RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 ZNF358Q9NW07 568 aa19.46■□□□□ 0.71
PRKCSH-209ENST00000589838 NKX1-2Q9UD57 310 aaPredicted RBP19.46■□□□□ 0.71
PRKCSH-209ENST00000589838 ABT1Q9ULW3 272 aaKnown RBP19.46■□□□□ 0.71
PRKCSH-209ENST00000589838 PLXNA3P51805 1871 aa19.46■□□□□ 0.71
PRKCSH-209ENST00000589838 TMEM88BA6NKF7 163 aa19.45■□□□□ 0.7
PRKCSH-209ENST00000589838 F8W810 466 aa19.45■□□□□ 0.7
PRKCSH-209ENST00000589838 HSPA4LO95757 839 aa19.45■□□□□ 0.7
PRKCSH-209ENST00000589838 MT-CYBP00156 380 aaPredicted RBP19.45■□□□□ 0.7
PRKCSH-209ENST00000589838 OR4Q2P0C623 313 aa19.45■□□□□ 0.7
PRKCSH-209ENST00000589838 GM2AP17900 193 aa19.45■□□□□ 0.7
PRKCSH-209ENST00000589838 ADRA1AP35348 466 aa19.45■□□□□ 0.7
PRKCSH-209ENST00000589838 PAPOLAP51003 745 aaKnown RBP19.45■□□□□ 0.7
PRKCSH-209ENST00000589838 NDST2P52849 883 aa19.45■□□□□ 0.7
PRKCSH-209ENST00000589838 TBX4P57082 545 aa19.45■□□□□ 0.7
PRKCSH-209ENST00000589838 SLC12A1Q13621 1099 aa19.45■□□□□ 0.7
PRKCSH-209ENST00000589838 RCN2Q14257 317 aa19.45■□□□□ 0.7
PRKCSH-209ENST00000589838 GRM3Q14832 879 aa19.45■□□□□ 0.7
PRKCSH-209ENST00000589838 C6orf163Q5TEZ5 329 aa19.45■□□□□ 0.7
PRKCSH-209ENST00000589838 GLT1D1Q96MS3 346 aa19.45■□□□□ 0.7
PRKCSH-209ENST00000589838 CAB39LQ9H9S4 337 aa19.45■□□□□ 0.7
PRKCSH-209ENST00000589838 IPO11Q9UI26 975 aaKnown RBP19.45■□□□□ 0.7
PRKCSH-209ENST00000589838 TCAF1Q9Y4C2 921 aa19.45■□□□□ 0.7
PRKCSH-209ENST00000589838 G3V2L1 256 aa19.45■□□□□ 0.7
PRKCSH-209ENST00000589838 ENTPD5O75356 428 aa19.45■□□□□ 0.7
PRKCSH-209ENST00000589838 TADA2AO75478 443 aa19.45■□□□□ 0.7
PRKCSH-209ENST00000589838 COL6A1P12109 1028 aa19.45■□□□□ 0.7
PRKCSH-209ENST00000589838 HK2P52789 917 aa19.45■□□□□ 0.7
PRKCSH-209ENST00000589838 TUBB3Q13509 450 aa19.45■□□□□ 0.7
PRKCSH-209ENST00000589838 USP10Q14694 798 aaKnown RBP19.45■□□□□ 0.7
PRKCSH-209ENST00000589838 CLLU1OSQ5K130 101 aa19.45■□□□□ 0.7
PRKCSH-209ENST00000589838 ACBD5Q5T8D3 534 aaPredicted RBP19.45■□□□□ 0.7
PRKCSH-209ENST00000589838 DENND5AQ6IQ26 1287 aa19.45■□□□□ 0.7
PRKCSH-209ENST00000589838 RFWD3Q6PCD5 774 aa19.45■□□□□ 0.7
PRKCSH-209ENST00000589838 UMODL1-AS1Q8N2C9 162 aa19.45■□□□□ 0.7
PRKCSH-209ENST00000589838 ATP6V0D2Q8N8Y2 350 aa19.45■□□□□ 0.7
PRKCSH-209ENST00000589838 TTC8Q8TAM2 541 aa19.45■□□□□ 0.7
PRKCSH-209ENST00000589838 SLC39A13Q96H72 371 aa19.45■□□□□ 0.7
PRKCSH-209ENST00000589838 FTHL17Q9BXU8 183 aa19.45■□□□□ 0.7
PRKCSH-209ENST00000589838 PNPOQ9NVS9 261 aa19.45■□□□□ 0.7
PRKCSH-209ENST00000589838 E2F8A0AVK6 867 aa19.44■□□□□ 0.7
PRKCSH-209ENST00000589838 MOXD2PA6NHM9 499 aa19.44■□□□□ 0.7
PRKCSH-209ENST00000589838 PRR5-ARHGAP8B1AHC4 643 aa19.44■□□□□ 0.7
PRKCSH-209ENST00000589838 CIB2O75838 187 aa19.44■□□□□ 0.7
PRKCSH-209ENST00000589838 HLA-DQB2P05538 268 aa19.44■□□□□ 0.7
PRKCSH-209ENST00000589838 ELNP15502 786 aa19.44■□□□□ 0.7
PRKCSH-209ENST00000589838 RHOQP17081 205 aa19.44■□□□□ 0.7
PRKCSH-209ENST00000589838 PGFP49763 221 aa19.44■□□□□ 0.7
PRKCSH-209ENST00000589838 IDH3AP50213 366 aa19.44■□□□□ 0.7
PRKCSH-209ENST00000589838 CSRP3P50461 194 aa19.44■□□□□ 0.7
PRKCSH-209ENST00000589838 RENBPP51606 427 aa19.44■□□□□ 0.7
PRKCSH-209ENST00000589838 MXRA7P84157 204 aa19.44■□□□□ 0.7
PRKCSH-209ENST00000589838 ARHGAP8P85298 464 aa19.44■□□□□ 0.7
PRKCSH-209ENST00000589838 KDSRQ06136 332 aa19.44■□□□□ 0.7
PRKCSH-209ENST00000589838 THOC5Q13769 683 aaKnown RBP19.44■□□□□ 0.7
PRKCSH-209ENST00000589838 HNRNPDQ14103 355 aaKnown RBP19.44■□□□□ 0.7
PRKCSH-209ENST00000589838 POU6F1Q14863 301 aa19.44■□□□□ 0.7
PRKCSH-209ENST00000589838 CFAP157Q5JU67 520 aa19.44■□□□□ 0.7
PRKCSH-209ENST00000589838 ARTNQ5T4W7 220 aa19.44■□□□□ 0.7
PRKCSH-209ENST00000589838 C14orf80Q86SX3 495 aa19.44■□□□□ 0.7
PRKCSH-209ENST00000589838 TNS4Q8IZW8 715 aa19.44■□□□□ 0.7
PRKCSH-209ENST00000589838 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.44■□□□□ 0.7
PRKCSH-209ENST00000589838 STMN2Q93045 179 aa19.44■□□□□ 0.7
PRKCSH-209ENST00000589838 FAM167BQ9BTA0 163 aa19.44■□□□□ 0.7
PRKCSH-209ENST00000589838 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.44■□□□□ 0.73e-6■■■■□ 19.8
PRKCSH-209ENST00000589838 SLC25A51Q9H1U9 297 aa19.44■□□□□ 0.7
PRKCSH-209ENST00000589838 OLA1Q9NTK5 396 aaKnown RBP19.44■□□□□ 0.7
PRKCSH-209ENST00000589838 STOML1Q9UBI4 398 aa19.44■□□□□ 0.7
PRKCSH-209ENST00000589838 NYNRINQ9P2P1 1898 aaKnown RBP19.44■□□□□ 0.7
PRKCSH-209ENST00000589838 SIN3BO75182 1162 aa19.43■□□□□ 0.7
PRKCSH-209ENST00000589838 IRF9Q00978 393 aa19.43■□□□□ 0.7
PRKCSH-209ENST00000589838 ASPHQ12797 758 aa19.43■□□□□ 0.7
PRKCSH-209ENST00000589838 RABGAP1LQ5R372 815 aa19.43■□□□□ 0.7
PRKCSH-209ENST00000589838 RANBP10Q6VN20 620 aa19.43■□□□□ 0.7
PRKCSH-209ENST00000589838 RBM15BQ8NDT2 890 aaKnown RBP19.43■□□□□ 0.7
PRKCSH-209ENST00000589838 HHIPL1Q96JK4 782 aa19.43■□□□□ 0.7
PRKCSH-209ENST00000589838 ZIC5Q96T25 663 aa19.43■□□□□ 0.7
PRKCSH-209ENST00000589838 ZYG11BQ9C0D3 744 aa19.43■□□□□ 0.7
PRKCSH-209ENST00000589838 CDH19Q9H159 772 aa19.43■□□□□ 0.7
PRKCSH-209ENST00000589838 TASP1Q9H6P5 420 aa19.43■□□□□ 0.7
PRKCSH-209ENST00000589838 OXSMQ9NWU1 459 aa19.43■□□□□ 0.7
PRKCSH-209ENST00000589838 MPP6Q9NZW5 540 aa19.43■□□□□ 0.7
PRKCSH-209ENST00000589838 NUDT5Q9UKK9 219 aa19.43■□□□□ 0.7
PRKCSH-209ENST00000589838 OR6C75A6NL08 312 aa19.43■□□□□ 0.7
PRKCSH-209ENST00000589838 PMPCBO75439 489 aa19.43■□□□□ 0.7
PRKCSH-209ENST00000589838 VAPBO95292 243 aa19.43■□□□□ 0.7
PRKCSH-209ENST00000589838 AHSGP02765 367 aa19.43■□□□□ 0.7
PRKCSH-209ENST00000589838 RPSAP08865 295 aaKnown RBP19.43■□□□□ 0.7
PRKCSH-209ENST00000589838 CRABP2P29373 138 aa19.43■□□□□ 0.7
PRKCSH-209ENST00000589838 CPA2P48052 419 aa19.43■□□□□ 0.7
PRKCSH-209ENST00000589838 PSEN1P49768 467 aa19.43■□□□□ 0.7
PRKCSH-209ENST00000589838 DLG2Q15700 870 aa19.43■□□□□ 0.7
PRKCSH-209ENST00000589838 CCDC6Q16204 474 aa19.43■□□□□ 0.7
PRKCSH-209ENST00000589838 DDR2Q16832 855 aa19.43■□□□□ 0.7
PRKCSH-209ENST00000589838 KHDC1Q4VXA5 237 aaKnown RBP19.43■□□□□ 0.7
PRKCSH-209ENST00000589838 FSCBQ5H9T9 825 aa19.43■□□□□ 0.7
PRKCSH-209ENST00000589838 KIAA0930Q6ICG6 404 aaPredicted RBP19.43■□□□□ 0.7
PRKCSH-209ENST00000589838 ZYG11AQ6WRX3 759 aa19.43■□□□□ 0.7
PRKCSH-209ENST00000589838 SCUBE1Q8IWY4 988 aa19.43■□□□□ 0.7
PRKCSH-209ENST00000589838 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.43■□□□□ 0.7
PRKCSH-209ENST00000589838 TSEN34Q9BSV6 310 aaKnown RBP19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms