RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 PPP1R9BQ96SB3 815 aa11.49□□□□□ -0.57
SMAD4-211ENST00000590499 FAM129BQ96TA1 746 aa11.49□□□□□ -0.57
SMAD4-211ENST00000590499 CNPY3Q9BT09 278 aa11.49□□□□□ -0.57
SMAD4-211ENST00000590499 ZYG11BQ9C0D3 744 aa11.49□□□□□ -0.57
SMAD4-211ENST00000590499 ISCUQ9H1K1 167 aa11.49□□□□□ -0.57
SMAD4-211ENST00000590499 PARVAQ9NVD7 372 aa11.49□□□□□ -0.57
SMAD4-211ENST00000590499 OR12D3Q9UGF7 316 aa11.49□□□□□ -0.57
SMAD4-211ENST00000590499 EVLQ9UI08 416 aaPredicted RBP11.49□□□□□ -0.57
SMAD4-211ENST00000590499 VPS28Q9UK41 221 aa11.49□□□□□ -0.57
SMAD4-211ENST00000590499 HS3ST2Q9Y278 367 aa11.49□□□□□ -0.57
SMAD4-211ENST00000590499 ADAMTS9Q9P2N4 1935 aa11.48□□□□□ -0.57
SMAD4-211ENST00000590499 A0A0D9SEW6 157 aa11.48□□□□□ -0.57
SMAD4-211ENST00000590499 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.48□□□□□ -0.57
SMAD4-211ENST00000590499 LNP1A1A4G5 178 aa11.48□□□□□ -0.57
SMAD4-211ENST00000590499 ILVBLA1L0T0 632 aa11.48□□□□□ -0.57
SMAD4-211ENST00000590499 TMEM191CA6NGB0 347 aa11.48□□□□□ -0.57
SMAD4-211ENST00000590499 C10orf142B7Z368 130 aa11.48□□□□□ -0.57
SMAD4-211ENST00000590499 SLC30A4O14863 429 aa11.48□□□□□ -0.57
SMAD4-211ENST00000590499 SNAP91O60641 907 aa11.48□□□□□ -0.57
SMAD4-211ENST00000590499 SRGAP2O75044 1071 aa11.48□□□□□ -0.57
SMAD4-211ENST00000590499 RTN2O75298 545 aa11.48□□□□□ -0.57
SMAD4-211ENST00000590499 LRIG2O94898 1065 aa11.48□□□□□ -0.57
SMAD4-211ENST00000590499 FTLP02792 175 aaPredicted RBP11.48□□□□□ -0.57
SMAD4-211ENST00000590499 PLEKP08567 350 aaPredicted RBP11.48□□□□□ -0.57
SMAD4-211ENST00000590499 ACADMP11310 421 aa11.48□□□□□ -0.57
SMAD4-211ENST00000590499 OR1E1P30953 314 aa11.48□□□□□ -0.57
SMAD4-211ENST00000590499 DPP6P42658 865 aa11.48□□□□□ -0.57
SMAD4-211ENST00000590499 SEMA3BQ13214 749 aa11.48□□□□□ -0.57
SMAD4-211ENST00000590499 CLN3Q13286 438 aa11.48□□□□□ -0.57
SMAD4-211ENST00000590499 ELAVL3Q14576 367 aaKnown RBP11.48□□□□□ -0.57
SMAD4-211ENST00000590499 PUM1Q14671 1186 aaKnown RBP eCLIP11.48□□□□□ -0.57
SMAD4-211ENST00000590499 DCUN1D2Q6PH85 259 aa11.48□□□□□ -0.57
SMAD4-211ENST00000590499 ZNF783Q6ZMS7 281 aa11.48□□□□□ -0.57
SMAD4-211ENST00000590499 SH2D3CQ8N5H7 860 aa11.48□□□□□ -0.57
SMAD4-211ENST00000590499 DEFB119Q8N690 84 aa11.48□□□□□ -0.57
SMAD4-211ENST00000590499 BEND7Q8N7W2 519 aaPredicted RBP11.48□□□□□ -0.57
SMAD4-211ENST00000590499 C12orf50Q8NA57 414 aaPredicted RBP11.48□□□□□ -0.57
SMAD4-211ENST00000590499 CADM4Q8NFZ8 388 aa11.48□□□□□ -0.57
SMAD4-211ENST00000590499 FNIP1Q8TF40 1166 aa11.48□□□□□ -0.57
SMAD4-211ENST00000590499 DNASE2BQ8WZ79 361 aa11.48□□□□□ -0.57
SMAD4-211ENST00000590499 MUC3BQ9H195 1237 aa11.48□□□□□ -0.57
SMAD4-211ENST00000590499 PABPC3Q9H361 631 aaKnown RBP11.48□□□□□ -0.57
SMAD4-211ENST00000590499 RETREG1Q9H6L5 497 aa11.48□□□□□ -0.57
SMAD4-211ENST00000590499 VPS51Q9UID3 782 aa11.48□□□□□ -0.57
SMAD4-211ENST00000590499 NENFQ9UMX5 172 aa11.48□□□□□ -0.57
SMAD4-211ENST00000590499 BZW2Q9Y6E2 419 aaKnown RBP11.48□□□□□ -0.57
SMAD4-211ENST00000590499 ATXN2Q99700 1313 aaKnown RBP11.48□□□□□ -0.57
SMAD4-211ENST00000590499 KHNYNO15037 678 aaKnown RBP11.47□□□□□ -0.57
SMAD4-211ENST00000590499 NDUFS2O75306 463 aa11.47□□□□□ -0.57
SMAD4-211ENST00000590499 ZMPSTE24O75844 475 aa11.47□□□□□ -0.57
SMAD4-211ENST00000590499 MT-CO1P00395 513 aa11.47□□□□□ -0.57
SMAD4-211ENST00000590499 SERPING1P05155 500 aa11.47□□□□□ -0.57
SMAD4-211ENST00000590499 SDHBP21912 280 aa11.47□□□□□ -0.57
SMAD4-211ENST00000590499 HNRNPH3P31942 346 aaKnown RBP11.47□□□□□ -0.57
SMAD4-211ENST00000590499 CASP14P31944 242 aa11.47□□□□□ -0.57
SMAD4-211ENST00000590499 L1CAMP32004 1257 aa11.47□□□□□ -0.57
SMAD4-211ENST00000590499 ACSL1P33121 698 aa11.47□□□□□ -0.57
SMAD4-211ENST00000590499 MAPKAPK2P49137 400 aa11.47□□□□□ -0.57
SMAD4-211ENST00000590499 AIF1P55008 147 aa11.47□□□□□ -0.57
SMAD4-211ENST00000590499 CST6Q15828 149 aa11.47□□□□□ -0.57
SMAD4-211ENST00000590499 TTC31Q49AM3 519 aaPredicted RBP11.47□□□□□ -0.57
SMAD4-211ENST00000590499 AASDHQ4L235 1098 aaPredicted RBP11.47□□□□□ -0.57
SMAD4-211ENST00000590499 TDRD12Q587J7 1177 aaKnown RBP11.47□□□□□ -0.57
SMAD4-211ENST00000590499 SLC23A3Q6PIS1 610 aa11.47□□□□□ -0.57
SMAD4-211ENST00000590499 USP30Q70CQ3 517 aa11.47□□□□□ -0.57
SMAD4-211ENST00000590499 TMC6Q7Z403 805 aa11.47□□□□□ -0.57
SMAD4-211ENST00000590499 SLFN11Q7Z7L1 901 aa11.47□□□□□ -0.57
SMAD4-211ENST00000590499 PYROXD2Q8N2H3 581 aa11.47□□□□□ -0.57
SMAD4-211ENST00000590499 STK40Q8N2I9 435 aa11.47□□□□□ -0.57
SMAD4-211ENST00000590499 ARFGAP1Q8N6T3 406 aa11.47□□□□□ -0.57
SMAD4-211ENST00000590499 OR7D4Q8NG98 312 aa11.47□□□□□ -0.57
SMAD4-211ENST00000590499 CPLX3Q8WVH0 158 aa11.47□□□□□ -0.57
SMAD4-211ENST00000590499 FAM131CQ96AQ9 280 aa11.47□□□□□ -0.57
SMAD4-211ENST00000590499 ZNF653Q96CK0 615 aa11.47□□□□□ -0.57
SMAD4-211ENST00000590499 TBC1D31Q96DN5 1066 aa11.47□□□□□ -0.57
SMAD4-211ENST00000590499 RTKNQ9BST9 563 aa11.47□□□□□ -0.57
SMAD4-211ENST00000590499 C2orf49Q9BVC5 232 aaPredicted RBP11.47□□□□□ -0.57
SMAD4-211ENST00000590499 GPR174Q9BXC1 333 aa11.47□□□□□ -0.57
SMAD4-211ENST00000590499 TRIM7Q9C029 511 aa11.47□□□□□ -0.57
SMAD4-211ENST00000590499 PCED1AQ9H1Q7 454 aa11.47□□□□□ -0.57
SMAD4-211ENST00000590499 CAPN10Q9HC96 672 aa11.47□□□□□ -0.57
SMAD4-211ENST00000590499 NDFIP2Q9NV92 336 aa11.47□□□□□ -0.57
SMAD4-211ENST00000590499 TMEM248Q9NWD8 314 aa11.47□□□□□ -0.57
SMAD4-211ENST00000590499 CNOT8Q9UFF9 292 aaKnown RBP11.47□□□□□ -0.57
SMAD4-211ENST00000590499 SERGEFQ9UGK8 458 aa11.47□□□□□ -0.57
SMAD4-211ENST00000590499 ADAMTS1Q9UHI8 967 aa11.47□□□□□ -0.57
SMAD4-211ENST00000590499 SLC25A13Q9UJS0 675 aa11.47□□□□□ -0.57
SMAD4-211ENST00000590499 FZD10Q9ULW2 581 aa11.47□□□□□ -0.57
SMAD4-211ENST00000590499 SCML1Q9UN30 329 aa11.47□□□□□ -0.57
SMAD4-211ENST00000590499 LUC7L2Q9Y383 392 aaKnown RBP11.47□□□□□ -0.57
SMAD4-211ENST00000590499 CABIN1Q9Y6J0 2220 aa11.47□□□□□ -0.57
SMAD4-211ENST00000590499 ANKRD62A6NC57 917 aa11.46□□□□□ -0.57
SMAD4-211ENST00000590499 METTL12A8MUP2 240 aa11.46□□□□□ -0.57
SMAD4-211ENST00000590499 TM4SF5O14894 197 aa11.46□□□□□ -0.57
SMAD4-211ENST00000590499 MID1O15344 667 aa11.46□□□□□ -0.57
SMAD4-211ENST00000590499 DNTTP04053 509 aa11.46□□□□□ -0.57
SMAD4-211ENST00000590499 TPM3P06753 285 aa11.46□□□□□ -0.57
SMAD4-211ENST00000590499 MYBL1P10243 752 aa11.46□□□□□ -0.57
SMAD4-211ENST00000590499 SRCP12931 536 aa11.46□□□□□ -0.57
SMAD4-211ENST00000590499 GLDCP23378 1020 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 438.1 ms