RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 NAPEPLDQ6IQ20 393 aa23.98■■□□□ 1.43
LSM4-204ENST00000594828 FAM72DQ6L9T8 149 aa23.98■■□□□ 1.43
LSM4-204ENST00000594828 FAM72BQ86X60 149 aa23.98■■□□□ 1.43
LSM4-204ENST00000594828 ELF4Q99607 663 aaPredicted RBP23.98■■□□□ 1.43
LSM4-204ENST00000594828 CEP44Q9C0F1 390 aa23.98■■□□□ 1.43
LSM4-204ENST00000594828 PREBQ9HCU5 417 aa23.98■■□□□ 1.43
LSM4-204ENST00000594828 RTN4Q9NQC3 1192 aaKnown RBP23.98■■□□□ 1.43
LSM4-204ENST00000594828 DYRK4Q9NR20 520 aa23.98■■□□□ 1.43
LSM4-204ENST00000594828 GDF3Q9NR23 364 aa23.98■■□□□ 1.43
LSM4-204ENST00000594828 IL36AQ9UHA7 158 aa23.98■■□□□ 1.43
LSM4-204ENST00000594828 DMTF1Q9Y222 760 aa23.98■■□□□ 1.43
LSM4-204ENST00000594828 FAM221BA6H8Z2 402 aa23.97■■□□□ 1.43
LSM4-204ENST00000594828 ANKRD62A6NC57 917 aa23.97■■□□□ 1.43
LSM4-204ENST00000594828 TLR4O00206 839 aa23.97■■□□□ 1.43
LSM4-204ENST00000594828 ZNF821O75541 412 aaPredicted RBP23.97■■□□□ 1.43
LSM4-204ENST00000594828 LRIG2O94898 1065 aa23.97■■□□□ 1.43
LSM4-204ENST00000594828 ETFBP38117 255 aa23.97■■□□□ 1.43
LSM4-204ENST00000594828 MAPKAPK2P49137 400 aa23.97■■□□□ 1.43
LSM4-204ENST00000594828 TAS2R38P59533 333 aa23.97■■□□□ 1.43
LSM4-204ENST00000594828 PIP5KL1Q5T9C9 394 aa23.97■■□□□ 1.43
LSM4-204ENST00000594828 DNAJC24Q6P3W2 148 aa23.97■■□□□ 1.43
LSM4-204ENST00000594828 DPY19L3Q6ZPD9 716 aa23.97■■□□□ 1.43
LSM4-204ENST00000594828 IRF2BP2Q7Z5L9 587 aa23.97■■□□□ 1.43
LSM4-204ENST00000594828 NLRP14Q86W24 1093 aa23.97■■□□□ 1.43
LSM4-204ENST00000594828 MFSD2AQ8NA29 543 aa23.97■■□□□ 1.43
LSM4-204ENST00000594828 GRIN3AQ8TCU5 1115 aa23.97■■□□□ 1.43
LSM4-204ENST00000594828 NTAN1Q96AB6 310 aa23.97■■□□□ 1.43
LSM4-204ENST00000594828 ARRDC3Q96B67 414 aa23.97■■□□□ 1.43
LSM4-204ENST00000594828 TBC1D31Q96DN5 1066 aa23.97■■□□□ 1.43
LSM4-204ENST00000594828 NDFIP2Q9NV92 336 aa23.97■■□□□ 1.43
LSM4-204ENST00000594828 TMEM248Q9NWD8 314 aa23.97■■□□□ 1.43
LSM4-204ENST00000594828 DNAI1Q9UI46 699 aa23.97■■□□□ 1.43
LSM4-204ENST00000594828 MYO6Q9UM54 1294 aa23.97■■□□□ 1.43
LSM4-204ENST00000594828 CHD8Q9HCK8 2581 aa23.97■■□□□ 1.43
LSM4-204ENST00000594828 TCRBV5S1A1TA0A578 114 aa23.96■■□□□ 1.43
LSM4-204ENST00000594828 TNFAIP3P21580 790 aa23.96■■□□□ 1.43
LSM4-204ENST00000594828 ACVRL1P37023 503 aa23.96■■□□□ 1.43
LSM4-204ENST00000594828 DNA2P51530 1060 aa23.96■■□□□ 1.43
LSM4-204ENST00000594828 ZNF143P52747 638 aaPredicted RBP23.96■■□□□ 1.43
LSM4-204ENST00000594828 STAT4Q14765 748 aa23.96■■□□□ 1.43
LSM4-204ENST00000594828 SETMARQ53H47 684 aaPredicted RBP23.96■■□□□ 1.43
LSM4-204ENST00000594828 ACAD10Q6JQN1 1059 aa23.96■■□□□ 1.43
LSM4-204ENST00000594828 CAVIN1Q6NZI2 390 aaKnown RBP23.96■■□□□ 1.43
LSM4-204ENST00000594828 SLFN11Q7Z7L1 901 aa23.96■■□□□ 1.43
LSM4-204ENST00000594828 PCDH20Q8N6Y1 951 aaKnown RBP23.96■■□□□ 1.43
LSM4-204ENST00000594828 KDF1Q8NAX2 398 aaPredicted RBP23.96■■□□□ 1.43
LSM4-204ENST00000594828 ARHGEF2Q92974 986 aaKnown RBP23.96■■□□□ 1.43
LSM4-204ENST00000594828 CXorf51AA0A1B0GTR3 108 aa23.95■■□□□ 1.42
LSM4-204ENST00000594828 RNF103O00237 685 aa23.95■■□□□ 1.42
LSM4-204ENST00000594828 RNGTTO60942 597 aaKnown RBP23.95■■□□□ 1.42
LSM4-204ENST00000594828 LEFTY1O75610 366 aa23.95■■□□□ 1.42
LSM4-204ENST00000594828 ATXN1LP0C7T5 689 aaKnown RBP23.95■■□□□ 1.42
LSM4-204ENST00000594828 NXPH1P58417 271 aa23.95■■□□□ 1.42
LSM4-204ENST00000594828 RPL7AP62424 266 aaKnown RBP23.95■■□□□ 1.42
LSM4-204ENST00000594828 INAVAQ3KP66 663 aa23.95■■□□□ 1.42
LSM4-204ENST00000594828 FILIP1LQ4L180 1135 aa23.95■■□□□ 1.42
LSM4-204ENST00000594828 CARD16Q5EG05 197 aa23.95■■□□□ 1.42
LSM4-204ENST00000594828 NEK5Q6P3R8 708 aa23.95■■□□□ 1.42
LSM4-204ENST00000594828 SCYL2Q6P3W7 929 aa23.95■■□□□ 1.42
LSM4-204ENST00000594828 ERN2Q76MJ5 926 aaKnown RBP23.95■■□□□ 1.42
LSM4-204ENST00000594828 MCOLN2Q8IZK6 566 aa23.95■■□□□ 1.42
LSM4-204ENST00000594828 PPP1R16AQ96I34 528 aa23.95■■□□□ 1.42
LSM4-204ENST00000594828 MCEEQ96PE7 176 aa23.95■■□□□ 1.42
LSM4-204ENST00000594828 MAGEH1Q9H213 219 aa23.95■■□□□ 1.42
LSM4-204ENST00000594828 FCF1Q9Y324 198 aaKnown RBP23.95■■□□□ 1.42
LSM4-204ENST00000594828 MAP1BP46821 2468 aaKnown RBP23.94■■□□□ 1.42
LSM4-204ENST00000594828 KNL1Q8NG31 2342 aa23.94■■□□□ 1.42
LSM4-204ENST00000594828 TMEM8BA6NDV4 472 aa23.94■■□□□ 1.42
LSM4-204ENST00000594828 PRAMEF26H0Y7S4 382 aa23.94■■□□□ 1.42
LSM4-204ENST00000594828 CCP110O43303 1012 aa23.94■■□□□ 1.42
LSM4-204ENST00000594828 TNFSF14O43557 240 aa23.94■■□□□ 1.42
LSM4-204ENST00000594828 MAGEC1O60732 1142 aa23.94■■□□□ 1.42
LSM4-204ENST00000594828 ZNF165P49910 485 aa23.94■■□□□ 1.42
LSM4-204ENST00000594828 SCAPQ12770 1279 aa23.94■■□□□ 1.42
LSM4-204ENST00000594828 DCUN1D2Q6PH85 259 aa23.94■■□□□ 1.42
LSM4-204ENST00000594828 IQCHQ86VS3 1027 aa23.94■■□□□ 1.42
LSM4-204ENST00000594828 GATAD2AQ86YP4 633 aa23.94■■□□□ 1.42
LSM4-204ENST00000594828 BAP1Q92560 729 aa23.94■■□□□ 1.42
LSM4-204ENST00000594828 HEPHQ9BQS7 1158 aa23.94■■□□□ 1.42
LSM4-204ENST00000594828 HDAC8Q9BY41 377 aa23.94■■□□□ 1.42
LSM4-204ENST00000594828 ERVMER34-1Q9H9K5 563 aa23.94■■□□□ 1.42
LSM4-204ENST00000594828 TOR4AQ9NXH8 423 aa23.94■■□□□ 1.42
LSM4-204ENST00000594828 HPCAL4Q9UM19 191 aa23.94■■□□□ 1.42
LSM4-204ENST00000594828 NEU3Q9UQ49 428 aa23.94■■□□□ 1.42
LSM4-204ENST00000594828 ACTL7AQ9Y615 435 aa23.94■■□□□ 1.42
LSM4-204ENST00000594828 WASF2Q9Y6W5 498 aa23.94■■□□□ 1.42
LSM4-204ENST00000594828 A0A1W2PQU0 124 aa23.93■■□□□ 1.42
LSM4-204ENST00000594828 GOLGA8CPA6NN73 597 aa23.93■■□□□ 1.42
LSM4-204ENST00000594828 YKT6O15498 198 aa23.93■■□□□ 1.42
LSM4-204ENST00000594828 RAMP2O60895 175 aa23.93■■□□□ 1.42
LSM4-204ENST00000594828 CD160O95971 181 aa23.93■■□□□ 1.42
LSM4-204ENST00000594828 ITGAVP06756 1048 aa23.93■■□□□ 1.42
LSM4-204ENST00000594828 L1CAMP32004 1257 aa23.93■■□□□ 1.42
LSM4-204ENST00000594828 ARRB1P49407 418 aaPredicted RBP23.93■■□□□ 1.42
LSM4-204ENST00000594828 GEMIN4P57678 1058 aaKnown RBP23.93■■□□□ 1.42
LSM4-204ENST00000594828 OVGP1Q12889 678 aa23.93■■□□□ 1.42
LSM4-204ENST00000594828 POLD3Q15054 466 aaPredicted RBP23.93■■□□□ 1.42
LSM4-204ENST00000594828 SHBQ15464 509 aa23.93■■□□□ 1.42
LSM4-204ENST00000594828 EFHC2Q5JST6 749 aa23.93■■□□□ 1.42
LSM4-204ENST00000594828 PPP1R15BQ5SWA1 713 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms