RNA–Protein interactions for RNA: ENST00000596676.2

SMCO4-206, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 BASIC

Gene SMCO4, Length 180 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-206ENST00000596676 FGGP02679 453 aa15.79■□□□□ 0.12
SMCO4-206ENST00000596676 HOXB2P14652 356 aa15.79■□□□□ 0.12
SMCO4-206ENST00000596676 GKP32189 559 aa15.79■□□□□ 0.12
SMCO4-206ENST00000596676 PXNP49023 591 aaPredicted RBP15.79■□□□□ 0.12
SMCO4-206ENST00000596676 DMWDQ09019 674 aa15.79■□□□□ 0.12
SMCO4-206ENST00000596676 AP1B1Q10567 949 aa15.79■□□□□ 0.12
SMCO4-206ENST00000596676 NOMO1Q15155 1222 aa15.79■□□□□ 0.12
SMCO4-206ENST00000596676 PAPD7Q5XG87 772 aaKnown RBP15.79■□□□□ 0.12
SMCO4-206ENST00000596676 RETSATQ6NUM9 610 aa15.79■□□□□ 0.12
SMCO4-206ENST00000596676 C22orf39Q6P5X5 142 aa15.79■□□□□ 0.12
SMCO4-206ENST00000596676 TSSK4Q6SA08 328 aa15.79■□□□□ 0.12
SMCO4-206ENST00000596676 STK40Q8N2I9 435 aa15.79■□□□□ 0.12
SMCO4-206ENST00000596676 PGBD5Q8N414 524 aa15.79■□□□□ 0.12
SMCO4-206ENST00000596676 SPEM1Q8N4L4 309 aa15.79■□□□□ 0.12
SMCO4-206ENST00000596676 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.79■□□□□ 0.12
SMCO4-206ENST00000596676 TSEN2Q8NCE0 465 aaKnown RBP15.79■□□□□ 0.12
SMCO4-206ENST00000596676 CHST14Q8NCH0 376 aa15.79■□□□□ 0.12
SMCO4-206ENST00000596676 OR6K2Q8NGY2 324 aa15.79■□□□□ 0.12
SMCO4-206ENST00000596676 C1orf54Q8WWF1 131 aa15.79■□□□□ 0.12
SMCO4-206ENST00000596676 HHIPQ96QV1 700 aa15.79■□□□□ 0.12
SMCO4-206ENST00000596676 SPATA6Q9NWH7 488 aaPredicted RBP15.79■□□□□ 0.12
SMCO4-206ENST00000596676 CTAGE9A4FU28 777 aa15.78■□□□□ 0.12
SMCO4-206ENST00000596676 H7C0C1 242 aa15.78■□□□□ 0.12
SMCO4-206ENST00000596676 INSIG1O15503 277 aa15.78■□□□□ 0.12
SMCO4-206ENST00000596676 GPR37L1O60883 481 aa15.78■□□□□ 0.12
SMCO4-206ENST00000596676 MSNP26038 577 aaKnown RBP15.78■□□□□ 0.12
SMCO4-206ENST00000596676 CASQ1P31415 396 aa15.78■□□□□ 0.12
SMCO4-206ENST00000596676 ATP5OP48047 213 aa15.78■□□□□ 0.12
SMCO4-206ENST00000596676 NR2C2P49116 596 aa15.78■□□□□ 0.12
SMCO4-206ENST00000596676 METAP1P53582 386 aa15.78■□□□□ 0.12
SMCO4-206ENST00000596676 EIF3EP60228 445 aaKnown RBP15.78■□□□□ 0.12
SMCO4-206ENST00000596676 SLC20A2Q08357 652 aa15.78■□□□□ 0.12
SMCO4-206ENST00000596676 ZBTB17Q13105 803 aa15.78■□□□□ 0.12
SMCO4-206ENST00000596676 LBRQ14739 615 aaKnown RBP15.78■□□□□ 0.12
SMCO4-206ENST00000596676 PDK1Q15118 436 aa15.78■□□□□ 0.12
SMCO4-206ENST00000596676 CRY1Q16526 586 aa15.78■□□□□ 0.12
SMCO4-206ENST00000596676 LONRF2Q1L5Z9 754 aa15.78■□□□□ 0.12
SMCO4-206ENST00000596676 HNRNPA1L2Q32P51 320 aaKnown RBP15.78■□□□□ 0.12
SMCO4-206ENST00000596676 EOGTQ5NDL2 527 aa15.78■□□□□ 0.12
SMCO4-206ENST00000596676 SDE2Q6IQ49 451 aa15.78■□□□□ 0.12
SMCO4-206ENST00000596676 SYT13Q7L8C5 426 aa15.78■□□□□ 0.12
SMCO4-206ENST00000596676 CACUL1Q86Y37 369 aa15.78■□□□□ 0.12
SMCO4-206ENST00000596676 CCDC13Q8IYE1 715 aa15.78■□□□□ 0.12
SMCO4-206ENST00000596676 MAML2Q8IZL2 1156 aaPredicted RBP15.78■□□□□ 0.12
SMCO4-206ENST00000596676 RASGEF1CQ8N431 466 aa15.78■□□□□ 0.12
SMCO4-206ENST00000596676 DTWD2Q8NBA8 298 aa15.78■□□□□ 0.12
SMCO4-206ENST00000596676 KCNV2Q8TDN2 545 aa15.78■□□□□ 0.12
SMCO4-206ENST00000596676 VOPP1Q96AW1 172 aa15.78■□□□□ 0.12
SMCO4-206ENST00000596676 HDAC11Q96DB2 347 aa15.78■□□□□ 0.12
SMCO4-206ENST00000596676 PBKQ96KB5 322 aa15.78■□□□□ 0.12
SMCO4-206ENST00000596676 CAPZA3Q96KX2 299 aa15.78■□□□□ 0.12
SMCO4-206ENST00000596676 TSGA13Q96PP4 275 aa15.78■□□□□ 0.12
SMCO4-206ENST00000596676 FAM129BQ96TA1 746 aa15.78■□□□□ 0.12
SMCO4-206ENST00000596676 PRDM16Q9HAZ2 1276 aa15.78■□□□□ 0.12
SMCO4-206ENST00000596676 SEPT10Q9P0V9 454 aa15.78■□□□□ 0.12
SMCO4-206ENST00000596676 CKAP5Q14008 2032 aa15.78■□□□□ 0.12
SMCO4-206ENST00000596676 ZSCAN5CA6NGD5 496 aaPredicted RBP15.77■□□□□ 0.12
SMCO4-206ENST00000596676 MATN3O15232 486 aa15.77■□□□□ 0.12
SMCO4-206ENST00000596676 JCHAINP01591 159 aa15.77■□□□□ 0.12
SMCO4-206ENST00000596676 MX2P20592 715 aa15.77■□□□□ 0.12
SMCO4-206ENST00000596676 CCNCP24863 283 aa15.77■□□□□ 0.12
SMCO4-206ENST00000596676 RBL1P28749 1068 aa15.77■□□□□ 0.12
SMCO4-206ENST00000596676 NNMTP40261 264 aa15.77■□□□□ 0.12
SMCO4-206ENST00000596676 VASPP50552 380 aaPredicted RBP15.77■□□□□ 0.12
SMCO4-206ENST00000596676 CLCN6P51797 869 aa15.77■□□□□ 0.12
SMCO4-206ENST00000596676 MAXP61244 160 aa15.77■□□□□ 0.12
SMCO4-206ENST00000596676 PPIDQ08752 370 aaKnown RBP15.77■□□□□ 0.12
SMCO4-206ENST00000596676 CAMK2GQ13555 558 aaPredicted RBP15.77■□□□□ 0.12
SMCO4-206ENST00000596676 SNX1Q13596 522 aa15.77■□□□□ 0.12
SMCO4-206ENST00000596676 PRKD1Q15139 912 aaPredicted RBP15.77■□□□□ 0.12
SMCO4-206ENST00000596676 TMEM31Q5JXX7 168 aa15.77■□□□□ 0.12
SMCO4-206ENST00000596676 DPY19L3Q6ZPD9 716 aa15.77■□□□□ 0.12
SMCO4-206ENST00000596676 TRMT11Q7Z4G4 463 aaKnown RBP15.77■□□□□ 0.12
SMCO4-206ENST00000596676 ZSCAN30Q86W11 494 aa15.77■□□□□ 0.12
SMCO4-206ENST00000596676 OR2A12Q8NGT7 310 aa15.77■□□□□ 0.12
SMCO4-206ENST00000596676 UBE2Q2Q8WVN8 375 aa15.77■□□□□ 0.12
SMCO4-206ENST00000596676 MAML1Q92585 1016 aa15.77■□□□□ 0.12
SMCO4-206ENST00000596676 QKIQ96PU8 341 aaKnown RBP eCLIP15.77■□□□□ 0.12
SMCO4-206ENST00000596676 LRFN3Q9BTN0 628 aa15.77■□□□□ 0.12
SMCO4-206ENST00000596676 AP1M1Q9BXS5 423 aa15.77■□□□□ 0.12
SMCO4-206ENST00000596676 NT5MQ9NPB1 228 aa15.77■□□□□ 0.12
SMCO4-206ENST00000596676 CD93Q9NPY3 652 aa15.77■□□□□ 0.12
SMCO4-206ENST00000596676 DNPEPQ9ULA0 475 aa15.77■□□□□ 0.12
SMCO4-206ENST00000596676 KMT2EQ8IZD2 1858 aa15.77■□□□□ 0.11
SMCO4-206ENST00000596676 EDDM13A0A1B0GTR0 161 aa15.76■□□□□ 0.11
SMCO4-206ENST00000596676 TCRBV21S2A2A0A5A6 115 aa15.76■□□□□ 0.11
SMCO4-206ENST00000596676 F5H423 210 aaPredicted RBP15.76■□□□□ 0.11
SMCO4-206ENST00000596676 K7ESF4 209 aa15.76■□□□□ 0.11
SMCO4-206ENST00000596676 CTSLP07711 333 aa15.76■□□□□ 0.11
SMCO4-206ENST00000596676 RBP3P10745 1247 aa15.76■□□□□ 0.11
SMCO4-206ENST00000596676 CCNB1P14635 433 aa15.76■□□□□ 0.11
SMCO4-206ENST00000596676 CXCL12P48061 93 aa15.76■□□□□ 0.11
SMCO4-206ENST00000596676 COPAP53621 1224 aa15.76■□□□□ 0.11
SMCO4-206ENST00000596676 RHOAP61586 193 aa15.76■□□□□ 0.11
SMCO4-206ENST00000596676 IHHQ14623 411 aa15.76■□□□□ 0.11
SMCO4-206ENST00000596676 POM121L1PQ3SYA9 428 aa15.76■□□□□ 0.11
SMCO4-206ENST00000596676 INO80DQ53TQ3 878 aaPredicted RBP15.76■□□□□ 0.11
SMCO4-206ENST00000596676 CARD16Q5EG05 197 aa15.76■□□□□ 0.11
SMCO4-206ENST00000596676 TMCO4Q5TGY1 634 aa15.76■□□□□ 0.11
SMCO4-206ENST00000596676 PRUNE1Q86TP1 453 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms