RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 ENDOD1O94919 500 aa18.39■□□□□ 0.53
CHMP2A-208ENST00000601220 CD160O95971 181 aa18.39■□□□□ 0.53
CHMP2A-208ENST00000601220 PRNPP04156 253 aa18.39■□□□□ 0.53
CHMP2A-208ENST00000601220 DGKAP23743 735 aa18.39■□□□□ 0.53
CHMP2A-208ENST00000601220 INSM1Q01101 510 aaPredicted RBP18.39■□□□□ 0.53
CHMP2A-208ENST00000601220 DPCR1Q3MIW9 517 aa18.39■□□□□ 0.53
CHMP2A-208ENST00000601220 TMEM259Q4ZIN3 620 aa18.39■□□□□ 0.53
CHMP2A-208ENST00000601220 C6orf118Q5T5N4 469 aa18.39■□□□□ 0.53
CHMP2A-208ENST00000601220 ACBD5Q5T8D3 534 aaPredicted RBP18.39■□□□□ 0.53
CHMP2A-208ENST00000601220 C22orf39Q6P5X5 142 aa18.39■□□□□ 0.53
CHMP2A-208ENST00000601220 LRRC31Q6UY01 552 aa18.39■□□□□ 0.53
CHMP2A-208ENST00000601220 ERN2Q76MJ5 926 aaKnown RBP18.39■□□□□ 0.53
CHMP2A-208ENST00000601220 ABI3BPQ7Z7G0 1075 aa18.39■□□□□ 0.53
CHMP2A-208ENST00000601220 NOP9Q86U38 636 aaKnown RBP18.39■□□□□ 0.53
CHMP2A-208ENST00000601220 ERICH1Q86X53 443 aa18.39■□□□□ 0.53
CHMP2A-208ENST00000601220 SLC22A18ASQ8N1D0 253 aa18.39■□□□□ 0.53
CHMP2A-208ENST00000601220 OR13H1Q8NG92 308 aa18.39■□□□□ 0.53
CHMP2A-208ENST00000601220 VOPP1Q96AW1 172 aa18.39■□□□□ 0.53
CHMP2A-208ENST00000601220 NXPE2Q96DL1 559 aa18.39■□□□□ 0.53
CHMP2A-208ENST00000601220 MYOCQ99972 504 aa18.39■□□□□ 0.53
CHMP2A-208ENST00000601220 TNKS2Q9H2K2 1166 aa18.39■□□□□ 0.53
CHMP2A-208ENST00000601220 FZD3Q9NPG1 666 aa18.39■□□□□ 0.53
CHMP2A-208ENST00000601220 FARP1Q9Y4F1 1045 aaPredicted RBP18.39■□□□□ 0.53
CHMP2A-208ENST00000601220 LEFTY1O75610 366 aa18.38■□□□□ 0.53
CHMP2A-208ENST00000601220 PRKCSHP14314 528 aaPredicted RBP18.38■□□□□ 0.53
CHMP2A-208ENST00000601220 ITPKBP27987 946 aa18.38■□□□□ 0.53
CHMP2A-208ENST00000601220 OR1E1P30953 314 aa18.38■□□□□ 0.53
CHMP2A-208ENST00000601220 EIF2S3P41091 472 aaKnown RBP18.38■□□□□ 0.53
CHMP2A-208ENST00000601220 ARF5P84085 180 aa18.38■□□□□ 0.53
CHMP2A-208ENST00000601220 RAPGEF1Q13905 1077 aa18.38■□□□□ 0.53
CHMP2A-208ENST00000601220 FGL2Q14314 439 aa18.38■□□□□ 0.53
CHMP2A-208ENST00000601220 TPD52L1Q16890 204 aaPredicted RBP18.38■□□□□ 0.53
CHMP2A-208ENST00000601220 RAB6CQ53S08 254 aa18.38■□□□□ 0.53
CHMP2A-208ENST00000601220 HSP90AA4PQ58FG1 418 aa18.38■□□□□ 0.53
CHMP2A-208ENST00000601220 TAF3Q5VWG9 929 aa18.38■□□□□ 0.53
CHMP2A-208ENST00000601220 SEL1L3Q68CR1 1132 aa18.38■□□□□ 0.53
CHMP2A-208ENST00000601220 ZNF783Q6ZMS7 281 aa18.38■□□□□ 0.53
CHMP2A-208ENST00000601220 GCNT7Q6ZNI0 430 aa18.38■□□□□ 0.53
CHMP2A-208ENST00000601220 ARCQ7LC44 396 aa18.38■□□□□ 0.53
CHMP2A-208ENST00000601220 FAM114A1Q8IWE2 563 aa18.38■□□□□ 0.53
CHMP2A-208ENST00000601220 DCBLD1Q8N8Z6 715 aa18.38■□□□□ 0.53
CHMP2A-208ENST00000601220 CCDC114Q96M63 670 aa18.38■□□□□ 0.53
CHMP2A-208ENST00000601220 CFAP57Q96MR6 1250 aa18.38■□□□□ 0.53
CHMP2A-208ENST00000601220 RAB6CQ9H0N0 254 aa18.38■□□□□ 0.53
CHMP2A-208ENST00000601220 CLSTN2Q9H4D0 955 aa18.38■□□□□ 0.53
CHMP2A-208ENST00000601220 GPR27Q9NS67 375 aa18.38■□□□□ 0.53
CHMP2A-208ENST00000601220 IL36AQ9UHA7 158 aa18.38■□□□□ 0.53
CHMP2A-208ENST00000601220 PAXBP1Q9Y5B6 917 aa18.38■□□□□ 0.53
CHMP2A-208ENST00000601220 SRGAP2O75044 1071 aa18.37■□□□□ 0.53
CHMP2A-208ENST00000601220 LSM8O95777 96 aaKnown RBP18.37■□□□□ 0.53
CHMP2A-208ENST00000601220 UCHL3P15374 230 aa18.37■□□□□ 0.53
CHMP2A-208ENST00000601220 HNRNPA2B1P22626 353 aaKnown RBP18.37■□□□□ 0.53
CHMP2A-208ENST00000601220 ERCC5P28715 1186 aaPredicted RBP18.37■□□□□ 0.53
CHMP2A-208ENST00000601220 SERPINH1P50454 418 aaKnown RBP18.37■□□□□ 0.53
CHMP2A-208ENST00000601220 CLDN2P57739 230 aa18.37■□□□□ 0.53
CHMP2A-208ENST00000601220 NOMO3P69849 1222 aa18.37■□□□□ 0.53
CHMP2A-208ENST00000601220 SLC20A2Q08357 652 aa18.37■□□□□ 0.53
CHMP2A-208ENST00000601220 CCDC15Q0P6D6 951 aa18.37■□□□□ 0.53
CHMP2A-208ENST00000601220 OR4C6Q8NH72 309 aa18.37■□□□□ 0.53
CHMP2A-208ENST00000601220 GRIN3AQ8TCU5 1115 aa18.37■□□□□ 0.53
CHMP2A-208ENST00000601220 CPA5Q8WXQ8 436 aa18.37■□□□□ 0.53
CHMP2A-208ENST00000601220 BMFQ96LC9 184 aa18.37■□□□□ 0.53
CHMP2A-208ENST00000601220 STK33Q9BYT3 514 aa18.37■□□□□ 0.53
CHMP2A-208ENST00000601220 ZYG11BQ9C0D3 744 aa18.37■□□□□ 0.53
CHMP2A-208ENST00000601220 CEP44Q9C0F1 390 aa18.37■□□□□ 0.53
CHMP2A-208ENST00000601220 PDCL3Q9H2J4 239 aa18.37■□□□□ 0.53
CHMP2A-208ENST00000601220 PPARGC1AQ9UBK2 798 aaKnown RBP18.37■□□□□ 0.53
CHMP2A-208ENST00000601220 ACTL7AQ9Y615 435 aa18.37■□□□□ 0.53
CHMP2A-208ENST00000601220 HS3ST3A1Q9Y663 406 aa18.37■□□□□ 0.53
CHMP2A-208ENST00000601220 DOCK9Q9BZ29 2069 aa18.37■□□□□ 0.53
CHMP2A-208ENST00000601220 LY6G6EA0A0G2JKS1 128 aa18.36■□□□□ 0.53
CHMP2A-208ENST00000601220 GOLGA8SH3BPF8 625 aa18.36■□□□□ 0.53
CHMP2A-208ENST00000601220 PIAS2O75928 621 aa18.36■□□□□ 0.53
CHMP2A-208ENST00000601220 MMEP08473 750 aa18.36■□□□□ 0.53
CHMP2A-208ENST00000601220 AKT2P31751 481 aa18.36■□□□□ 0.53
CHMP2A-208ENST00000601220 SEMG2Q02383 582 aa18.36■□□□□ 0.53
CHMP2A-208ENST00000601220 GNA12Q03113 381 aa18.36■□□□□ 0.53
CHMP2A-208ENST00000601220 MANEALQ5VSG8 457 aa18.36■□□□□ 0.53
CHMP2A-208ENST00000601220 FAM131BQ86XD5 332 aa18.36■□□□□ 0.53
CHMP2A-208ENST00000601220 EPS8L1Q8TE68 723 aa18.36■□□□□ 0.53
CHMP2A-208ENST00000601220 DCBLD2Q96PD2 775 aa18.36■□□□□ 0.53
CHMP2A-208ENST00000601220 SPON2Q9BUD6 331 aa18.36■□□□□ 0.53
CHMP2A-208ENST00000601220 SAMSN1Q9NSI8 373 aaKnown RBP18.36■□□□□ 0.53
CHMP2A-208ENST00000601220 FADS3Q9Y5Q0 445 aa18.36■□□□□ 0.53
CHMP2A-208ENST00000601220 U3KQA8 63 aa18.36■□□□□ 0.53
CHMP2A-208ENST00000601220 F8VZ95 297 aa18.35■□□□□ 0.53
CHMP2A-208ENST00000601220 RAD51BO15315 384 aa18.35■□□□□ 0.53
CHMP2A-208ENST00000601220 PCDH8O95206 1070 aa18.35■□□□□ 0.53
CHMP2A-208ENST00000601220 ADRB3P13945 408 aa18.35■□□□□ 0.53
CHMP2A-208ENST00000601220 ITGB7P26010 798 aa18.35■□□□□ 0.53
CHMP2A-208ENST00000601220 E2F1Q01094 437 aa18.35■□□□□ 0.53
CHMP2A-208ENST00000601220 NRG1Q02297 640 aaPredicted RBP18.35■□□□□ 0.53
CHMP2A-208ENST00000601220 CARD16Q5EG05 197 aa18.35■□□□□ 0.53
CHMP2A-208ENST00000601220 RETSATQ6NUM9 610 aa18.35■□□□□ 0.53
CHMP2A-208ENST00000601220 Q6ZSR6 202 aa18.35■□□□□ 0.53
CHMP2A-208ENST00000601220 PCDH20Q8N6Y1 951 aaKnown RBP18.35■□□□□ 0.53
CHMP2A-208ENST00000601220 EMC1Q8N766 993 aa18.35■□□□□ 0.53
CHMP2A-208ENST00000601220 SNIP1Q8TAD8 396 aaKnown RBP18.35■□□□□ 0.53
CHMP2A-208ENST00000601220 IFT43Q96FT9 208 aa18.35■□□□□ 0.53
CHMP2A-208ENST00000601220 HEPHQ9BQS7 1158 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms