAB3-221ENST00000607055 BBS5Q8N3I7 341 aa21.99■■□□□ 1.11
NECAB3-221ENST00000607055 SPEM1Q8N4L4 309 aa21.99■■□□□ 1.11
NECAB3-221ENST00000607055 FBXL6Q8N531 539 aa21.99■■□□□ 1.11
NECAB3-221ENST00000607055 PCDH20Q8N6Y1 951 aaKnown RBP21.99■■□□□ 1.11
NECAB3-221ENST00000607055 PRELID2Q8N945 189 aa21.99■■□□□ 1.11
NECAB3-221ENST00000607055 PTPRN2Q92932 1015 aa21.99■■□□□ 1.11
NECAB3-221ENST00000607055 ISG20Q96AZ6 181 aaKnown RBP21.99■■□□□ 1.11
NECAB3-221ENST00000607055 EXOC2Q96KP1 924 aa21.99■■□□□ 1.11
NECAB3-221ENST00000607055 CEP41Q9BYV8 373 aa21.99■■□□□ 1.11
NECAB3-221ENST00000607055 RBM22Q9NW64 420 aaKnown RBP eCLIP21.99■■□□□ 1.11
NECAB3-221ENST00000607055 LHX3Q9UBR4 397 aa21.99■■□□□ 1.11
NECAB3-221ENST00000607055 SHROOM3Q8TF72 1996 aa21.98■■□□□ 1.11
NECAB3-221ENST00000607055 KRIT1O00522 736 aa21.98■■□□□ 1.11
NECAB3-221ENST00000607055 SIN3BO75182 1162 aa21.98■■□□□ 1.11
NECAB3-221ENST00000607055 ZNF821O75541 412 aaPredicted RBP21.98■■□□□ 1.11
NECAB3-221ENST00000607055 URI1O94763 535 aaPredicted RBP21.98■■□□□ 1.11
NECAB3-221ENST00000607055 COL9A1P20849 921 aa21.98■■□□□ 1.11
NECAB3-221ENST00000607055 PAFAH1B1P43034 410 aa21.98■■□□□ 1.11
NECAB3-221ENST00000607055 IFI35P80217 286 aaPredicted RBP21.98■■□□□ 1.11
NECAB3-221ENST00000607055 ZBTB17Q13105 803 aa21.98■■□□□ 1.11
NECAB3-221ENST00000607055 CCNG2Q16589 344 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms