RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 CEP44Q9C0F1 390 aa15.51■□□□□ 0.07
LIG1-219ENST00000600055 NEUROG2Q9H2A3 272 aa15.51■□□□□ 0.07
LIG1-219ENST00000600055 SEMA4GQ9NTN9 838 aa15.51■□□□□ 0.07
LIG1-219ENST00000600055 FBXL12Q9NXK8 326 aa15.51■□□□□ 0.07
LIG1-219ENST00000600055 LCMT1Q9UIC8 334 aa15.51■□□□□ 0.07
LIG1-219ENST00000600055 PPM1HQ9ULR3 514 aa15.51■□□□□ 0.07
LIG1-219ENST00000600055 DFFAO00273 331 aa15.5■□□□□ 0.07
LIG1-219ENST00000600055 RNASEH2AO75792 299 aaKnown RBP15.5■□□□□ 0.07
LIG1-219ENST00000600055 ADH1BP00325 375 aa15.5■□□□□ 0.07
LIG1-219ENST00000600055 CHRNA3P32297 505 aa15.5■□□□□ 0.07
LIG1-219ENST00000600055 DRD3P35462 400 aa15.5■□□□□ 0.07
LIG1-219ENST00000600055 DPYSL3Q14195 570 aa15.5■□□□□ 0.07
LIG1-219ENST00000600055 SF3A2Q15428 464 aaKnown RBP15.5■□□□□ 0.07
LIG1-219ENST00000600055 CARD16Q5EG05 197 aa15.5■□□□□ 0.07
LIG1-219ENST00000600055 SPDYCQ5MJ68 293 aa15.5■□□□□ 0.07
LIG1-219ENST00000600055 PLA2G2CQ5R387 149 aa15.5■□□□□ 0.07
LIG1-219ENST00000600055 USP30Q70CQ3 517 aa15.5■□□□□ 0.07
LIG1-219ENST00000600055 HDDC3Q8N4P3 179 aa15.5■□□□□ 0.07
LIG1-219ENST00000600055 PCDH20Q8N6Y1 951 aaKnown RBP15.5■□□□□ 0.07
LIG1-219ENST00000600055 KCTD6Q8NC69 237 aa15.5■□□□□ 0.07
LIG1-219ENST00000600055 PIP4K2CQ8TBX8 421 aa15.5■□□□□ 0.07
LIG1-219ENST00000600055 ZNF419Q96HQ0 510 aaPredicted RBP15.5■□□□□ 0.07
LIG1-219ENST00000600055 OMDQ99983 421 aa15.5■□□□□ 0.07
LIG1-219ENST00000600055 BTBD1Q9H0C5 482 aa15.5■□□□□ 0.07
LIG1-219ENST00000600055 GOLPH3Q9H4A6 298 aa15.5■□□□□ 0.07
LIG1-219ENST00000600055 C6orf106Q9H6K1 298 aaPredicted RBP15.5■□□□□ 0.07
LIG1-219ENST00000600055 TMEM74BQ9NUR3 256 aa15.5■□□□□ 0.07
LIG1-219ENST00000600055 DONSONQ9NYP3 566 aa15.5■□□□□ 0.07
LIG1-219ENST00000600055 SALL4Q9UJQ4 1053 aa15.5■□□□□ 0.07
LIG1-219ENST00000600055 SCML1Q9UN30 329 aa15.5■□□□□ 0.07
LIG1-219ENST00000600055 NCKAP1Q9Y2A7 1128 aa15.5■□□□□ 0.07
LIG1-219ENST00000600055 PCDHGA5Q9Y5G8 931 aa15.5■□□□□ 0.07
LIG1-219ENST00000600055 PLXND1Q9Y4D7 1925 aa15.5■□□□□ 0.07
LIG1-219ENST00000600055 FRYLO94915 3013 aa15.5■□□□□ 0.07
LIG1-219ENST00000600055 CXorf51AA0A1B0GTR3 108 aa15.49■□□□□ 0.07
LIG1-219ENST00000600055 ARHGAP42A6NI28 874 aa15.49■□□□□ 0.07
LIG1-219ENST00000600055 PATE3B3GLJ2 98 aa15.49■□□□□ 0.07
LIG1-219ENST00000600055 ALOX15BO15296 676 aa15.49■□□□□ 0.07
LIG1-219ENST00000600055 BUB1BO60566 1050 aaPredicted RBP15.49■□□□□ 0.07
LIG1-219ENST00000600055 TMCC1O94876 653 aa15.49■□□□□ 0.07
LIG1-219ENST00000600055 KRT7P08729 469 aa15.49■□□□□ 0.07
LIG1-219ENST00000600055 TNNT1P13805 278 aa15.49■□□□□ 0.07
LIG1-219ENST00000600055 C5AR1P21730 350 aa15.49■□□□□ 0.07
LIG1-219ENST00000600055 COMTP21964 271 aa15.49■□□□□ 0.07
LIG1-219ENST00000600055 MAOBP27338 520 aa15.49■□□□□ 0.07
LIG1-219ENST00000600055 GKP32189 559 aa15.49■□□□□ 0.07
LIG1-219ENST00000600055 RECQLP46063 649 aaPredicted RBP15.49■□□□□ 0.07
LIG1-219ENST00000600055 GEMIN4P57678 1058 aaKnown RBP15.49■□□□□ 0.07
LIG1-219ENST00000600055 CYTH1Q15438 398 aa15.49■□□□□ 0.07
LIG1-219ENST00000600055 ARSIQ5FYB1 569 aa15.49■□□□□ 0.07
LIG1-219ENST00000600055 ZFYVE27Q5T4F4 411 aa15.49■□□□□ 0.07
LIG1-219ENST00000600055 ATXN7L2Q5T6C5 722 aaPredicted RBP15.49■□□□□ 0.07
LIG1-219ENST00000600055 TCEAL6Q6IPX3 200 aa15.49■□□□□ 0.07
LIG1-219ENST00000600055 TMCO3Q6UWJ1 677 aa15.49■□□□□ 0.07
LIG1-219ENST00000600055 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.49■□□□□ 0.07
LIG1-219ENST00000600055 DSG4Q86SJ6 1040 aa15.49■□□□□ 0.07
LIG1-219ENST00000600055 OR6K2Q8NGY2 324 aa15.49■□□□□ 0.07
LIG1-219ENST00000600055 GRIN3AQ8TCU5 1115 aa15.49■□□□□ 0.07
LIG1-219ENST00000600055 RAPGEF5Q92565 580 aa15.49■□□□□ 0.07
LIG1-219ENST00000600055 TCEAL3Q969E4 200 aa15.49■□□□□ 0.07
LIG1-219ENST00000600055 ISG20Q96AZ6 181 aaKnown RBP15.49■□□□□ 0.07
LIG1-219ENST00000600055 ARRDC3Q96B67 414 aa15.49■□□□□ 0.07
LIG1-219ENST00000600055 CCDC114Q96M63 670 aa15.49■□□□□ 0.07
LIG1-219ENST00000600055 CALN1Q9BXU9 219 aa15.49■□□□□ 0.07
LIG1-219ENST00000600055 PDFQ9HBH1 243 aa15.49■□□□□ 0.07
LIG1-219ENST00000600055 FARP1Q9Y4F1 1045 aaPredicted RBP15.49■□□□□ 0.07
LIG1-219ENST00000600055 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.49■□□□□ 0.07
LIG1-219ENST00000600055 DUSP10Q9Y6W6 482 aa15.49■□□□□ 0.07
LIG1-219ENST00000600055 THADAQ6YHU6 1953 aa15.48■□□□□ 0.07
LIG1-219ENST00000600055 ZSCAN5CA6NGD5 496 aaPredicted RBP15.48■□□□□ 0.07
LIG1-219ENST00000600055 FAM47DPA6NHR8 397 aa15.48■□□□□ 0.07
LIG1-219ENST00000600055 METTL12A8MUP2 240 aa15.48■□□□□ 0.07
LIG1-219ENST00000600055 C1QTNF3-AMACRE9PGA6 284 aa15.48■□□□□ 0.07
LIG1-219ENST00000600055 PRAMEF11O60813 436 aa15.48■□□□□ 0.07
LIG1-219ENST00000600055 LRP3O75074 770 aa15.48■□□□□ 0.07
LIG1-219ENST00000600055 LEFTY1O75610 366 aa15.48■□□□□ 0.07
LIG1-219ENST00000600055 SEMA4FO95754 770 aa15.48■□□□□ 0.07
LIG1-219ENST00000600055 CCNHP51946 323 aaPredicted RBP15.48■□□□□ 0.07
LIG1-219ENST00000600055 HADHBP55084 474 aaKnown RBP15.48■□□□□ 0.07
LIG1-219ENST00000600055 CNTN1Q12860 1018 aa15.48■□□□□ 0.07
LIG1-219ENST00000600055 PDK2Q15119 407 aa15.48■□□□□ 0.07
LIG1-219ENST00000600055 CSRP2Q16527 193 aa15.48■□□□□ 0.07
LIG1-219ENST00000600055 ANKRD20A8PQ5CZ79 823 aa15.48■□□□□ 0.07
LIG1-219ENST00000600055 DCAF12L1Q5VU92 463 aa15.48■□□□□ 0.07
LIG1-219ENST00000600055 FAM46CQ5VWP2 391 aa15.48■□□□□ 0.07
LIG1-219ENST00000600055 RYBPQ8N488 228 aaPredicted RBP15.48■□□□□ 0.07
LIG1-219ENST00000600055 LZTR1Q8N653 840 aa15.48■□□□□ 0.07
LIG1-219ENST00000600055 TMIEQ8NEW7 156 aa15.48■□□□□ 0.07
LIG1-219ENST00000600055 PCDH19Q8TAB3 1148 aa15.48■□□□□ 0.07
LIG1-219ENST00000600055 HEPHQ9BQS7 1158 aa15.48■□□□□ 0.07
LIG1-219ENST00000600055 DESI2Q9BSY9 194 aa15.48■□□□□ 0.07
LIG1-219ENST00000600055 LACRTQ9GZZ8 138 aa15.48■□□□□ 0.07
LIG1-219ENST00000600055 SGK2Q9HBY8 427 aa15.48■□□□□ 0.07
LIG1-219ENST00000600055 LUC7LQ9NQ29 371 aaKnown RBP15.48■□□□□ 0.07
LIG1-219ENST00000600055 HECAQ9UBI9 543 aaPredicted RBP15.48■□□□□ 0.07
LIG1-219ENST00000600055 UBA2Q9UBT2 640 aaPredicted RBP15.48■□□□□ 0.07
LIG1-219ENST00000600055 IL36AQ9UHA7 158 aa15.48■□□□□ 0.07
LIG1-219ENST00000600055 PILRBQ9UKJ0 227 aa15.48■□□□□ 0.07
LIG1-219ENST00000600055 WASF2Q9Y6W5 498 aa15.48■□□□□ 0.07
LIG1-219ENST00000600055 OTOGLQ3ZCN5 2332 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms