RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 PCDH20Q8N6Y1 951 aaKnown RBP8.97□□□□□ -0.97
SSBP4-208ENST00000600628 CEP76Q8TAP6 659 aa8.97□□□□□ -0.97
SSBP4-208ENST00000600628 NUP85Q9BW27 656 aa8.97□□□□□ -0.97
SSBP4-208ENST00000600628 GPR174Q9BXC1 333 aa8.97□□□□□ -0.97
SSBP4-208ENST00000600628 KDM4CQ9H3R0 1056 aa8.97□□□□□ -0.97
SSBP4-208ENST00000600628 NHEJ1Q9H9Q4 299 aaPredicted RBP8.97□□□□□ -0.97
SSBP4-208ENST00000600628 EBF2Q9HAK2 575 aa8.97□□□□□ -0.97
SSBP4-208ENST00000600628 ATP13A1Q9HD20 1204 aa8.97□□□□□ -0.97
SSBP4-208ENST00000600628 CWC15Q9P013 229 aaKnown RBP8.97□□□□□ -0.97
SSBP4-208ENST00000600628 SLC25A13Q9UJS0 675 aa8.97□□□□□ -0.97
SSBP4-208ENST00000600628 INTUQ9ULD6 942 aa8.97□□□□□ -0.97
SSBP4-208ENST00000600628 MFHAS1Q9Y4C4 1052 aa8.97□□□□□ -0.97
SSBP4-208ENST00000600628 SLCO1B1Q9Y6L6 691 aa8.97□□□□□ -0.97
SSBP4-208ENST00000600628 BPTFQ12830 3046 aa8.97□□□□□ -0.97
SSBP4-208ENST00000600628 ANKRD36A6QL64 1941 aa8.97□□□□□ -0.97
SSBP4-208ENST00000600628 LRRK1Q38SD2 2015 aa8.97□□□□□ -0.97
SSBP4-208ENST00000600628 ZZEF1O43149 2961 aa8.96□□□□□ -0.97
SSBP4-208ENST00000600628 ZSCAN5CA6NGD5 496 aaPredicted RBP8.96□□□□□ -0.98
SSBP4-208ENST00000600628 UPK3BL1B0FP48 263 aa8.96□□□□□ -0.98
SSBP4-208ENST00000600628 RASA4BC9J798 803 aa8.96□□□□□ -0.98
SSBP4-208ENST00000600628 AKR1B15C9JRZ8 316 aaPredicted RBP8.96□□□□□ -0.98
SSBP4-208ENST00000600628 UPK3BL2E5RIL1 263 aa8.96□□□□□ -0.98
SSBP4-208ENST00000600628 SLC7A4O43246 635 aa8.96□□□□□ -0.98
SSBP4-208ENST00000600628 RASA4O43374 803 aa8.96□□□□□ -0.98
SSBP4-208ENST00000600628 PLRG1O43660 514 aaKnown RBP8.96□□□□□ -0.98
SSBP4-208ENST00000600628 PRPSAP2O60256 369 aa8.96□□□□□ -0.98
SSBP4-208ENST00000600628 RNF8O76064 485 aa8.96□□□□□ -0.98
SSBP4-208ENST00000600628 PROSCO94903 275 aa8.96□□□□□ -0.98
SSBP4-208ENST00000600628 PEX11BO96011 259 aa8.96□□□□□ -0.98
SSBP4-208ENST00000600628 GSRP00390 522 aa8.96□□□□□ -0.98
SSBP4-208ENST00000600628 DNTTP04053 509 aa8.96□□□□□ -0.98
SSBP4-208ENST00000600628 H2AFZP0C0S5 128 aa8.96□□□□□ -0.98
SSBP4-208ENST00000600628 RARAP10276 462 aa8.96□□□□□ -0.98
SSBP4-208ENST00000600628 ACADMP11310 421 aa8.96□□□□□ -0.98
SSBP4-208ENST00000600628 NNMTP40261 264 aa8.96□□□□□ -0.98
SSBP4-208ENST00000600628 NUMBP49757 651 aa8.96□□□□□ -0.98
SSBP4-208ENST00000600628 CCR5P51681 352 aa8.96□□□□□ -0.98
SSBP4-208ENST00000600628 ADPRHP54922 357 aa8.96□□□□□ -0.98
SSBP4-208ENST00000600628 GEMIN4P57678 1058 aaKnown RBP8.96□□□□□ -0.98
SSBP4-208ENST00000600628 POLD3Q15054 466 aaPredicted RBP8.96□□□□□ -0.98
SSBP4-208ENST00000600628 DUOXA1Q1HG43 343 aa8.96□□□□□ -0.98
SSBP4-208ENST00000600628 TTC31Q49AM3 519 aaPredicted RBP8.96□□□□□ -0.98
SSBP4-208ENST00000600628 TRIM61Q5EBN2 209 aa8.96□□□□□ -0.98
SSBP4-208ENST00000600628 PIP5KL1Q5T9C9 394 aa8.96□□□□□ -0.98
SSBP4-208ENST00000600628 DCAF12L1Q5VU92 463 aa8.96□□□□□ -0.98
SSBP4-208ENST00000600628 IL31Q6EBC2 164 aa8.96□□□□□ -0.98
SSBP4-208ENST00000600628 RETSATQ6NUM9 610 aa8.96□□□□□ -0.98
SSBP4-208ENST00000600628 SCYL2Q6P3W7 929 aa8.96□□□□□ -0.98
SSBP4-208ENST00000600628 LINGO4Q6UY18 593 aa8.96□□□□□ -0.98
SSBP4-208ENST00000600628 DBX2Q6ZNG2 339 aa8.96□□□□□ -0.98
SSBP4-208ENST00000600628 DPY19L3Q6ZPD9 716 aa8.96□□□□□ -0.98
SSBP4-208ENST00000600628 RFX8Q6ZV50 586 aa8.96□□□□□ -0.98
SSBP4-208ENST00000600628 H2AFVQ71UI9 128 aa8.96□□□□□ -0.98
SSBP4-208ENST00000600628 RABEPKQ7Z6M1 372 aa8.96□□□□□ -0.98
SSBP4-208ENST00000600628 CPNE8Q86YQ8 564 aa8.96□□□□□ -0.98
SSBP4-208ENST00000600628 TMEM139Q8IV31 216 aa8.96□□□□□ -0.98
SSBP4-208ENST00000600628 NPWQ8N729 165 aa8.96□□□□□ -0.98
SSBP4-208ENST00000600628 OR2T34Q8NGX1 318 aa8.96□□□□□ -0.98
SSBP4-208ENST00000600628 PIP4K2CQ8TBX8 421 aa8.96□□□□□ -0.98
SSBP4-208ENST00000600628 ZNF564Q8TBZ8 553 aaPredicted RBP8.96□□□□□ -0.98
SSBP4-208ENST00000600628 CASKIN2Q8WXE0 1202 aa8.96□□□□□ -0.98
SSBP4-208ENST00000600628 OR8D1Q8WZ84 308 aa8.96□□□□□ -0.98
SSBP4-208ENST00000600628 SPOCK2Q92563 424 aa8.96□□□□□ -0.98
SSBP4-208ENST00000600628 BIRC7Q96CA5 298 aa8.96□□□□□ -0.98
SSBP4-208ENST00000600628 FAF2Q96CS3 445 aa8.96□□□□□ -0.98
SSBP4-208ENST00000600628 HMCESQ96FZ2 354 aa8.96□□□□□ -0.98
SSBP4-208ENST00000600628 BTBD6Q96KE9 485 aa8.96□□□□□ -0.98
SSBP4-208ENST00000600628 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.96□□□□□ -0.98
SSBP4-208ENST00000600628 EDEM2Q9BV94 578 aa8.96□□□□□ -0.98
SSBP4-208ENST00000600628 HDAC8Q9BY41 377 aa8.96□□□□□ -0.98
SSBP4-208ENST00000600628 BTBD1Q9H0C5 482 aa8.96□□□□□ -0.98
SSBP4-208ENST00000600628 NEUROG2Q9H2A3 272 aa8.96□□□□□ -0.98
SSBP4-208ENST00000600628 CATSPERBQ9H7T0 1116 aa8.96□□□□□ -0.98
SSBP4-208ENST00000600628 FBXL12Q9NXK8 326 aa8.96□□□□□ -0.98
SSBP4-208ENST00000600628 DONSONQ9NYP3 566 aa8.96□□□□□ -0.98
SSBP4-208ENST00000600628 RCOR3Q9P2K3 495 aaPredicted RBP8.96□□□□□ -0.98
SSBP4-208ENST00000600628 PCSK1NQ9UHG2 260 aa8.96□□□□□ -0.98
SSBP4-208ENST00000600628 IP6K2Q9UHH9 426 aa8.96□□□□□ -0.98
SSBP4-208ENST00000600628 DNAI1Q9UI46 699 aa8.96□□□□□ -0.98
SSBP4-208ENST00000600628 ANAPC7Q9UJX3 599 aa8.96□□□□□ -0.98
SSBP4-208ENST00000600628 TPX2Q9ULW0 747 aaKnown RBP8.96□□□□□ -0.98
SSBP4-208ENST00000600628 SLC6A14Q9UN76 642 aa8.96□□□□□ -0.98
SSBP4-208ENST00000600628 ACTL7AQ9Y615 435 aa8.96□□□□□ -0.98
SSBP4-208ENST00000600628 AKAP13Q12802 2813 aa8.96□□□□□ -0.98
SSBP4-208ENST00000600628 CHD8Q9HCK8 2581 aa8.96□□□□□ -0.98
SSBP4-208ENST00000600628 DMXL2Q8TDJ6 3036 aa8.96□□□□□ -0.98
SSBP4-208ENST00000600628 SHROOM3Q8TF72 1996 aa8.95□□□□□ -0.98
SSBP4-208ENST00000600628 A0A1W2PP55 124 aa8.95□□□□□ -0.98
SSBP4-208ENST00000600628 MED19A0JLT2 244 aaPredicted RBP8.95□□□□□ -0.98
SSBP4-208ENST00000600628 C4orf47A7E2U8 309 aa8.95□□□□□ -0.98
SSBP4-208ENST00000600628 ZNF487B1APH4 448 aa8.95□□□□□ -0.98
SSBP4-208ENST00000600628 MYO1FO00160 1098 aa8.95□□□□□ -0.98
SSBP4-208ENST00000600628 CBX4O00257 560 aa8.95□□□□□ -0.98
SSBP4-208ENST00000600628 SPINT1O43278 529 aa8.95□□□□□ -0.98
SSBP4-208ENST00000600628 CREB3O43889 395 aa8.95□□□□□ -0.98
SSBP4-208ENST00000600628 PRAMEF11O60813 436 aa8.95□□□□□ -0.98
SSBP4-208ENST00000600628 RNASEH1O60930 286 aaKnown RBP8.95□□□□□ -0.98
SSBP4-208ENST00000600628 ERCC2P18074 760 aa8.95□□□□□ -0.98
SSBP4-208ENST00000600628 CD27P26842 260 aa8.95□□□□□ -0.98
SSBP4-208ENST00000600628 CHRNA3P32297 505 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms