RNA–Protein interactions for RNA: ENST00000595756.1

HOMER3-208, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-208ENST00000595756 PREBQ9HCU5 417 aa18.33■□□□□ 0.52
HOMER3-208ENST00000595756 ARHGAP20Q9P2F6 1191 aa18.33■□□□□ 0.52
HOMER3-208ENST00000595756 FARP1Q9Y4F1 1045 aaPredicted RBP18.33■□□□□ 0.52
HOMER3-208ENST00000595756 BZW2Q9Y6E2 419 aaKnown RBP18.33■□□□□ 0.52
HOMER3-208ENST00000595756 TLR4O00206 839 aa18.32■□□□□ 0.52
HOMER3-208ENST00000595756 PLK4O00444 970 aa18.32■□□□□ 0.52
HOMER3-208ENST00000595756 SNAP91O60641 907 aa18.32■□□□□ 0.52
HOMER3-208ENST00000595756 MMEP08473 750 aa18.32■□□□□ 0.52
HOMER3-208ENST00000595756 PRKCIP41743 596 aa18.32■□□□□ 0.52
HOMER3-208ENST00000595756 ARRB1P49407 418 aaPredicted RBP18.32■□□□□ 0.52
HOMER3-208ENST00000595756 OVGP1Q12889 678 aa18.32■□□□□ 0.52
HOMER3-208ENST00000595756 SHBQ15464 509 aa18.32■□□□□ 0.52
HOMER3-208ENST00000595756 SETMARQ53H47 684 aaPredicted RBP18.32■□□□□ 0.52
HOMER3-208ENST00000595756 ARTNQ5T4W7 220 aa18.32■□□□□ 0.52
HOMER3-208ENST00000595756 NAA35Q5VZE5 725 aa18.32■□□□□ 0.52
HOMER3-208ENST00000595756 IRF2BP2Q7Z5L9 587 aa18.32■□□□□ 0.52
HOMER3-208ENST00000595756 MFSD2AQ8NA29 543 aa18.32■□□□□ 0.52
HOMER3-208ENST00000595756 ATP11CQ8NB49 1132 aa18.32■□□□□ 0.52
HOMER3-208ENST00000595756 SAP25Q8TEE9 199 aa18.32■□□□□ 0.52
HOMER3-208ENST00000595756 CFAP57Q96MR6 1250 aa18.32■□□□□ 0.52
HOMER3-208ENST00000595756 AGPAT1Q99943 283 aa18.32■□□□□ 0.52
HOMER3-208ENST00000595756 ZNF212Q9UDV6 495 aa18.32■□□□□ 0.52
HOMER3-208ENST00000595756 SNX10Q9Y5X0 201 aa18.32■□□□□ 0.52
HOMER3-208ENST00000595756 DOCK9Q9BZ29 2069 aa18.32■□□□□ 0.52
HOMER3-208ENST00000595756 GOLGA8SH3BPF8 625 aa18.31■□□□□ 0.52
HOMER3-208ENST00000595756 MAGEC1O60732 1142 aa18.31■□□□□ 0.52
HOMER3-208ENST00000595756 MT-CO1P00395 513 aa18.31■□□□□ 0.52
HOMER3-208ENST00000595756 CTSLP07711 333 aa18.31■□□□□ 0.52
HOMER3-208ENST00000595756 OR1E1P30953 314 aa18.31■□□□□ 0.52
HOMER3-208ENST00000595756 FMO1Q01740 532 aa18.31■□□□□ 0.52
HOMER3-208ENST00000595756 TSR1Q2NL82 804 aaKnown RBP18.31■□□□□ 0.52
HOMER3-208ENST00000595756 C2CD6Q53TS8 623 aa18.31■□□□□ 0.52
HOMER3-208ENST00000595756 PIP5KL1Q5T9C9 394 aa18.31■□□□□ 0.52
HOMER3-208ENST00000595756 C22orf39Q6P5X5 142 aa18.31■□□□□ 0.52
HOMER3-208ENST00000595756 TFAP2DQ7Z6R9 452 aa18.31■□□□□ 0.52
HOMER3-208ENST00000595756 TMIEQ8NEW7 156 aa18.31■□□□□ 0.52
HOMER3-208ENST00000595756 OR2A12Q8NGT7 310 aa18.31■□□□□ 0.52
HOMER3-208ENST00000595756 CPLX3Q8WVH0 158 aa18.31■□□□□ 0.52
HOMER3-208ENST00000595756 CPA5Q8WXQ8 436 aa18.31■□□□□ 0.52
HOMER3-208ENST00000595756 METTL5Q9NRN9 209 aaKnown RBP18.31■□□□□ 0.52
HOMER3-208ENST00000595756 TMPRSS4Q9NRS4 437 aa18.31■□□□□ 0.52
HOMER3-208ENST00000595756 MPP6Q9NZW5 540 aa18.31■□□□□ 0.52
HOMER3-208ENST00000595756 A0A0D9SEW6 157 aa18.3■□□□□ 0.52
HOMER3-208ENST00000595756 ILVBLA1L0T0 632 aa18.3■□□□□ 0.52
HOMER3-208ENST00000595756 GOLGA8CPA6NN73 597 aa18.3■□□□□ 0.52
HOMER3-208ENST00000595756 BNIP3LO60238 219 aa18.3■□□□□ 0.52
HOMER3-208ENST00000595756 ENDOD1O94919 500 aa18.3■□□□□ 0.52
HOMER3-208ENST00000595756 PRNPP04156 253 aa18.3■□□□□ 0.52
HOMER3-208ENST00000595756 CYP1A1P04798 512 aaPredicted RBP18.3■□□□□ 0.52
HOMER3-208ENST00000595756 GYPCP04921 128 aa18.3■□□□□ 0.52
HOMER3-208ENST00000595756 ITGAVP06756 1048 aa18.3■□□□□ 0.52
HOMER3-208ENST00000595756 TNFAIP3P21580 790 aa18.3■□□□□ 0.52
HOMER3-208ENST00000595756 RRM1P23921 792 aa18.3■□□□□ 0.52
HOMER3-208ENST00000595756 MAT2AP31153 395 aaKnown RBP18.3■□□□□ 0.52
HOMER3-208ENST00000595756 CHRNA3P32297 505 aa18.3■□□□□ 0.52
HOMER3-208ENST00000595756 RXRGP48443 463 aa18.3■□□□□ 0.52
HOMER3-208ENST00000595756 TAS2R38P59533 333 aa18.3■□□□□ 0.52
HOMER3-208ENST00000595756 KLHL30Q0D2K2 578 aa18.3■□□□□ 0.52
HOMER3-208ENST00000595756 CCDC15Q0P6D6 951 aa18.3■□□□□ 0.52
HOMER3-208ENST00000595756 SMAD1Q15797 465 aaKnown RBP18.3■□□□□ 0.52
HOMER3-208ENST00000595756 POM121L1PQ3SYA9 428 aa18.3■□□□□ 0.52
HOMER3-208ENST00000595756 VPS36Q86VN1 386 aa18.3■□□□□ 0.52
HOMER3-208ENST00000595756 FAM131BQ86XD5 332 aa18.3■□□□□ 0.52
HOMER3-208ENST00000595756 GATAD2AQ86YP4 633 aa18.3■□□□□ 0.52
HOMER3-208ENST00000595756 SLC20A1Q8WUM9 679 aa18.3■□□□□ 0.52
HOMER3-208ENST00000595756 MRFAP1L1Q96HT8 127 aa18.3■□□□□ 0.52
HOMER3-208ENST00000595756 ZYG11BQ9C0D3 744 aa18.3■□□□□ 0.52
HOMER3-208ENST00000595756 CCDC86Q9H6F5 360 aaKnown RBP18.3■□□□□ 0.52
HOMER3-208ENST00000595756 PPARGC1AQ9UBK2 798 aaKnown RBP18.3■□□□□ 0.52
HOMER3-208ENST00000595756 PCDHGA1Q9Y5H4 931 aa18.3■□□□□ 0.52
HOMER3-208ENST00000595756 CXorf51AA0A1B0GTR3 108 aa18.29■□□□□ 0.52
HOMER3-208ENST00000595756 PRAMEF26H0Y7S4 382 aa18.29■□□□□ 0.52
HOMER3-208ENST00000595756 TAF4O00268 1085 aa18.29■□□□□ 0.52
HOMER3-208ENST00000595756 RNGTTO60942 597 aaKnown RBP18.29■□□□□ 0.52
HOMER3-208ENST00000595756 CHRNB2P17787 502 aa18.29■□□□□ 0.52
HOMER3-208ENST00000595756 MMP8P22894 467 aa18.29■□□□□ 0.52
HOMER3-208ENST00000595756 CASP14P31944 242 aa18.29■□□□□ 0.52
HOMER3-208ENST00000595756 GSCP56915 257 aaPredicted RBP18.29■□□□□ 0.52
HOMER3-208ENST00000595756 NRG1Q02297 640 aaPredicted RBP18.29■□□□□ 0.52
HOMER3-208ENST00000595756 PRAMEF14Q5SWL7 426 aa18.29■□□□□ 0.52
HOMER3-208ENST00000595756 RETSATQ6NUM9 610 aa18.29■□□□□ 0.52
HOMER3-208ENST00000595756 NEK5Q6P3R8 708 aa18.29■□□□□ 0.52
HOMER3-208ENST00000595756 DRC7Q8IY82 874 aa18.29■□□□□ 0.52
HOMER3-208ENST00000595756 PPP1R16AQ96I34 528 aa18.29■□□□□ 0.52
HOMER3-208ENST00000595756 CEP44Q9C0F1 390 aa18.29■□□□□ 0.52
HOMER3-208ENST00000595756 DYRK4Q9NR20 520 aa18.29■□□□□ 0.52
HOMER3-208ENST00000595756 SEPT11Q9NVA2 429 aaKnown RBP18.29■□□□□ 0.52
HOMER3-208ENST00000595756 DKK4Q9UBT3 224 aa18.29■□□□□ 0.52
HOMER3-208ENST00000595756 LOC400499M0QZD8 3231 aa18.29■□□□□ 0.52
HOMER3-208ENST00000595756 APC2O95996 2303 aa18.29■□□□□ 0.52
HOMER3-208ENST00000595756 ACACAQ13085 2346 aa18.29■□□□□ 0.52
HOMER3-208ENST00000595756 FAM170AA1A519 330 aa18.28■□□□□ 0.52
HOMER3-208ENST00000595756 K7ERQ8 282 aa18.28■□□□□ 0.52
HOMER3-208ENST00000595756 KPNA3O00505 521 aaPredicted RBP18.28■□□□□ 0.52
HOMER3-208ENST00000595756 ENC1O14682 589 aa18.28■□□□□ 0.52
HOMER3-208ENST00000595756 SMAD6O43541 496 aaKnown RBP18.28■□□□□ 0.52
HOMER3-208ENST00000595756 SRGAP2O75044 1071 aa18.28■□□□□ 0.52
HOMER3-208ENST00000595756 SERPING1P05155 500 aa18.28■□□□□ 0.52
HOMER3-208ENST00000595756 UNGP13051 313 aaPredicted RBP18.28■□□□□ 0.52
HOMER3-208ENST00000595756 GLDCP23378 1020 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms