RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 H0Y8X5 98 aa14.17□□□□□ -0.14
APOC1-208ENST00000592535 KPNA3O00505 521 aaPredicted RBP14.17□□□□□ -0.14
APOC1-208ENST00000592535 VILLO15195 856 aa14.17□□□□□ -0.14
APOC1-208ENST00000592535 LATO43561 262 aa14.17□□□□□ -0.14
APOC1-208ENST00000592535 CD160O95971 181 aa14.17□□□□□ -0.14
APOC1-208ENST00000592535 PRKCIP41743 596 aa14.17□□□□□ -0.14
APOC1-208ENST00000592535 CTSKP43235 329 aa14.17□□□□□ -0.14
APOC1-208ENST00000592535 TAS2R38P59533 333 aa14.17□□□□□ -0.14
APOC1-208ENST00000592535 FANCCQ00597 558 aa14.17□□□□□ -0.14
APOC1-208ENST00000592535 SLC20A2Q08357 652 aa14.17□□□□□ -0.14
APOC1-208ENST00000592535 EFHC2Q5JST6 749 aa14.17□□□□□ -0.14
APOC1-208ENST00000592535 PIP5KL1Q5T9C9 394 aa14.17□□□□□ -0.14
APOC1-208ENST00000592535 DPY19L3Q6ZPD9 716 aa14.17□□□□□ -0.14
APOC1-208ENST00000592535 TMIEQ8NEW7 156 aa14.17□□□□□ -0.14
APOC1-208ENST00000592535 GRIN3AQ8TCU5 1115 aa14.17□□□□□ -0.14
APOC1-208ENST00000592535 ARHGEF2Q92974 986 aaKnown RBP14.17□□□□□ -0.14
APOC1-208ENST00000592535 VCPIP1Q96JH7 1222 aa14.17□□□□□ -0.14
APOC1-208ENST00000592535 CEP44Q9C0F1 390 aa14.17□□□□□ -0.14
APOC1-208ENST00000592535 KDM4CQ9H3R0 1056 aa14.17□□□□□ -0.14
APOC1-208ENST00000592535 AASDHPPTQ9NRN7 309 aa14.17□□□□□ -0.14
APOC1-208ENST00000592535 FZD10Q9ULW2 581 aa14.17□□□□□ -0.14
APOC1-208ENST00000592535 A0A1W2PR77 199 aa14.16□□□□□ -0.14
APOC1-208ENST00000592535 DDX3XO00571 662 aaKnown RBP eCLIP14.16□□□□□ -0.141e-7■■■■■ 86.3
APOC1-208ENST00000592535 PRNPP04156 253 aa14.16□□□□□ -0.14
APOC1-208ENST00000592535 SKILP12757 684 aa14.16□□□□□ -0.14
APOC1-208ENST00000592535 MAT2AP31153 395 aaKnown RBP14.16□□□□□ -0.14
APOC1-208ENST00000592535 L1CAMP32004 1257 aa14.16□□□□□ -0.14
APOC1-208ENST00000592535 ETFBP38117 255 aa14.16□□□□□ -0.14
APOC1-208ENST00000592535 RECQLP46063 649 aaPredicted RBP14.16□□□□□ -0.14
APOC1-208ENST00000592535 DNA2P51530 1060 aa14.16□□□□□ -0.14
APOC1-208ENST00000592535 C21orf59P57076 290 aa14.16□□□□□ -0.14
APOC1-208ENST00000592535 TPM4P67936 248 aa14.16□□□□□ -0.14
APOC1-208ENST00000592535 KLHL30Q0D2K2 578 aa14.16□□□□□ -0.14
APOC1-208ENST00000592535 MAMLD1Q13495 774 aa14.16□□□□□ -0.14
APOC1-208ENST00000592535 HNRNPDQ14103 355 aaKnown RBP14.16□□□□□ -0.14
APOC1-208ENST00000592535 TRIP6Q15654 476 aaKnown RBP14.16□□□□□ -0.14
APOC1-208ENST00000592535 ZNF423Q2M1K9 1284 aa14.16□□□□□ -0.14
APOC1-208ENST00000592535 ARSIQ5FYB1 569 aa14.16□□□□□ -0.14
APOC1-208ENST00000592535 PLEKHA7Q6IQ23 1121 aa14.16□□□□□ -0.14
APOC1-208ENST00000592535 PPP1R2P3Q6NXS1 205 aa14.16□□□□□ -0.14
APOC1-208ENST00000592535 TMC6Q7Z403 805 aa14.16□□□□□ -0.14
APOC1-208ENST00000592535 PCDH20Q8N6Y1 951 aaKnown RBP14.16□□□□□ -0.14
APOC1-208ENST00000592535 SETD7Q8WTS6 366 aaKnown RBP14.16□□□□□ -0.14
APOC1-208ENST00000592535 SERAC1Q96JX3 654 aa14.16□□□□□ -0.14
APOC1-208ENST00000592535 EDEM3Q9BZQ6 932 aa14.16□□□□□ -0.14
APOC1-208ENST00000592535 MAGEH1Q9H213 219 aa14.16□□□□□ -0.14
APOC1-208ENST00000592535 RETREG1Q9H6L5 497 aa14.16□□□□□ -0.14
APOC1-208ENST00000592535 PARVAQ9NVD7 372 aa14.16□□□□□ -0.14
APOC1-208ENST00000592535 ARHGAP20Q9P2F6 1191 aa14.16□□□□□ -0.14
APOC1-208ENST00000592535 IL36AQ9UHA7 158 aa14.16□□□□□ -0.14
APOC1-208ENST00000592535 PCOLCE2Q9UKZ9 415 aa14.16□□□□□ -0.14
APOC1-208ENST00000592535 TPX2Q9ULW0 747 aaKnown RBP14.16□□□□□ -0.14
APOC1-208ENST00000592535 PCDHB9Q9Y5E1 797 aa14.16□□□□□ -0.14
APOC1-208ENST00000592535 PCDHGB2Q9Y5G2 931 aa14.16□□□□□ -0.14
APOC1-208ENST00000592535 WASF2Q9Y6W5 498 aa14.16□□□□□ -0.14
APOC1-208ENST00000592535 ACACBO00763 2458 aa14.15□□□□□ -0.14
APOC1-208ENST00000592535 CREB3O43889 395 aa14.15□□□□□ -0.14
APOC1-208ENST00000592535 RAMP2O60895 175 aa14.15□□□□□ -0.14
APOC1-208ENST00000592535 CBFA2T3O75081 653 aa14.15□□□□□ -0.14
APOC1-208ENST00000592535 LEFTY1O75610 366 aa14.15□□□□□ -0.14
APOC1-208ENST00000592535 FTLP02792 175 aaPredicted RBP14.15□□□□□ -0.14
APOC1-208ENST00000592535 PSMA2P25787 234 aa14.15□□□□□ -0.14
APOC1-208ENST00000592535 CD38P28907 300 aa14.15□□□□□ -0.14
APOC1-208ENST00000592535 EPHB2P29323 1055 aa14.15□□□□□ -0.14
APOC1-208ENST00000592535 CCT8P50990 548 aa14.15□□□□□ -0.14
APOC1-208ENST00000592535 CCNHP51946 323 aaPredicted RBP14.15□□□□□ -0.14
APOC1-208ENST00000592535 IL9RQ01113 521 aa14.15□□□□□ -0.14
APOC1-208ENST00000592535 CARD16Q5EG05 197 aa14.15□□□□□ -0.14
APOC1-208ENST00000592535 FIGNQ5HY92 759 aa14.15□□□□□ -0.14
APOC1-208ENST00000592535 PRAMEF14Q5SWL7 426 aa14.15□□□□□ -0.14
APOC1-208ENST00000592535 NAPEPLDQ6IQ20 393 aa14.15□□□□□ -0.14
APOC1-208ENST00000592535 LEKR1Q6ZMV7 388 aa14.15□□□□□ -0.14
APOC1-208ENST00000592535 DBX2Q6ZNG2 339 aa14.15□□□□□ -0.14
APOC1-208ENST00000592535 PRPF39Q86UA1 669 aaKnown RBP14.15□□□□□ -0.14
APOC1-208ENST00000592535 TRIM69Q86WT6 500 aa14.15□□□□□ -0.14
APOC1-208ENST00000592535 RTL3Q8N8U3 475 aaKnown RBP14.15□□□□□ -0.14
APOC1-208ENST00000592535 SCNM1Q9BWG6 230 aa14.15□□□□□ -0.14
APOC1-208ENST00000592535 TM6SF2Q9BZW4 377 aa14.15□□□□□ -0.14
APOC1-208ENST00000592535 NOL6Q9H6R4 1146 aaKnown RBP14.15□□□□□ -0.14
APOC1-208ENST00000592535 PREBQ9HCU5 417 aa14.15□□□□□ -0.14
APOC1-208ENST00000592535 DYRK4Q9NR20 520 aa14.15□□□□□ -0.14
APOC1-208ENST00000592535 GPATCH2LQ9NWQ4 482 aa14.15□□□□□ -0.14
APOC1-208ENST00000592535 BTBD3Q9Y2F9 522 aa14.15□□□□□ -0.14
APOC1-208ENST00000592535 TRPM6Q9BX84 2022 aa14.14□□□□□ -0.15
APOC1-208ENST00000592535 CXorf51AA0A1B0GTR3 108 aa14.14□□□□□ -0.15
APOC1-208ENST00000592535 FLRT2O43155 660 aa14.14□□□□□ -0.15
APOC1-208ENST00000592535 HYAL3O43820 417 aaPredicted RBP14.14□□□□□ -0.15
APOC1-208ENST00000592535 RNGTTO60942 597 aaKnown RBP14.14□□□□□ -0.15
APOC1-208ENST00000592535 GZMAP12544 262 aa14.14□□□□□ -0.15
APOC1-208ENST00000592535 DESP17661 470 aa14.14□□□□□ -0.15
APOC1-208ENST00000592535 PBX1P40424 430 aa14.14□□□□□ -0.15
APOC1-208ENST00000592535 AIF1P55008 147 aa14.14□□□□□ -0.15
APOC1-208ENST00000592535 UBASH3AP57075 661 aa14.14□□□□□ -0.15
APOC1-208ENST00000592535 POLD3Q15054 466 aaPredicted RBP14.14□□□□□ -0.15
APOC1-208ENST00000592535 ERN2Q76MJ5 926 aaKnown RBP14.14□□□□□ -0.15
APOC1-208ENST00000592535 BAHD1Q8TBE0 780 aaPredicted RBP14.14□□□□□ -0.15
APOC1-208ENST00000592535 SKA1Q96BD8 255 aa14.14□□□□□ -0.15
APOC1-208ENST00000592535 EPAS1Q99814 870 aa14.14□□□□□ -0.15
APOC1-208ENST00000592535 HEPHQ9BQS7 1158 aa14.14□□□□□ -0.15
APOC1-208ENST00000592535 TRIM7Q9C029 511 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms