RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 CATSPERBQ9H7T0 1116 aa14.23□□□□□ -0.13
CLIP3-205ENST00000592017 ZWILCHQ9H900 591 aa14.23□□□□□ -0.13
CLIP3-205ENST00000592017 NHEJ1Q9H9Q4 299 aaPredicted RBP14.23□□□□□ -0.13
CLIP3-205ENST00000592017 SGK2Q9HBY8 427 aa14.23□□□□□ -0.13
CLIP3-205ENST00000592017 CTTNBP2NLQ9P2B4 639 aa14.23□□□□□ -0.13
CLIP3-205ENST00000592017 NENFQ9UMX5 172 aa14.23□□□□□ -0.13
CLIP3-205ENST00000592017 WASF3Q9UPY6 502 aa14.23□□□□□ -0.13
CLIP3-205ENST00000592017 HS3ST2Q9Y278 367 aa14.23□□□□□ -0.13
CLIP3-205ENST00000592017 NCKAP1Q9Y2A7 1128 aa14.23□□□□□ -0.13
CLIP3-205ENST00000592017 ACTL7AQ9Y615 435 aa14.23□□□□□ -0.13
CLIP3-205ENST00000592017 SPAARA0A1B0GVQ0 90 aa14.22□□□□□ -0.13
CLIP3-205ENST00000592017 A0A1W2PP55 124 aa14.22□□□□□ -0.13
CLIP3-205ENST00000592017 FAM47DPA6NHR8 397 aa14.22□□□□□ -0.13
CLIP3-205ENST00000592017 C10orf142B7Z368 130 aa14.22□□□□□ -0.13
CLIP3-205ENST00000592017 DAPK3O43293 454 aa14.22□□□□□ -0.13
CLIP3-205ENST00000592017 RNASEH2AO75792 299 aaKnown RBP14.22□□□□□ -0.13
CLIP3-205ENST00000592017 TOP3BO95985 862 aaKnown RBP14.22□□□□□ -0.13
CLIP3-205ENST00000592017 IGHV4-34P06331 123 aa14.22□□□□□ -0.13
CLIP3-205ENST00000592017 TCF4P15884 667 aa14.22□□□□□ -0.13
CLIP3-205ENST00000592017 GJC1P36383 396 aa14.22□□□□□ -0.13
CLIP3-205ENST00000592017 PI4KAP42356 2102 aa14.22□□□□□ -0.13
CLIP3-205ENST00000592017 VASPP50552 380 aaPredicted RBP14.22□□□□□ -0.13
CLIP3-205ENST00000592017 FAM193AP78312 1265 aa14.22□□□□□ -0.13
CLIP3-205ENST00000592017 ARF5P84085 180 aa14.22□□□□□ -0.13
CLIP3-205ENST00000592017 TBX2Q13207 712 aaPredicted RBP14.22□□□□□ -0.13
CLIP3-205ENST00000592017 PIGHQ14442 188 aaPredicted RBP14.22□□□□□ -0.13
CLIP3-205ENST00000592017 POLD3Q15054 466 aaPredicted RBP14.22□□□□□ -0.13
CLIP3-205ENST00000592017 ASTE1Q2TB18 679 aaPredicted RBP14.22□□□□□ -0.13
CLIP3-205ENST00000592017 POM121L1PQ3SYA9 428 aa14.22□□□□□ -0.13
CLIP3-205ENST00000592017 KCNT1Q5JUK3 1230 aa14.22□□□□□ -0.13
CLIP3-205ENST00000592017 C22orf39Q6P5X5 142 aa14.22□□□□□ -0.13
CLIP3-205ENST00000592017 LEKR1Q6ZMV7 388 aa14.22□□□□□ -0.13
CLIP3-205ENST00000592017 CYP4V2Q6ZWL3 525 aaPredicted RBP14.22□□□□□ -0.13
CLIP3-205ENST00000592017 USP30Q70CQ3 517 aa14.22□□□□□ -0.13
CLIP3-205ENST00000592017 AADATQ8N5Z0 425 aa14.22□□□□□ -0.13
CLIP3-205ENST00000592017 HSPH1Q92598 858 aa14.22□□□□□ -0.13
CLIP3-205ENST00000592017 ARHGEF2Q92974 986 aaKnown RBP14.22□□□□□ -0.13
CLIP3-205ENST00000592017 CCDC114Q96M63 670 aa14.22□□□□□ -0.13
CLIP3-205ENST00000592017 CAMK1GQ96NX5 476 aa14.22□□□□□ -0.13
CLIP3-205ENST00000592017 KCTD15Q96SI1 283 aaPredicted RBP14.22□□□□□ -0.13
CLIP3-205ENST00000592017 OMDQ99983 421 aa14.22□□□□□ -0.13
CLIP3-205ENST00000592017 NCAPGQ9BPX3 1015 aa14.22□□□□□ -0.13
CLIP3-205ENST00000592017 ZDHHC5Q9C0B5 715 aa14.22□□□□□ -0.13
CLIP3-205ENST00000592017 TNKS2Q9H2K2 1166 aa14.22□□□□□ -0.13
CLIP3-205ENST00000592017 IL21RQ9HBE5 538 aa14.22□□□□□ -0.13
CLIP3-205ENST00000592017 IP6K2Q9UHH9 426 aa14.22□□□□□ -0.13
CLIP3-205ENST00000592017 ANGPTL2Q9UKU9 493 aa14.22□□□□□ -0.13
CLIP3-205ENST00000592017 HPCAL4Q9UM19 191 aa14.22□□□□□ -0.13
CLIP3-205ENST00000592017 SCML1Q9UN30 329 aa14.22□□□□□ -0.13
CLIP3-205ENST00000592017 KNL1Q8NG31 2342 aa14.21□□□□□ -0.13
CLIP3-205ENST00000592017 A0A1B0GVT2 93 aa14.21□□□□□ -0.13
CLIP3-205ENST00000592017 MYO1FO00160 1098 aa14.21□□□□□ -0.13
CLIP3-205ENST00000592017 FGF10O15520 208 aaPredicted RBP14.21□□□□□ -0.13
CLIP3-205ENST00000592017 SMAD6O43541 496 aaKnown RBP14.21□□□□□ -0.13
CLIP3-205ENST00000592017 SH3BP5O60239 455 aa14.21□□□□□ -0.13
CLIP3-205ENST00000592017 FSBPO95073 299 aa14.21□□□□□ -0.13
CLIP3-205ENST00000592017 ADH1BP00325 375 aa14.21□□□□□ -0.13
CLIP3-205ENST00000592017 H2AFZP0C0S5 128 aa14.21□□□□□ -0.13
CLIP3-205ENST00000592017 CD27P26842 260 aa14.21□□□□□ -0.13
CLIP3-205ENST00000592017 PCK1P35558 622 aa14.21□□□□□ -0.13
CLIP3-205ENST00000592017 CSNK1EP49674 416 aaKnown RBP14.21□□□□□ -0.13
CLIP3-205ENST00000592017 SERPINH1P50454 418 aaKnown RBP14.21□□□□□ -0.13
CLIP3-205ENST00000592017 DNA2P51530 1060 aa14.21□□□□□ -0.13
CLIP3-205ENST00000592017 CLCN6P51797 869 aa14.21□□□□□ -0.13
CLIP3-205ENST00000592017 METAP1P53582 386 aa14.21□□□□□ -0.13
CLIP3-205ENST00000592017 ACAP1Q15027 740 aa14.21□□□□□ -0.13
CLIP3-205ENST00000592017 KIAA0895LQ68EN5 471 aa14.21□□□□□ -0.13
CLIP3-205ENST00000592017 H2AFVQ71UI9 128 aa14.21□□□□□ -0.13
CLIP3-205ENST00000592017 DSG4Q86SJ6 1040 aa14.21□□□□□ -0.13
CLIP3-205ENST00000592017 HMCESQ96FZ2 354 aa14.21□□□□□ -0.13
CLIP3-205ENST00000592017 ACE2Q9BYF1 805 aaPredicted RBP14.21□□□□□ -0.13
CLIP3-205ENST00000592017 MAGEH1Q9H213 219 aa14.21□□□□□ -0.13
CLIP3-205ENST00000592017 SLC32A1Q9H598 525 aa14.21□□□□□ -0.13
CLIP3-205ENST00000592017 RETREG1Q9H6L5 497 aa14.21□□□□□ -0.13
CLIP3-205ENST00000592017 TM9SF3Q9HD45 589 aa14.21□□□□□ -0.13
CLIP3-205ENST00000592017 FCF1Q9Y324 198 aaKnown RBP14.21□□□□□ -0.13
CLIP3-205ENST00000592017 FARP1Q9Y4F1 1045 aaPredicted RBP14.21□□□□□ -0.13
CLIP3-205ENST00000592017 PCDH15Q96QU1 1955 aa14.21□□□□□ -0.13
CLIP3-205ENST00000592017 NUMA1Q14980 2115 aa14.21□□□□□ -0.13
CLIP3-205ENST00000592017 TMEM110-MUSTN1A8MSY1 372 aa14.2□□□□□ -0.14
CLIP3-205ENST00000592017 C1QTNF3-AMACRE9PGA6 284 aa14.2□□□□□ -0.14
CLIP3-205ENST00000592017 PLK4O00444 970 aa14.2□□□□□ -0.14
CLIP3-205ENST00000592017 ZMPSTE24O75844 475 aa14.2□□□□□ -0.14
CLIP3-205ENST00000592017 TMEM253P0C7T8 217 aa14.2□□□□□ -0.14
CLIP3-205ENST00000592017 GOT1P17174 413 aa14.2□□□□□ -0.14
CLIP3-205ENST00000592017 C5AR1P21730 350 aa14.2□□□□□ -0.14
CLIP3-205ENST00000592017 IL1R2P27930 398 aa14.2□□□□□ -0.14
CLIP3-205ENST00000592017 HTR7P34969 479 aa14.2□□□□□ -0.14
CLIP3-205ENST00000592017 RECQLP46063 649 aaPredicted RBP14.2□□□□□ -0.14
CLIP3-205ENST00000592017 AFF3P51826 1226 aaKnown RBP14.2□□□□□ -0.14
CLIP3-205ENST00000592017 SFSWAPQ12872 951 aaKnown RBP14.2□□□□□ -0.14
CLIP3-205ENST00000592017 FOXC1Q12948 553 aa14.2□□□□□ -0.14
CLIP3-205ENST00000592017 SLC14A1Q13336 389 aa14.2□□□□□ -0.14
CLIP3-205ENST00000592017 KIF19Q2TAC6 998 aa14.2□□□□□ -0.14
CLIP3-205ENST00000592017 HLA-BQ31612 363 aa14.2□□□□□ -0.14
CLIP3-205ENST00000592017 NCEH1Q6PIU2 408 aa14.2□□□□□ -0.14
CLIP3-205ENST00000592017 LAYNQ6UX15 382 aa14.2□□□□□ -0.14
CLIP3-205ENST00000592017 RFX8Q6ZV50 586 aa14.2□□□□□ -0.14
CLIP3-205ENST00000592017 NIPA2Q8N8Q9 360 aa14.2□□□□□ -0.14
CLIP3-205ENST00000592017 TC2NQ8N9U0 490 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms