RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 KCNJ1P48048 391 aa7.82□□□□□ -1.16
MSH6-211ENST00000606499 GDF10P55107 478 aa7.82□□□□□ -1.16
MSH6-211ENST00000606499 GEMIN4P57678 1058 aaKnown RBP7.82□□□□□ -1.16
MSH6-211ENST00000606499 ST8SIA6P61647 398 aa7.82□□□□□ -1.16
MSH6-211ENST00000606499 IFI35P80217 286 aaPredicted RBP7.82□□□□□ -1.16
MSH6-211ENST00000606499 SULT2A1Q06520 285 aa7.82□□□□□ -1.16
MSH6-211ENST00000606499 C2orf54Q08AI8 447 aa7.82□□□□□ -1.16
MSH6-211ENST00000606499 WASHC5Q12768 1159 aa7.82□□□□□ -1.16
MSH6-211ENST00000606499 XRCC4Q13426 336 aa7.82□□□□□ -1.16
MSH6-211ENST00000606499 FZD5Q13467 585 aa7.82□□□□□ -1.16
MSH6-211ENST00000606499 ZNF235Q14590 738 aa7.82□□□□□ -1.16
MSH6-211ENST00000606499 LBRQ14739 615 aaKnown RBP7.82□□□□□ -1.16
MSH6-211ENST00000606499 CYTH1Q15438 398 aa7.82□□□□□ -1.16
MSH6-211ENST00000606499 CCNG2Q16589 344 aa7.82□□□□□ -1.16
MSH6-211ENST00000606499 ACCSLQ4AC99 568 aa7.82□□□□□ -1.16
MSH6-211ENST00000606499 DGKKQ5KSL6 1271 aa7.82□□□□□ -1.16
MSH6-211ENST00000606499 DNTTIP2Q5QJE6 756 aaKnown RBP7.82□□□□□ -1.16
MSH6-211ENST00000606499 TMCO4Q5TGY1 634 aa7.82□□□□□ -1.16
MSH6-211ENST00000606499 CWF19L1Q69YN2 538 aaKnown RBP7.82□□□□□ -1.16
MSH6-211ENST00000606499 HEATR6Q6AI08 1181 aaKnown RBP7.82□□□□□ -1.16
MSH6-211ENST00000606499 TIGD7Q6NT04 549 aaPredicted RBP7.82□□□□□ -1.16
MSH6-211ENST00000606499 C22orf39Q6P5X5 142 aa7.82□□□□□ -1.16
MSH6-211ENST00000606499 SERPINA13PQ6UXR4 307 aa7.82□□□□□ -1.16
MSH6-211ENST00000606499 TRIM67Q6ZTA4 783 aa7.82□□□□□ -1.16
MSH6-211ENST00000606499 Q6ZVU0 165 aa7.82□□□□□ -1.16
MSH6-211ENST00000606499 BZW1Q7L1Q6 419 aaKnown RBP7.82□□□□□ -1.16
MSH6-211ENST00000606499 LRRC49Q8IUZ0 686 aa7.82□□□□□ -1.16
MSH6-211ENST00000606499 CHPFQ8IZ52 775 aa7.82□□□□□ -1.16
MSH6-211ENST00000606499 KMT2EQ8IZD2 1858 aa7.82□□□□□ -1.16
MSH6-211ENST00000606499 PGBD5Q8N414 524 aa7.82□□□□□ -1.16
MSH6-211ENST00000606499 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.82□□□□□ -1.16
MSH6-211ENST00000606499 FAM71DQ8N9W8 422 aa7.82□□□□□ -1.16
MSH6-211ENST00000606499 C12orf50Q8NA57 414 aaPredicted RBP7.82□□□□□ -1.16
MSH6-211ENST00000606499 IL17RCQ8NAC3 791 aa7.82□□□□□ -1.16
MSH6-211ENST00000606499 TSEN2Q8NCE0 465 aaKnown RBP7.82□□□□□ -1.16
MSH6-211ENST00000606499 UCMAQ8WVF2 138 aa7.82□□□□□ -1.16
MSH6-211ENST00000606499 HTR3CQ8WXA8 447 aa7.82□□□□□ -1.16
MSH6-211ENST00000606499 MAML1Q92585 1016 aa7.82□□□□□ -1.16
MSH6-211ENST00000606499 NKD2Q969F2 451 aaPredicted RBP7.82□□□□□ -1.16
MSH6-211ENST00000606499 ZNF599Q96NL3 588 aa7.82□□□□□ -1.16
MSH6-211ENST00000606499 TMEM121Q9BTD3 319 aa7.82□□□□□ -1.16
MSH6-211ENST00000606499 TM6SF2Q9BZW4 377 aa7.82□□□□□ -1.16
MSH6-211ENST00000606499 DDX47Q9H0S4 455 aaKnown RBP7.82□□□□□ -1.16
MSH6-211ENST00000606499 TMEM245Q9H330 911 aa7.82□□□□□ -1.16
MSH6-211ENST00000606499 MFSD1Q9H3U5 465 aa7.82□□□□□ -1.16
MSH6-211ENST00000606499 LMAN1LQ9HAT1 526 aa7.82□□□□□ -1.16
MSH6-211ENST00000606499 NT5MQ9NPB1 228 aa7.82□□□□□ -1.16
MSH6-211ENST00000606499 POLR3BQ9NW08 1133 aaPredicted RBP7.82□□□□□ -1.16
MSH6-211ENST00000606499 THAP10Q9P2Z0 257 aaPredicted RBP7.82□□□□□ -1.16
MSH6-211ENST00000606499 LHX3Q9UBR4 397 aa7.82□□□□□ -1.16
MSH6-211ENST00000606499 PLA2G4CQ9UP65 541 aa7.82□□□□□ -1.16
MSH6-211ENST00000606499 ZNF148Q9UQR1 794 aa7.82□□□□□ -1.16
MSH6-211ENST00000606499 MRPS17Q9Y2R5 130 aaKnown RBP7.82□□□□□ -1.16
MSH6-211ENST00000606499 TTLL3Q9Y4R7 772 aa7.82□□□□□ -1.16
MSH6-211ENST00000606499 STON1Q9Y6Q2 735 aa7.82□□□□□ -1.16
MSH6-211ENST00000606499 TTC24A2A3L6 582 aaPredicted RBP7.81□□□□□ -1.16
MSH6-211ENST00000606499 BCLAF3A2AJT9 711 aaKnown RBP7.81□□□□□ -1.16
MSH6-211ENST00000606499 TMEM221A6NGB7 291 aa7.81□□□□□ -1.16
MSH6-211ENST00000606499 F5H423 210 aaPredicted RBP7.81□□□□□ -1.16
MSH6-211ENST00000606499 M0R296 226 aa7.81□□□□□ -1.16
MSH6-211ENST00000606499 SGK1O00141 431 aa7.81□□□□□ -1.16
MSH6-211ENST00000606499 TIMM44O43615 452 aa7.81□□□□□ -1.16
MSH6-211ENST00000606499 ATP9BO43861 1147 aa7.81□□□□□ -1.16
MSH6-211ENST00000606499 BNIP3LO60238 219 aa7.81□□□□□ -1.16
MSH6-211ENST00000606499 ADAM23O75077 832 aa7.81□□□□□ -1.16
MSH6-211ENST00000606499 ZNF821O75541 412 aaPredicted RBP7.81□□□□□ -1.16
MSH6-211ENST00000606499 JCHAINP01591 159 aa7.81□□□□□ -1.16
MSH6-211ENST00000606499 HLA-DQB2P05538 268 aa7.81□□□□□ -1.16
MSH6-211ENST00000606499 ITGAVP06756 1048 aa7.81□□□□□ -1.16
MSH6-211ENST00000606499 EPHX1P07099 455 aa7.81□□□□□ -1.16
MSH6-211ENST00000606499 DCNP07585 359 aaKnown RBP7.81□□□□□ -1.16
MSH6-211ENST00000606499 ALADP13716 330 aa7.81□□□□□ -1.16
MSH6-211ENST00000606499 COL9A1P20849 921 aa7.81□□□□□ -1.16
MSH6-211ENST00000606499 PTPN3P26045 913 aa7.81□□□□□ -1.16
MSH6-211ENST00000606499 NTSR1P30989 418 aa7.81□□□□□ -1.16
MSH6-211ENST00000606499 NNMTP40261 264 aa7.81□□□□□ -1.16
MSH6-211ENST00000606499 MMP13P45452 471 aa7.81□□□□□ -1.16
MSH6-211ENST00000606499 MAXP61244 160 aa7.81□□□□□ -1.16
MSH6-211ENST00000606499 RHOAP61586 193 aa7.81□□□□□ -1.16
MSH6-211ENST00000606499 ZNF33AQ06730 810 aa7.81□□□□□ -1.16
MSH6-211ENST00000606499 ENPP2Q13822 863 aa7.81□□□□□ -1.16
MSH6-211ENST00000606499 HNRNPDQ14103 355 aaKnown RBP7.81□□□□□ -1.16
MSH6-211ENST00000606499 LRRC32Q14392 662 aa7.81□□□□□ -1.16
MSH6-211ENST00000606499 GAS6Q14393 721 aa7.81□□□□□ -1.16
MSH6-211ENST00000606499 RFTN1Q14699 578 aaPredicted RBP7.81□□□□□ -1.16
MSH6-211ENST00000606499 DLG2Q15700 870 aa7.81□□□□□ -1.16
MSH6-211ENST00000606499 CYP1B1Q16678 543 aa7.81□□□□□ -1.16
MSH6-211ENST00000606499 WHAMMP3Q1A5X7 153 aa7.81□□□□□ -1.16
MSH6-211ENST00000606499 FBXO43Q4G163 708 aa7.81□□□□□ -1.16
MSH6-211ENST00000606499 INO80DQ53TQ3 878 aaPredicted RBP7.81□□□□□ -1.16
MSH6-211ENST00000606499 ATXN7L2Q5T6C5 722 aaPredicted RBP7.81□□□□□ -1.16
MSH6-211ENST00000606499 MARC1Q5VT66 337 aa7.81□□□□□ -1.16
MSH6-211ENST00000606499 CCDC137Q6PK04 289 aaKnown RBP7.81□□□□□ -1.16
MSH6-211ENST00000606499 PRUNE1Q86TP1 453 aa7.81□□□□□ -1.16
MSH6-211ENST00000606499 KLHL7Q8IXQ5 586 aa7.81□□□□□ -1.16
MSH6-211ENST00000606499 TEX26Q8N6G2 289 aa7.81□□□□□ -1.16
MSH6-211ENST00000606499 CNTD1Q8N815 330 aa7.81□□□□□ -1.16
MSH6-211ENST00000606499 GLIS1Q8NBF1 620 aa7.81□□□□□ -1.16
MSH6-211ENST00000606499 TXNDC5Q8NBS9 432 aaKnown RBP7.81□□□□□ -1.16
MSH6-211ENST00000606499 SPATA4Q8NEY3 305 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms