RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 ASCC3Q8N3C0 2202 aaKnown RBP11.75□□□□□ -0.53
VMP1-211ENST00000591315 FAM47DPA6NHR8 397 aa11.75□□□□□ -0.53
VMP1-211ENST00000591315 MCF2LO15068 1137 aa11.75□□□□□ -0.53
VMP1-211ENST00000591315 FGF10O15520 208 aaPredicted RBP11.75□□□□□ -0.53
VMP1-211ENST00000591315 DAPK3O43293 454 aa11.75□□□□□ -0.53
VMP1-211ENST00000591315 BUB1O43683 1085 aa11.75□□□□□ -0.53
VMP1-211ENST00000591315 NDUFS2O75306 463 aa11.75□□□□□ -0.53
VMP1-211ENST00000591315 RNASEH2AO75792 299 aaKnown RBP11.75□□□□□ -0.53
VMP1-211ENST00000591315 MTA2O94776 668 aa11.75□□□□□ -0.53
VMP1-211ENST00000591315 LCA5LO95447 670 aa11.75□□□□□ -0.53
VMP1-211ENST00000591315 DNTTP04053 509 aa11.75□□□□□ -0.53
VMP1-211ENST00000591315 DRD3P35462 400 aa11.75□□□□□ -0.53
VMP1-211ENST00000591315 PAPOLAP51003 745 aaKnown RBP11.75□□□□□ -0.53
VMP1-211ENST00000591315 ZNF33AQ06730 810 aa11.75□□□□□ -0.53
VMP1-211ENST00000591315 CNTN1Q12860 1018 aa11.75□□□□□ -0.53
VMP1-211ENST00000591315 SERINC3Q13530 473 aa11.75□□□□□ -0.53
VMP1-211ENST00000591315 ELAVL3Q14576 367 aaKnown RBP11.75□□□□□ -0.53
VMP1-211ENST00000591315 ARSIQ5FYB1 569 aa11.75□□□□□ -0.53
VMP1-211ENST00000591315 FAM182AQ5T1J6 154 aa11.75□□□□□ -0.53
VMP1-211ENST00000591315 LYSMD4Q5XG99 296 aa11.75□□□□□ -0.53
VMP1-211ENST00000591315 AFMIDQ63HM1 303 aa11.75□□□□□ -0.53
VMP1-211ENST00000591315 RETSATQ6NUM9 610 aa11.75□□□□□ -0.53
VMP1-211ENST00000591315 SLC36A4Q6YBV0 504 aa11.75□□□□□ -0.53
VMP1-211ENST00000591315 CYP2U1Q7Z449 544 aa11.75□□□□□ -0.53
VMP1-211ENST00000591315 PSTKQ8IV42 348 aaKnown RBP11.75□□□□□ -0.53
VMP1-211ENST00000591315 HDDC3Q8N4P3 179 aa11.75□□□□□ -0.53
VMP1-211ENST00000591315 ACRBPQ8NEB7 543 aa11.75□□□□□ -0.53
VMP1-211ENST00000591315 PIP4K2CQ8TBX8 421 aa11.75□□□□□ -0.53
VMP1-211ENST00000591315 GRIN3AQ8TCU5 1115 aa11.75□□□□□ -0.53
VMP1-211ENST00000591315 TEKT4Q8WW24 435 aa11.75□□□□□ -0.53
VMP1-211ENST00000591315 OR8D1Q8WZ84 308 aa11.75□□□□□ -0.53
VMP1-211ENST00000591315 RAPGEF5Q92565 580 aa11.75□□□□□ -0.53
VMP1-211ENST00000591315 ARRDC3Q96B67 414 aa11.75□□□□□ -0.53
VMP1-211ENST00000591315 ZNF419Q96HQ0 510 aaPredicted RBP11.75□□□□□ -0.53
VMP1-211ENST00000591315 CSPG4P5Q96PW8 444 aa11.75□□□□□ -0.53
VMP1-211ENST00000591315 FBRSQ9HAH7 460 aa11.75□□□□□ -0.53
VMP1-211ENST00000591315 PPM1HQ9ULR3 514 aa11.75□□□□□ -0.53
VMP1-211ENST00000591315 EPN1Q9Y6I3 576 aaPredicted RBP11.75□□□□□ -0.53
VMP1-211ENST00000591315 WASF2Q9Y6W5 498 aa11.75□□□□□ -0.53
VMP1-211ENST00000591315 H3BRJ5 948 aa11.74□□□□□ -0.53
VMP1-211ENST00000591315 DFFAO00273 331 aa11.74□□□□□ -0.53
VMP1-211ENST00000591315 INSIG1O15503 277 aa11.74□□□□□ -0.53
VMP1-211ENST00000591315 TMCC1O94876 653 aa11.74□□□□□ -0.53
VMP1-211ENST00000591315 NDUFA10O95299 355 aa11.74□□□□□ -0.53
VMP1-211ENST00000591315 SEMA4FO95754 770 aa11.74□□□□□ -0.53
VMP1-211ENST00000591315 TNNT1P13805 278 aa11.74□□□□□ -0.53
VMP1-211ENST00000591315 CDC25BP30305 580 aa11.74□□□□□ -0.53
VMP1-211ENST00000591315 CHRNA3P32297 505 aa11.74□□□□□ -0.53
VMP1-211ENST00000591315 CDH6P55285 790 aa11.74□□□□□ -0.53
VMP1-211ENST00000591315 KRT81Q14533 505 aa11.74□□□□□ -0.53
VMP1-211ENST00000591315 CYTH1Q15438 398 aa11.74□□□□□ -0.53
VMP1-211ENST00000591315 CSRP2Q16527 193 aa11.74□□□□□ -0.53
VMP1-211ENST00000591315 DCAF12L1Q5VU92 463 aa11.74□□□□□ -0.53
VMP1-211ENST00000591315 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.74□□□□□ -0.53
VMP1-211ENST00000591315 C11orf74Q86VG3 221 aa11.74□□□□□ -0.53
VMP1-211ENST00000591315 LRRN4Q8WUT4 740 aa11.74□□□□□ -0.53
VMP1-211ENST00000591315 RFFLQ8WZ73 363 aa11.74□□□□□ -0.53
VMP1-211ENST00000591315 EXOC2Q96KP1 924 aa11.74□□□□□ -0.53
VMP1-211ENST00000591315 RETREG1Q9H6L5 497 aa11.74□□□□□ -0.53
VMP1-211ENST00000591315 PDFQ9HBH1 243 aa11.74□□□□□ -0.53
VMP1-211ENST00000591315 PILRBQ9UKJ0 227 aa11.74□□□□□ -0.53
VMP1-211ENST00000591315 DUSP10Q9Y6W6 482 aa11.74□□□□□ -0.53
VMP1-211ENST00000591315 DNAH14Q0VDD8 3507 aa11.73□□□□□ -0.53
VMP1-211ENST00000591315 METTL12A8MUP2 240 aa11.73□□□□□ -0.53
VMP1-211ENST00000591315 EIF3CLB5ME19 914 aaKnown RBP11.73□□□□□ -0.53
VMP1-211ENST00000591315 BUB1BO60566 1050 aaPredicted RBP11.73□□□□□ -0.53
VMP1-211ENST00000591315 PRAMEF11O60813 436 aa11.73□□□□□ -0.53
VMP1-211ENST00000591315 RNASEH1O60930 286 aaKnown RBP11.73□□□□□ -0.53
VMP1-211ENST00000591315 LEFTY1O75610 366 aa11.73□□□□□ -0.53
VMP1-211ENST00000591315 GJB3O75712 270 aa11.73□□□□□ -0.53
VMP1-211ENST00000591315 MAP3K6O95382 1288 aa11.73□□□□□ -0.53
VMP1-211ENST00000591315 ZNF806P0C7X5 589 aa11.73□□□□□ -0.53
VMP1-211ENST00000591315 C5AR1P21730 350 aa11.73□□□□□ -0.53
VMP1-211ENST00000591315 COMTP21964 271 aa11.73□□□□□ -0.53
VMP1-211ENST00000591315 OXTRP30559 389 aa11.73□□□□□ -0.53
VMP1-211ENST00000591315 MAN1A1P33908 653 aa11.73□□□□□ -0.53
VMP1-211ENST00000591315 HTR7P34969 479 aa11.73□□□□□ -0.53
VMP1-211ENST00000591315 ETFBP38117 255 aa11.73□□□□□ -0.53
VMP1-211ENST00000591315 ARL4AP40617 200 aa11.73□□□□□ -0.53
VMP1-211ENST00000591315 HCAR3P49019 387 aa11.73□□□□□ -0.53
VMP1-211ENST00000591315 CLCN6P51797 869 aa11.73□□□□□ -0.53
VMP1-211ENST00000591315 CCNHP51946 323 aaPredicted RBP11.73□□□□□ -0.53
VMP1-211ENST00000591315 NDST2P52849 883 aa11.73□□□□□ -0.53
VMP1-211ENST00000591315 YBEYP58557 167 aaPredicted RBP11.73□□□□□ -0.53
VMP1-211ENST00000591315 IRX4P78413 519 aa11.73□□□□□ -0.53
VMP1-211ENST00000591315 ZBTB16Q05516 673 aa11.73□□□□□ -0.53
VMP1-211ENST00000591315 SLC20A2Q08357 652 aa11.73□□□□□ -0.53
VMP1-211ENST00000591315 DPYSL3Q14195 570 aa11.73□□□□□ -0.53
VMP1-211ENST00000591315 PARP15Q460N3 678 aa11.73□□□□□ -0.53
VMP1-211ENST00000591315 TTC31Q49AM3 519 aaPredicted RBP11.73□□□□□ -0.53
VMP1-211ENST00000591315 CARD16Q5EG05 197 aa11.73□□□□□ -0.53
VMP1-211ENST00000591315 NCEH1Q6PIU2 408 aa11.73□□□□□ -0.53
VMP1-211ENST00000591315 PRR23CQ6ZRP0 262 aa11.73□□□□□ -0.53
VMP1-211ENST00000591315 TMTC1Q8IUR5 882 aa11.73□□□□□ -0.53
VMP1-211ENST00000591315 CCDC170Q8IYT3 715 aa11.73□□□□□ -0.53
VMP1-211ENST00000591315 RYBPQ8N488 228 aaPredicted RBP11.73□□□□□ -0.53
VMP1-211ENST00000591315 PCDH20Q8N6Y1 951 aaKnown RBP11.73□□□□□ -0.53
VMP1-211ENST00000591315 PCDH19Q8TAB3 1148 aa11.73□□□□□ -0.53
VMP1-211ENST00000591315 FAM71BQ8TC56 605 aa11.73□□□□□ -0.53
VMP1-211ENST00000591315 SNX19Q92543 992 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms