RNA–Protein interactions for RNA: ENST00000599563.5

SH2D3A-208, Transcript of SH2 domain containing 3A, humanhuman

TSL 3

Gene SH2D3A, Length 845 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-208ENST00000599563 KCNA4P22459 653 aa13.12□□□□□ -0.31
SH2D3A-208ENST00000599563 SSR1P43307 286 aaKnown RBP13.12□□□□□ -0.31
SH2D3A-208ENST00000599563 MAPK8P45983 427 aa13.12□□□□□ -0.31
SH2D3A-208ENST00000599563 SLC14A1Q13336 389 aa13.12□□□□□ -0.31
SH2D3A-208ENST00000599563 HNRNPDQ14103 355 aaKnown RBP13.12□□□□□ -0.31
SH2D3A-208ENST00000599563 CST6Q15828 149 aa13.12□□□□□ -0.31
SH2D3A-208ENST00000599563 UAP1L1Q3KQV9 507 aa13.12□□□□□ -0.31
SH2D3A-208ENST00000599563 KCNT1Q5JUK3 1230 aa13.12□□□□□ -0.31
SH2D3A-208ENST00000599563 ARTNQ5T4W7 220 aa13.12□□□□□ -0.31
SH2D3A-208ENST00000599563 C6orf118Q5T5N4 469 aa13.12□□□□□ -0.31
SH2D3A-208ENST00000599563 C9orf64Q5T6V5 341 aa13.12□□□□□ -0.31
SH2D3A-208ENST00000599563 CXorf57Q6NSI4 855 aaKnown RBP13.12□□□□□ -0.31
SH2D3A-208ENST00000599563 IL27RAQ6UWB1 636 aa13.12□□□□□ -0.31
SH2D3A-208ENST00000599563 NT5DC3Q86UY8 548 aa13.12□□□□□ -0.31
SH2D3A-208ENST00000599563 FAM124AQ86V42 546 aa13.12□□□□□ -0.31
SH2D3A-208ENST00000599563 APCDD1Q8J025 514 aa13.12□□□□□ -0.31
SH2D3A-208ENST00000599563 PYROXD2Q8N2H3 581 aa13.12□□□□□ -0.31
SH2D3A-208ENST00000599563 RNF10Q8N5U6 811 aaKnown RBP13.12□□□□□ -0.31
SH2D3A-208ENST00000599563 GANCQ8TET4 914 aa13.12□□□□□ -0.31
SH2D3A-208ENST00000599563 KRT35Q92764 455 aa13.12□□□□□ -0.31
SH2D3A-208ENST00000599563 IGSF8Q969P0 613 aa13.12□□□□□ -0.31
SH2D3A-208ENST00000599563 CCDC114Q96M63 670 aa13.12□□□□□ -0.31
SH2D3A-208ENST00000599563 GTPBP2Q9BX10 602 aaKnown RBP13.12□□□□□ -0.31
SH2D3A-208ENST00000599563 MUC3BQ9H195 1237 aa13.12□□□□□ -0.31
SH2D3A-208ENST00000599563 VPS28Q9UK41 221 aa13.12□□□□□ -0.31
SH2D3A-208ENST00000599563 FZD10Q9ULW2 581 aa13.12□□□□□ -0.31
SH2D3A-208ENST00000599563 ANKRD36A6QL64 1941 aa13.11□□□□□ -0.31
SH2D3A-208ENST00000599563 LRRC72A6NJI9 287 aa13.11□□□□□ -0.31
SH2D3A-208ENST00000599563 DRGXA6NNA5 263 aa13.11□□□□□ -0.31
SH2D3A-208ENST00000599563 TTC34A8MYJ7 566 aa13.11□□□□□ -0.31
SH2D3A-208ENST00000599563 FANCGO15287 622 aa13.11□□□□□ -0.31
SH2D3A-208ENST00000599563 ALOX15BO15296 676 aa13.11□□□□□ -0.31
SH2D3A-208ENST00000599563 SPOPO43791 374 aa13.11□□□□□ -0.31
SH2D3A-208ENST00000599563 RARAP10276 462 aa13.11□□□□□ -0.31
SH2D3A-208ENST00000599563 DESP17661 470 aa13.11□□□□□ -0.31
SH2D3A-208ENST00000599563 C5AR1P21730 350 aa13.11□□□□□ -0.31
SH2D3A-208ENST00000599563 PCK1P35558 622 aa13.11□□□□□ -0.31
SH2D3A-208ENST00000599563 NOVA1P51513 510 aaKnown RBP13.11□□□□□ -0.31
SH2D3A-208ENST00000599563 IRAK1P51617 712 aa13.11□□□□□ -0.31
SH2D3A-208ENST00000599563 AFF3P51826 1226 aaKnown RBP13.11□□□□□ -0.31
SH2D3A-208ENST00000599563 ACAP1Q15027 740 aa13.11□□□□□ -0.31
SH2D3A-208ENST00000599563 TEAD4Q15561 434 aa13.11□□□□□ -0.31
SH2D3A-208ENST00000599563 FAM46CQ5VWP2 391 aa13.11□□□□□ -0.31
SH2D3A-208ENST00000599563 ZNF783Q6ZMS7 281 aa13.11□□□□□ -0.31
SH2D3A-208ENST00000599563 C14orf80Q86SX3 495 aa13.11□□□□□ -0.31
SH2D3A-208ENST00000599563 CIR1Q86X95 450 aaPredicted RBP13.11□□□□□ -0.31
SH2D3A-208ENST00000599563 MINDY1Q8N5J2 469 aa13.11□□□□□ -0.31
SH2D3A-208ENST00000599563 OR8D1Q8WZ84 308 aa13.11□□□□□ -0.31
SH2D3A-208ENST00000599563 NTAN1Q96AB6 310 aa13.11□□□□□ -0.31
SH2D3A-208ENST00000599563 RPL10LQ96L21 214 aaKnown RBP13.11□□□□□ -0.31
SH2D3A-208ENST00000599563 KCTD15Q96SI1 283 aaPredicted RBP13.11□□□□□ -0.31
SH2D3A-208ENST00000599563 OMDQ99983 421 aa13.11□□□□□ -0.31
SH2D3A-208ENST00000599563 MIR1-1HGQ9H1L0 117 aa13.11□□□□□ -0.31
SH2D3A-208ENST00000599563 DNAAF2Q9NVR5 837 aaKnown RBP13.11□□□□□ -0.31
SH2D3A-208ENST00000599563 FBXL12Q9NXK8 326 aa13.11□□□□□ -0.31
SH2D3A-208ENST00000599563 SLCO3A1Q9UIG8 710 aa13.11□□□□□ -0.31
SH2D3A-208ENST00000599563 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.11□□□□□ -0.31
SH2D3A-208ENST00000599563 FARP1Q9Y4F1 1045 aaPredicted RBP13.11□□□□□ -0.31
SH2D3A-208ENST00000599563 PCNX2A6NKB5 2137 aa13.1□□□□□ -0.31
SH2D3A-208ENST00000599563 IGLV3-10A0A075B6K4 115 aa13.1□□□□□ -0.31
SH2D3A-208ENST00000599563 FAM72CH0Y354 149 aa13.1□□□□□ -0.31
SH2D3A-208ENST00000599563 ATP9BO43861 1147 aa13.1□□□□□ -0.31
SH2D3A-208ENST00000599563 PRPSAP2O60256 369 aa13.1□□□□□ -0.31
SH2D3A-208ENST00000599563 CER1O95813 267 aa13.1□□□□□ -0.31
SH2D3A-208ENST00000599563 RHOCP08134 193 aa13.1□□□□□ -0.31
SH2D3A-208ENST00000599563 CD27P26842 260 aa13.1□□□□□ -0.31
SH2D3A-208ENST00000599563 MZF1P28698 734 aaPredicted RBP13.1□□□□□ -0.31
SH2D3A-208ENST00000599563 SLC8A1P32418 973 aa13.1□□□□□ -0.31
SH2D3A-208ENST00000599563 ACSL1P33121 698 aa13.1□□□□□ -0.31
SH2D3A-208ENST00000599563 ADRA1BP35368 520 aa13.1□□□□□ -0.31
SH2D3A-208ENST00000599563 ETFBP38117 255 aa13.1□□□□□ -0.31
SH2D3A-208ENST00000599563 CTSOP43234 321 aaPredicted RBP13.1□□□□□ -0.31
SH2D3A-208ENST00000599563 DNA2P51530 1060 aa13.1□□□□□ -0.31
SH2D3A-208ENST00000599563 CLCN6P51797 869 aa13.1□□□□□ -0.31
SH2D3A-208ENST00000599563 NRG1Q02297 640 aaPredicted RBP13.1□□□□□ -0.31
SH2D3A-208ENST00000599563 CCDC15Q0P6D6 951 aa13.1□□□□□ -0.31
SH2D3A-208ENST00000599563 SEMA3BQ13214 749 aa13.1□□□□□ -0.31
SH2D3A-208ENST00000599563 IFI16Q16666 785 aaKnown RBP13.1□□□□□ -0.31
SH2D3A-208ENST00000599563 ZNF569Q5MCW4 686 aa13.1□□□□□ -0.31
SH2D3A-208ENST00000599563 FAM72AQ5TYM5 149 aa13.1□□□□□ -0.31
SH2D3A-208ENST00000599563 FAM72DQ6L9T8 149 aa13.1□□□□□ -0.31
SH2D3A-208ENST00000599563 PSAPL1Q6NUJ1 521 aa13.1□□□□□ -0.31
SH2D3A-208ENST00000599563 FAM72BQ86X60 149 aa13.1□□□□□ -0.31
SH2D3A-208ENST00000599563 ZCCHC9Q8N567 271 aaKnown RBP13.1□□□□□ -0.31
SH2D3A-208ENST00000599563 SNX19Q92543 992 aa13.1□□□□□ -0.31
SH2D3A-208ENST00000599563 HSPH1Q92598 858 aa13.1□□□□□ -0.31
SH2D3A-208ENST00000599563 PTPRN2Q92932 1015 aa13.1□□□□□ -0.31
SH2D3A-208ENST00000599563 ALG14Q96F25 216 aa13.1□□□□□ -0.31
SH2D3A-208ENST00000599563 FAM129BQ96TA1 746 aa13.1□□□□□ -0.31
SH2D3A-208ENST00000599563 ZYG11BQ9C0D3 744 aa13.1□□□□□ -0.31
SH2D3A-208ENST00000599563 PPARGC1AQ9UBK2 798 aaKnown RBP13.1□□□□□ -0.31
SH2D3A-208ENST00000599563 EIF2B4Q9UI10 523 aaKnown RBP13.1□□□□□ -0.31
SH2D3A-208ENST00000599563 AP4E1Q9UPM8 1137 aa13.1□□□□□ -0.31
SH2D3A-208ENST00000599563 NEU3Q9UQ49 428 aa13.1□□□□□ -0.31
SH2D3A-208ENST00000599563 HS3ST2Q9Y278 367 aa13.1□□□□□ -0.31
SH2D3A-208ENST00000599563 OR51B4Q9Y5P0 310 aa13.1□□□□□ -0.31
SH2D3A-208ENST00000599563 ACACBO00763 2458 aa13.1□□□□□ -0.31
SH2D3A-208ENST00000599563 TP53BP1Q12888 1972 aaPredicted RBP13.09□□□□□ -0.31
SH2D3A-208ENST00000599563 CXorf51AA0A1B0GTR3 108 aa13.09□□□□□ -0.31
SH2D3A-208ENST00000599563 ILVBLA1L0T0 632 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms