RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 ENTPD7Q9NQZ7 604 aa16■□□□□ 0.15
MBD1-227ENST00000592060 PPARGC1AQ9UBK2 798 aaKnown RBP16■□□□□ 0.15
MBD1-227ENST00000592060 IPO11Q9UI26 975 aaKnown RBP16■□□□□ 0.15
MBD1-227ENST00000592060 DNAJC16Q9Y2G8 782 aa16■□□□□ 0.15
MBD1-227ENST00000592060 HTTP42858 3142 aa16■□□□□ 0.15
MBD1-227ENST00000592060 IGLV3-10A0A075B6K4 115 aa16■□□□□ 0.15
MBD1-227ENST00000592060 CCDC78A2IDD5 438 aa16■□□□□ 0.15
MBD1-227ENST00000592060 GOLGA8TH3BQL2 631 aa16■□□□□ 0.15
MBD1-227ENST00000592060 C2P06681 752 aa16■□□□□ 0.15
MBD1-227ENST00000592060 RHOQP17081 205 aa16■□□□□ 0.15
MBD1-227ENST00000592060 CCND1P24385 295 aa16■□□□□ 0.15
MBD1-227ENST00000592060 GRK2P25098 689 aa16■□□□□ 0.15
MBD1-227ENST00000592060 ARNTP27540 789 aa16■□□□□ 0.15
MBD1-227ENST00000592060 GATMP50440 423 aa16■□□□□ 0.15
MBD1-227ENST00000592060 CDK7P50613 346 aa16■□□□□ 0.15
MBD1-227ENST00000592060 NDST2P52849 883 aa16■□□□□ 0.15
MBD1-227ENST00000592060 TUBB3Q13509 450 aa16■□□□□ 0.15
MBD1-227ENST00000592060 GRM3Q14832 879 aa16■□□□□ 0.15
MBD1-227ENST00000592060 POU6F1Q14863 301 aa16■□□□□ 0.15
MBD1-227ENST00000592060 TRIP4Q15650 581 aaPredicted RBP16■□□□□ 0.15
MBD1-227ENST00000592060 PIWIL2Q8TC59 973 aaKnown RBP16■□□□□ 0.15
MBD1-227ENST00000592060 PTCD2Q8WV60 388 aaKnown RBP16■□□□□ 0.15
MBD1-227ENST00000592060 B3GALT6Q96L58 329 aa16■□□□□ 0.15
MBD1-227ENST00000592060 BTBD10Q9BSF8 475 aa16■□□□□ 0.15
MBD1-227ENST00000592060 CADM1Q9BY67 442 aaKnown RBP16■□□□□ 0.15
MBD1-227ENST00000592060 RHOJQ9H4E5 214 aa16■□□□□ 0.15
MBD1-227ENST00000592060 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16■□□□□ 0.15
MBD1-227ENST00000592060 TMEM248Q9NWD8 314 aa16■□□□□ 0.15
MBD1-227ENST00000592060 CLIC5Q9NZA1 410 aa16■□□□□ 0.15
MBD1-227ENST00000592060 ARMCX1Q9P291 453 aa16■□□□□ 0.15
MBD1-227ENST00000592060 RPL26L1Q9UNX3 145 aaKnown RBP16■□□□□ 0.15
MBD1-227ENST00000592060 TCAF1Q9Y4C2 921 aa16■□□□□ 0.15
MBD1-227ENST00000592060 MTMR11A4FU01 709 aa15.99■□□□□ 0.15
MBD1-227ENST00000592060 G3V2L1 256 aa15.99■□□□□ 0.15
MBD1-227ENST00000592060 ENPP3O14638 875 aa15.99■□□□□ 0.15
MBD1-227ENST00000592060 SOAT2O75908 522 aa15.99■□□□□ 0.15
MBD1-227ENST00000592060 RALBP11234 206 aa15.99■□□□□ 0.15
MBD1-227ENST00000592060 CPA3P15088 417 aa15.99■□□□□ 0.15
MBD1-227ENST00000592060 YWHAQP27348 245 aa15.99■□□□□ 0.15
MBD1-227ENST00000592060 GABRB3P28472 473 aa15.99■□□□□ 0.15
MBD1-227ENST00000592060 HADHAP40939 763 aa15.99■□□□□ 0.15
MBD1-227ENST00000592060 ARCN1P48444 511 aaKnown RBP15.99■□□□□ 0.15
MBD1-227ENST00000592060 HARS2P49590 506 aaKnown RBP15.99■□□□□ 0.15
MBD1-227ENST00000592060 EFEMP1Q12805 493 aa15.99■□□□□ 0.15
MBD1-227ENST00000592060 E2F5Q15329 346 aa15.99■□□□□ 0.15
MBD1-227ENST00000592060 ANO4Q32M45 955 aa15.99■□□□□ 0.15
MBD1-227ENST00000592060 COL13A1Q5TAT6 717 aaPredicted RBP15.99■□□□□ 0.15
MBD1-227ENST00000592060 POTEHQ6S545 545 aa15.99■□□□□ 0.15
MBD1-227ENST00000592060 KDELC1Q6UW63 502 aa15.99■□□□□ 0.15
MBD1-227ENST00000592060 RANBP10Q6VN20 620 aa15.99■□□□□ 0.15
MBD1-227ENST00000592060 RINLQ6ZS11 566 aa15.99■□□□□ 0.15
MBD1-227ENST00000592060 CEP57Q86XR8 500 aa15.99■□□□□ 0.15
MBD1-227ENST00000592060 TREML1Q86YW5 311 aa15.99■□□□□ 0.15
MBD1-227ENST00000592060 PPHLN1Q8NEY8 458 aaKnown RBP15.99■□□□□ 0.15
MBD1-227ENST00000592060 GPR152Q8TDT2 470 aa15.99■□□□□ 0.15
MBD1-227ENST00000592060 FBXO32Q969P5 355 aa15.99■□□□□ 0.15
MBD1-227ENST00000592060 CAPNS2Q96L46 248 aa15.99■□□□□ 0.15
MBD1-227ENST00000592060 EBF4Q9BQW3 602 aa15.99■□□□□ 0.15
MBD1-227ENST00000592060 ZYG11BQ9C0D3 744 aa15.99■□□□□ 0.15
MBD1-227ENST00000592060 CRISPLD1Q9H336 500 aa15.99■□□□□ 0.15
MBD1-227ENST00000592060 STN1Q9H668 368 aaKnown RBP15.99■□□□□ 0.15
MBD1-227ENST00000592060 PHF24Q9UPV7 400 aa15.99■□□□□ 0.15
MBD1-227ENST00000592060 TBC1D4O60343 1298 aa15.98■□□□□ 0.15
MBD1-227ENST00000592060 SIN3BO75182 1162 aa15.98■□□□□ 0.15
MBD1-227ENST00000592060 PMPCBO75439 489 aa15.98■□□□□ 0.15
MBD1-227ENST00000592060 RTN3O95197 1032 aaPredicted RBP15.98■□□□□ 0.15
MBD1-227ENST00000592060 IGLV3-27P01718 113 aa15.98■□□□□ 0.15
MBD1-227ENST00000592060 ALOX15P16050 662 aaPredicted RBP15.98■□□□□ 0.15
MBD1-227ENST00000592060 SLC11A1P49279 550 aa15.98■□□□□ 0.15
MBD1-227ENST00000592060 ABCE1P61221 599 aaKnown RBP15.98■□□□□ 0.15
MBD1-227ENST00000592060 PSMD5Q16401 504 aa15.98■□□□□ 0.15
MBD1-227ENST00000592060 ALFQ53S48 1182 aa15.98■□□□□ 0.15
MBD1-227ENST00000592060 RSPO2Q6UXX9 243 aaPredicted RBP15.98■□□□□ 0.15
MBD1-227ENST00000592060 MAVSQ7Z434 540 aa15.98■□□□□ 0.15
MBD1-227ENST00000592060 REM2Q8IYK8 340 aaPredicted RBP15.98■□□□□ 0.15
MBD1-227ENST00000592060 ATP6V0D2Q8N8Y2 350 aa15.98■□□□□ 0.15
MBD1-227ENST00000592060 HMCESQ96FZ2 354 aa15.98■□□□□ 0.15
MBD1-227ENST00000592060 CCDC106Q9BWC9 280 aa15.98■□□□□ 0.15
MBD1-227ENST00000592060 C1QTNF1Q9BXJ1 281 aa15.98■□□□□ 0.15
MBD1-227ENST00000592060 SLC25A51Q9H1U9 297 aa15.98■□□□□ 0.15
MBD1-227ENST00000592060 TREX1Q9NSU2 369 aa15.98■□□□□ 0.15
MBD1-227ENST00000592060 HCSTQ9UBK5 93 aa15.98■□□□□ 0.15
MBD1-227ENST00000592060 ZNF212Q9UDV6 495 aa15.98■□□□□ 0.15
MBD1-227ENST00000592060 L3MBTL1Q9Y468 752 aa15.98■□□□□ 0.15
MBD1-227ENST00000592060 PEX11AO75192 247 aa15.98■□□□□ 0.15
MBD1-227ENST00000592060 CNTN5O94779 1100 aa15.98■□□□□ 0.15
MBD1-227ENST00000592060 TBX18O95935 607 aa15.98■□□□□ 0.15
MBD1-227ENST00000592060 GM2AP17900 193 aa15.98■□□□□ 0.15
MBD1-227ENST00000592060 ITGA9Q13797 1035 aa15.98■□□□□ 0.15
MBD1-227ENST00000592060 TCTN1Q2MV58 587 aa15.98■□□□□ 0.15
MBD1-227ENST00000592060 WASHC2DQ5SRD0 308 aa15.98■□□□□ 0.15
MBD1-227ENST00000592060 ESRP1Q6NXG1 681 aaKnown RBP15.98■□□□□ 0.15
MBD1-227ENST00000592060 TFAP2DQ7Z6R9 452 aa15.98■□□□□ 0.15
MBD1-227ENST00000592060 WDR75Q8IWA0 830 aaKnown RBP15.98■□□□□ 0.15
MBD1-227ENST00000592060 ABI1Q8IZP0 508 aa15.98■□□□□ 0.15
MBD1-227ENST00000592060 DBF4BQ8NFT6 615 aa15.98■□□□□ 0.15
MBD1-227ENST00000592060 BTN2A3PQ96KV6 586 aa15.98■□□□□ 0.15
MBD1-227ENST00000592060 EBF2Q9HAK2 575 aa15.98■□□□□ 0.15
MBD1-227ENST00000592060 ATP13A1Q9HD20 1204 aa15.98■□□□□ 0.15
MBD1-227ENST00000592060 CREBZFQ9NS37 354 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms