RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 LRRC49Q8IUZ0 686 aa16.83■□□□□ 0.28
PRKCSH-217ENST00000592741 DCP1BQ8IZD4 617 aaKnown RBP16.83■□□□□ 0.28
PRKCSH-217ENST00000592741 ACVR1CQ8NER5 493 aa16.83■□□□□ 0.28
PRKCSH-217ENST00000592741 CDH19Q9H159 772 aa16.83■□□□□ 0.28
PRKCSH-217ENST00000592741 NMUR1Q9HB89 426 aa16.83■□□□□ 0.28
PRKCSH-217ENST00000592741 MRM3Q9HC36 420 aaKnown RBP16.83■□□□□ 0.28
PRKCSH-217ENST00000592741 NMRK2Q9NPI5 230 aa16.83■□□□□ 0.28
PRKCSH-217ENST00000592741 ENTPD7Q9NQZ7 604 aa16.83■□□□□ 0.28
PRKCSH-217ENST00000592741 RBM22Q9NW64 420 aaKnown RBP eCLIP16.83■□□□□ 0.283e-7■■■■□ 21.7
PRKCSH-217ENST00000592741 ABI2Q9NYB9 513 aaPredicted RBP16.83■□□□□ 0.28
PRKCSH-217ENST00000592741 HS3ST4Q9Y661 456 aa16.83■□□□□ 0.28
PRKCSH-217ENST00000592741 SQORQ9Y6N5 450 aa16.83■□□□□ 0.28
PRKCSH-217ENST00000592741 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.83■□□□□ 0.28
PRKCSH-217ENST00000592741 FNDC1Q4ZHG4 1894 aaPredicted RBP16.83■□□□□ 0.28
PRKCSH-217ENST00000592741 KCNU1A8MYU2 1149 aa16.82■□□□□ 0.28
PRKCSH-217ENST00000592741 F8W8V4 182 aa16.82■□□□□ 0.28
PRKCSH-217ENST00000592741 LUC7L3O95232 432 aaKnown RBP16.82■□□□□ 0.28
PRKCSH-217ENST00000592741 HLA-DQB2P05538 268 aa16.82■□□□□ 0.28
PRKCSH-217ENST00000592741 CST5P28325 142 aaPredicted RBP16.82■□□□□ 0.28
PRKCSH-217ENST00000592741 CCND3P30281 292 aaPredicted RBP16.82■□□□□ 0.28
PRKCSH-217ENST00000592741 CSRP3P50461 194 aa16.82■□□□□ 0.28
PRKCSH-217ENST00000592741 PRKCZQ05513 592 aa16.82■□□□□ 0.28
PRKCSH-217ENST00000592741 THOC5Q13769 683 aaKnown RBP16.82■□□□□ 0.28
PRKCSH-217ENST00000592741 AFMIDQ63HM1 303 aa16.82■□□□□ 0.28
PRKCSH-217ENST00000592741 CCSAPQ6IQ19 270 aaPredicted RBP16.82■□□□□ 0.28
PRKCSH-217ENST00000592741 CNTN4Q8IWV2 1026 aa16.82■□□□□ 0.28
PRKCSH-217ENST00000592741 ULK2Q8IYT8 1036 aa16.82■□□□□ 0.28
PRKCSH-217ENST00000592741 MAB21L3Q8N8X9 362 aa16.82■□□□□ 0.28
PRKCSH-217ENST00000592741 GPATCH11Q8N954 259 aa16.82■□□□□ 0.28
PRKCSH-217ENST00000592741 PCSK9Q8NBP7 692 aaKnown RBP16.82■□□□□ 0.28
PRKCSH-217ENST00000592741 ZNF419Q96HQ0 510 aaPredicted RBP16.82■□□□□ 0.28
PRKCSH-217ENST00000592741 NAF1Q96HR8 494 aaKnown RBP16.82■□□□□ 0.28
PRKCSH-217ENST00000592741 THTPAQ9BU02 230 aa16.82■□□□□ 0.28
PRKCSH-217ENST00000592741 FSD1LQ9BXM9 530 aa16.82■□□□□ 0.28
PRKCSH-217ENST00000592741 TASP1Q9H6P5 420 aa16.82■□□□□ 0.28
PRKCSH-217ENST00000592741 NUDT5Q9UKK9 219 aa16.82■□□□□ 0.28
PRKCSH-217ENST00000592741 TCAF1Q9Y4C2 921 aa16.82■□□□□ 0.28
PRKCSH-217ENST00000592741 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.82■□□□□ 0.28
PRKCSH-217ENST00000592741 FAM155AB1AL88 458 aaPredicted RBP16.82■□□□□ 0.28
PRKCSH-217ENST00000592741 PAMP19021 973 aa16.82■□□□□ 0.28
PRKCSH-217ENST00000592741 SAT1P21673 171 aa16.82■□□□□ 0.28
PRKCSH-217ENST00000592741 ADRA1AP35348 466 aa16.82■□□□□ 0.28
PRKCSH-217ENST00000592741 GCKP35557 465 aa16.82■□□□□ 0.28
PRKCSH-217ENST00000592741 VHLP40337 213 aa16.82■□□□□ 0.28
PRKCSH-217ENST00000592741 POLD2P49005 469 aa16.82■□□□□ 0.28
PRKCSH-217ENST00000592741 PAPOLAP51003 745 aaKnown RBP16.82■□□□□ 0.28
PRKCSH-217ENST00000592741 PRKAA2P54646 552 aa16.82■□□□□ 0.28
PRKCSH-217ENST00000592741 SESN3P58005 492 aa16.82■□□□□ 0.28
PRKCSH-217ENST00000592741 SLC12A1Q13621 1099 aa16.82■□□□□ 0.28
PRKCSH-217ENST00000592741 ITGA7Q13683 1181 aa16.82■□□□□ 0.28
PRKCSH-217ENST00000592741 TRMT5Q32P41 509 aaKnown RBP16.82■□□□□ 0.28
PRKCSH-217ENST00000592741 DENND5AQ6IQ26 1287 aa16.82■□□□□ 0.28
PRKCSH-217ENST00000592741 ZYG11AQ6WRX3 759 aa16.82■□□□□ 0.28
PRKCSH-217ENST00000592741 NAPRTQ6XQN6 538 aa16.82■□□□□ 0.28
PRKCSH-217ENST00000592741 ZNF781Q8N8C0 355 aa16.82■□□□□ 0.28
PRKCSH-217ENST00000592741 ACE2Q9BYF1 805 aaPredicted RBP16.82■□□□□ 0.28
PRKCSH-217ENST00000592741 ZCWPW1Q9H0M4 648 aa16.82■□□□□ 0.28
PRKCSH-217ENST00000592741 BATF3Q9NR55 127 aa16.82■□□□□ 0.28
PRKCSH-217ENST00000592741 NDFIP2Q9NV92 336 aa16.82■□□□□ 0.28
PRKCSH-217ENST00000592741 OXSMQ9NWU1 459 aa16.82■□□□□ 0.28
PRKCSH-217ENST00000592741 FNIP2Q9P278 1114 aa16.82■□□□□ 0.28
PRKCSH-217ENST00000592741 WASH4PA8MWX3 477 aa16.81■□□□□ 0.28
PRKCSH-217ENST00000592741 DNAJB1P25685 340 aa16.81■□□□□ 0.28
PRKCSH-217ENST00000592741 COPAP53621 1224 aa16.81■□□□□ 0.28
PRKCSH-217ENST00000592741 SLC34A1Q06495 639 aa16.81■□□□□ 0.28
PRKCSH-217ENST00000592741 NAA25Q14CX7 972 aa16.81■□□□□ 0.28
PRKCSH-217ENST00000592741 CMPK2Q5EBM0 449 aa16.81■□□□□ 0.28
PRKCSH-217ENST00000592741 ARTNQ5T4W7 220 aa16.81■□□□□ 0.28
PRKCSH-217ENST00000592741 C14orf80Q86SX3 495 aa16.81■□□□□ 0.28
PRKCSH-217ENST00000592741 SCYL1Q96KG9 808 aa16.81■□□□□ 0.28
PRKCSH-217ENST00000592741 C1QTNF1Q9BXJ1 281 aa16.81■□□□□ 0.28
PRKCSH-217ENST00000592741 CXorf56Q9H5V9 222 aa16.81■□□□□ 0.28
PRKCSH-217ENST00000592741 RGS18Q9NS28 235 aa16.81■□□□□ 0.28
PRKCSH-217ENST00000592741 TBC1D13Q9NVG8 400 aa16.81■□□□□ 0.28
PRKCSH-217ENST00000592741 MPP6Q9NZW5 540 aa16.81■□□□□ 0.28
PRKCSH-217ENST00000592741 CPSF2Q9P2I0 782 aaKnown RBP16.81■□□□□ 0.28
PRKCSH-217ENST00000592741 SCML2Q9UQR0 700 aa16.81■□□□□ 0.28
PRKCSH-217ENST00000592741 NYNRINQ9P2P1 1898 aaKnown RBP16.81■□□□□ 0.28
PRKCSH-217ENST00000592741 MEI4A8MW99 385 aa16.81■□□□□ 0.28
PRKCSH-217ENST00000592741 PHGDHO43175 533 aaKnown RBP16.81■□□□□ 0.28
PRKCSH-217ENST00000592741 PMPCBO75439 489 aa16.81■□□□□ 0.28
PRKCSH-217ENST00000592741 VAPBO95292 243 aa16.81■□□□□ 0.28
PRKCSH-217ENST00000592741 EOMESO95936 686 aa16.81■□□□□ 0.28
PRKCSH-217ENST00000592741 SLC2A3P11169 496 aa16.81■□□□□ 0.28
PRKCSH-217ENST00000592741 COL6A2P12110 1019 aa16.81■□□□□ 0.28
PRKCSH-217ENST00000592741 USP4Q13107 963 aa16.81■□□□□ 0.28
PRKCSH-217ENST00000592741 MUM1Q2TAK8 710 aa16.81■□□□□ 0.28
PRKCSH-217ENST00000592741 FSCBQ5H9T9 825 aa16.81■□□□□ 0.28
PRKCSH-217ENST00000592741 VWA5B1Q5TIE3 1220 aa16.81■□□□□ 0.28
PRKCSH-217ENST00000592741 MON1AQ86VX9 555 aa16.81■□□□□ 0.28
PRKCSH-217ENST00000592741 SLC41A1Q8IVJ1 513 aa16.81■□□□□ 0.28
PRKCSH-217ENST00000592741 NUP93Q8N1F7 819 aa16.81■□□□□ 0.28
PRKCSH-217ENST00000592741 ARHGAP18Q8N392 663 aa16.81■□□□□ 0.28
PRKCSH-217ENST00000592741 TDRD5Q8NAT2 981 aaKnown RBP16.81■□□□□ 0.28
PRKCSH-217ENST00000592741 C1orf74Q96LT6 269 aa16.81■□□□□ 0.28
PRKCSH-217ENST00000592741 GATA5Q9BWX5 397 aaPredicted RBP16.81■□□□□ 0.28
PRKCSH-217ENST00000592741 OXCT2Q9BYC2 517 aaPredicted RBP16.81■□□□□ 0.28
PRKCSH-217ENST00000592741 UBE2OQ9C0C9 1292 aaKnown RBP16.81■□□□□ 0.28
PRKCSH-217ENST00000592741 COG4Q9H9E3 785 aa16.81■□□□□ 0.28
PRKCSH-217ENST00000592741 STX18Q9P2W9 335 aaKnown RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms