RNA–Protein interactions for RNA: ENST00000592965.2

MBD3-211, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 4

Gene MBD3, Length 568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-211ENST00000592965 TLR4O00206 839 aa23.79■■□□□ 1.4
MBD3-211ENST00000592965 CBX4O00257 560 aa23.79■■□□□ 1.4
MBD3-211ENST00000592965 TNFSF14O43557 240 aa23.79■■□□□ 1.4
MBD3-211ENST00000592965 PRNPP04156 253 aa23.79■■□□□ 1.4
MBD3-211ENST00000592965 SERPINH1P50454 418 aaKnown RBP23.79■■□□□ 1.4
MBD3-211ENST00000592965 GNA12Q03113 381 aa23.79■■□□□ 1.4
MBD3-211ENST00000592965 SLC20A2Q08357 652 aa23.79■■□□□ 1.4
MBD3-211ENST00000592965 CCDC15Q0P6D6 951 aa23.79■■□□□ 1.4
MBD3-211ENST00000592965 CLEC16AQ2KHT3 1053 aa23.79■■□□□ 1.4
MBD3-211ENST00000592965 SETMARQ53H47 684 aaPredicted RBP23.79■■□□□ 1.4
MBD3-211ENST00000592965 PHLDB2Q86SQ0 1253 aa23.79■■□□□ 1.4
MBD3-211ENST00000592965 IQCHQ86VS3 1027 aa23.79■■□□□ 1.4
MBD3-211ENST00000592965 SPON2Q9BUD6 331 aa23.79■■□□□ 1.4
MBD3-211ENST00000592965 CEP44Q9C0F1 390 aa23.79■■□□□ 1.4
MBD3-211ENST00000592965 OSBPL2Q9H1P3 480 aa23.79■■□□□ 1.4
MBD3-211ENST00000592965 ERVMER34-1Q9H9K5 563 aa23.79■■□□□ 1.4
MBD3-211ENST00000592965 ATP13A1Q9HD20 1204 aa23.79■■□□□ 1.4
MBD3-211ENST00000592965 ADAM22Q9P0K1 906 aa23.79■■□□□ 1.4
MBD3-211ENST00000592965 OR12D3Q9UGF7 316 aa23.79■■□□□ 1.4
MBD3-211ENST00000592965 TRPM6Q9BX84 2022 aa23.78■■□□□ 1.4
MBD3-211ENST00000592965 CXorf51AA0A1B0GTR3 108 aa23.78■■□□□ 1.4
MBD3-211ENST00000592965 KPNA3O00505 521 aaPredicted RBP23.78■■□□□ 1.4
MBD3-211ENST00000592965 CALB1P05937 261 aa23.78■■□□□ 1.4
MBD3-211ENST00000592965 MAT2AP31153 395 aaKnown RBP23.78■■□□□ 1.4
MBD3-211ENST00000592965 OVGP1Q12889 678 aa23.78■■□□□ 1.4
MBD3-211ENST00000592965 SHBQ15464 509 aa23.78■■□□□ 1.4
MBD3-211ENST00000592965 NEK5Q6P3R8 708 aa23.78■■□□□ 1.4
MBD3-211ENST00000592965 CCNI2Q6ZMN8 369 aaPredicted RBP23.78■■□□□ 1.4
MBD3-211ENST00000592965 DRC7Q8IY82 874 aa23.78■■□□□ 1.4
MBD3-211ENST00000592965 OXR1Q8N573 874 aa23.78■■□□□ 1.4
MBD3-211ENST00000592965 CHST14Q8NCH0 376 aa23.78■■□□□ 1.4
MBD3-211ENST00000592965 C3orf20Q8ND61 904 aa23.78■■□□□ 1.4
MBD3-211ENST00000592965 SAP25Q8TEE9 199 aa23.78■■□□□ 1.4
MBD3-211ENST00000592965 ARRDC3Q96B67 414 aa23.78■■□□□ 1.4
MBD3-211ENST00000592965 ZNF821O75541 412 aaPredicted RBP23.77■■□□□ 1.4
MBD3-211ENST00000592965 GJB6O95452 261 aa23.77■■□□□ 1.4
MBD3-211ENST00000592965 KRT3P12035 628 aa23.77■■□□□ 1.4
MBD3-211ENST00000592965 RHOQP17081 205 aa23.77■■□□□ 1.4
MBD3-211ENST00000592965 CDK11BP21127 795 aaKnown RBP23.77■■□□□ 1.4
MBD3-211ENST00000592965 ETFBP38117 255 aa23.77■■□□□ 1.4
MBD3-211ENST00000592965 RECQLP46063 649 aaPredicted RBP23.77■■□□□ 1.4
MBD3-211ENST00000592965 MAPKAPK2P49137 400 aa23.77■■□□□ 1.4
MBD3-211ENST00000592965 ARRB1P49407 418 aaPredicted RBP23.77■■□□□ 1.4
MBD3-211ENST00000592965 HDAC4P56524 1084 aa23.77■■□□□ 1.4
MBD3-211ENST00000592965 ARF5P84085 180 aa23.77■■□□□ 1.4
MBD3-211ENST00000592965 PRAMEF14Q5SWL7 426 aa23.77■■□□□ 1.4
MBD3-211ENST00000592965 DPY19L3Q6ZPD9 716 aa23.77■■□□□ 1.4
MBD3-211ENST00000592965 NLRP14Q86W24 1093 aa23.77■■□□□ 1.4
MBD3-211ENST00000592965 PCDH20Q8N6Y1 951 aaKnown RBP23.77■■□□□ 1.4
MBD3-211ENST00000592965 NTAN1Q96AB6 310 aa23.77■■□□□ 1.4
MBD3-211ENST00000592965 HDAC8Q9BY41 377 aa23.77■■□□□ 1.4
MBD3-211ENST00000592965 TNKS2Q9H2K2 1166 aa23.77■■□□□ 1.4
MBD3-211ENST00000592965 DYRK4Q9NR20 520 aa23.77■■□□□ 1.4
MBD3-211ENST00000592965 FTSJ1Q9UET6 329 aa23.77■■□□□ 1.4
MBD3-211ENST00000592965 IL36AQ9UHA7 158 aa23.77■■□□□ 1.4
MBD3-211ENST00000592965 NEU3Q9UQ49 428 aa23.77■■□□□ 1.4
MBD3-211ENST00000592965 PRAMEF26H0Y7S4 382 aa23.76■■□□□ 1.39
MBD3-211ENST00000592965 MAGEC1O60732 1142 aa23.76■■□□□ 1.39
MBD3-211ENST00000592965 EPHA8P29322 1005 aaPredicted RBP23.76■■□□□ 1.39
MBD3-211ENST00000592965 RFC1P35251 1148 aaPredicted RBP23.76■■□□□ 1.39
MBD3-211ENST00000592965 RXRGP48443 463 aa23.76■■□□□ 1.39
MBD3-211ENST00000592965 MON1BQ7L1V2 547 aa23.76■■□□□ 1.39
MBD3-211ENST00000592965 TMPRSS7Q7RTY8 843 aa23.76■■□□□ 1.39
MBD3-211ENST00000592965 GATAD2AQ86YP4 633 aa23.76■■□□□ 1.39
MBD3-211ENST00000592965 GRIN3AQ8TCU5 1115 aa23.76■■□□□ 1.39
MBD3-211ENST00000592965 FAM172AQ8WUF8 416 aa23.76■■□□□ 1.39
MBD3-211ENST00000592965 TMEM248Q9NWD8 314 aa23.76■■□□□ 1.39
MBD3-211ENST00000592965 RNGTTO60942 597 aaKnown RBP23.75■■□□□ 1.39
MBD3-211ENST00000592965 CAPNS1P04632 268 aa23.75■■□□□ 1.39
MBD3-211ENST00000592965 GPD1P21695 349 aa23.75■■□□□ 1.39
MBD3-211ENST00000592965 TYRO3Q06418 890 aa23.75■■□□□ 1.39
MBD3-211ENST00000592965 C1QBPQ07021 282 aaKnown RBP23.75■■□□□ 1.39
MBD3-211ENST00000592965 SCAPQ12770 1279 aa23.75■■□□□ 1.39
MBD3-211ENST00000592965 ARSIQ5FYB1 569 aa23.75■■□□□ 1.39
MBD3-211ENST00000592965 RWDD4Q6NW29 188 aaKnown RBP23.75■■□□□ 1.39
MBD3-211ENST00000592965 ERN2Q76MJ5 926 aaKnown RBP23.75■■□□□ 1.39
MBD3-211ENST00000592965 SPATS2Q86XZ4 545 aaKnown RBP23.75■■□□□ 1.39
MBD3-211ENST00000592965 CCDC185Q8N715 623 aa23.75■■□□□ 1.39
MBD3-211ENST00000592965 TMEM145Q8NBT3 493 aa23.75■■□□□ 1.39
MBD3-211ENST00000592965 TBC1D31Q96DN5 1066 aa23.75■■□□□ 1.39
MBD3-211ENST00000592965 PPP1R16AQ96I34 528 aa23.75■■□□□ 1.39
MBD3-211ENST00000592965 AGPAT1Q99943 283 aa23.75■■□□□ 1.39
MBD3-211ENST00000592965 SELENOOQ9BVL4 669 aa23.75■■□□□ 1.39
MBD3-211ENST00000592965 WASF2Q9Y6W5 498 aa23.75■■□□□ 1.39
MBD3-211ENST00000592965 A0A1W2PQU0 124 aa23.74■■□□□ 1.39
MBD3-211ENST00000592965 TCRBV5S1A1TA0A578 114 aa23.74■■□□□ 1.39
MBD3-211ENST00000592965 SIGLEC16A6NMB1 481 aa23.74■■□□□ 1.39
MBD3-211ENST00000592965 FAM72CH0Y354 149 aa23.74■■□□□ 1.39
MBD3-211ENST00000592965 RNF103O00237 685 aa23.74■■□□□ 1.39
MBD3-211ENST00000592965 LEFTY1O75610 366 aa23.74■■□□□ 1.39
MBD3-211ENST00000592965 LRIG2O94898 1065 aa23.74■■□□□ 1.39
MBD3-211ENST00000592965 ITGAVP06756 1048 aa23.74■■□□□ 1.39
MBD3-211ENST00000592965 PLEKP08567 350 aaPredicted RBP23.74■■□□□ 1.39
MBD3-211ENST00000592965 ATP1A3P13637 1013 aa23.74■■□□□ 1.39
MBD3-211ENST00000592965 ACVRL1P37023 503 aa23.74■■□□□ 1.39
MBD3-211ENST00000592965 STAT4Q14765 748 aa23.74■■□□□ 1.39
MBD3-211ENST00000592965 FAM72AQ5TYM5 149 aa23.74■■□□□ 1.39
MBD3-211ENST00000592965 FAM72DQ6L9T8 149 aa23.74■■□□□ 1.39
MBD3-211ENST00000592965 WDR59Q6PJI9 974 aa23.74■■□□□ 1.39
MBD3-211ENST00000592965 HORMAD1Q86X24 394 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms