RNA–Protein interactions for RNA: ENST00000589538.5

DNMT1-221, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-221ENST00000589538 CA9Q16790 459 aa16.75■□□□□ 0.27
DNMT1-221ENST00000589538 INO80DQ53TQ3 878 aaPredicted RBP16.75■□□□□ 0.27
DNMT1-221ENST00000589538 DCAF12L1Q5VU92 463 aa16.75■□□□□ 0.27
DNMT1-221ENST00000589538 SLC23A3Q6PIS1 610 aa16.75■□□□□ 0.27
DNMT1-221ENST00000589538 HDDC3Q8N4P3 179 aa16.75■□□□□ 0.27
DNMT1-221ENST00000589538 OR2A12Q8NGT7 310 aa16.75■□□□□ 0.27
DNMT1-221ENST00000589538 PIP4K2CQ8TBX8 421 aa16.75■□□□□ 0.27
DNMT1-221ENST00000589538 BTBD6Q96KE9 485 aa16.75■□□□□ 0.27
DNMT1-221ENST00000589538 NOL6Q9H6R4 1146 aaKnown RBP16.75■□□□□ 0.27
DNMT1-221ENST00000589538 DYRK4Q9NR20 520 aa16.75■□□□□ 0.27
DNMT1-221ENST00000589538 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.75■□□□□ 0.27
DNMT1-221ENST00000589538 SPTLC3Q9NUV7 552 aa16.75■□□□□ 0.27
DNMT1-221ENST00000589538 IL36AQ9UHA7 158 aa16.75■□□□□ 0.27
DNMT1-221ENST00000589538 PPM1HQ9ULR3 514 aa16.75■□□□□ 0.27
DNMT1-221ENST00000589538 CFAP54Q96N23 3096 aa16.75■□□□□ 0.27
DNMT1-221ENST00000589538 K7ERQ8 282 aa16.74■□□□□ 0.27
DNMT1-221ENST00000589538 RARAP10276 462 aa16.74■□□□□ 0.27
DNMT1-221ENST00000589538 ERCC2P18074 760 aa16.74■□□□□ 0.27
DNMT1-221ENST00000589538 IL1R2P27930 398 aa16.74■□□□□ 0.27
DNMT1-221ENST00000589538 CYLC1P35663 651 aaPredicted RBP16.74■□□□□ 0.27
DNMT1-221ENST00000589538 SSR1P43307 286 aaKnown RBP16.74■□□□□ 0.27
DNMT1-221ENST00000589538 LIMK1P53667 647 aa16.74■□□□□ 0.27
DNMT1-221ENST00000589538 SNRPD1P62314 119 aaKnown RBP16.74■□□□□ 0.27
DNMT1-221ENST00000589538 SLC25A11Q02978 314 aaKnown RBP16.74■□□□□ 0.27
DNMT1-221ENST00000589538 DPYSQ14117 519 aa16.74■□□□□ 0.27
DNMT1-221ENST00000589538 SMTNL2Q2TAL5 461 aa16.74■□□□□ 0.27
DNMT1-221ENST00000589538 TRIM61Q5EBN2 209 aa16.74■□□□□ 0.27
DNMT1-221ENST00000589538 CARD16Q5EG05 197 aa16.74■□□□□ 0.27
DNMT1-221ENST00000589538 OR2T34Q8NGX1 318 aa16.74■□□□□ 0.27
DNMT1-221ENST00000589538 RFFLQ8WZ73 363 aa16.74■□□□□ 0.27
DNMT1-221ENST00000589538 HSPH1Q92598 858 aa16.74■□□□□ 0.27
DNMT1-221ENST00000589538 HMCESQ96FZ2 354 aa16.74■□□□□ 0.27
DNMT1-221ENST00000589538 PPP1R16AQ96I34 528 aa16.74■□□□□ 0.27
DNMT1-221ENST00000589538 PACSIN1Q9BY11 444 aa16.74■□□□□ 0.27
DNMT1-221ENST00000589538 NEUROG2Q9H2A3 272 aa16.74■□□□□ 0.27
DNMT1-221ENST00000589538 LRRC19Q9H756 370 aa16.74■□□□□ 0.27
DNMT1-221ENST00000589538 CWC15Q9P013 229 aaKnown RBP16.74■□□□□ 0.27
DNMT1-221ENST00000589538 RCOR3Q9P2K3 495 aaPredicted RBP16.74■□□□□ 0.27
DNMT1-221ENST00000589538 A0A1B0GTW7 788 aa16.73■□□□□ 0.27
DNMT1-221ENST00000589538 BUB1O43683 1085 aa16.73■□□□□ 0.27
DNMT1-221ENST00000589538 MTA2O94776 668 aa16.73■□□□□ 0.27
DNMT1-221ENST00000589538 CD160O95971 181 aa16.73■□□□□ 0.27
DNMT1-221ENST00000589538 GSRP00390 522 aa16.73■□□□□ 0.27
DNMT1-221ENST00000589538 SERPINF2P08697 491 aa16.73■□□□□ 0.27
DNMT1-221ENST00000589538 KRT7P08729 469 aa16.73■□□□□ 0.27
DNMT1-221ENST00000589538 ID4P47928 161 aa16.73■□□□□ 0.27
DNMT1-221ENST00000589538 DNA2P51530 1060 aa16.73■□□□□ 0.27
DNMT1-221ENST00000589538 KRT81Q14533 505 aa16.73■□□□□ 0.27
DNMT1-221ENST00000589538 SPA17Q15506 151 aa16.73■□□□□ 0.27
DNMT1-221ENST00000589538 KCNT1Q5JUK3 1230 aa16.73■□□□□ 0.27
DNMT1-221ENST00000589538 POLNQ7Z5Q5 900 aa16.73■□□□□ 0.27
DNMT1-221ENST00000589538 AADATQ8N5Z0 425 aa16.73■□□□□ 0.27
DNMT1-221ENST00000589538 OR14C36Q8NHC7 312 aa16.73■□□□□ 0.27
DNMT1-221ENST00000589538 SLC35G2Q8TBE7 412 aa16.73■□□□□ 0.27
DNMT1-221ENST00000589538 LRIG1Q96JA1 1093 aa16.73■□□□□ 0.27
DNMT1-221ENST00000589538 HEPHQ9BQS7 1158 aa16.73■□□□□ 0.27
DNMT1-221ENST00000589538 TNKS2Q9H2K2 1166 aa16.73■□□□□ 0.27
DNMT1-221ENST00000589538 C6orf106Q9H6K1 298 aaPredicted RBP16.73■□□□□ 0.27
DNMT1-221ENST00000589538 TMEM74BQ9NUR3 256 aa16.73■□□□□ 0.27
DNMT1-221ENST00000589538 SERGEFQ9UGK8 458 aa16.73■□□□□ 0.27
DNMT1-221ENST00000589538 SLC6A14Q9UN76 642 aa16.73■□□□□ 0.27
DNMT1-221ENST00000589538 FCF1Q9Y324 198 aaKnown RBP16.73■□□□□ 0.27
DNMT1-221ENST00000589538 ATXN2Q99700 1313 aaKnown RBP16.72■□□□□ 0.27
DNMT1-221ENST00000589538 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.72■□□□□ 0.27
DNMT1-221ENST00000589538 ZNF821O75541 412 aaPredicted RBP16.72■□□□□ 0.27
DNMT1-221ENST00000589538 CFIP05156 583 aa16.72■□□□□ 0.27
DNMT1-221ENST00000589538 SYPP08247 313 aa16.72■□□□□ 0.27
DNMT1-221ENST00000589538 CDC25BP30305 580 aa16.72■□□□□ 0.27
DNMT1-221ENST00000589538 SERPINB6P35237 376 aa16.72■□□□□ 0.27
DNMT1-221ENST00000589538 DRD3P35462 400 aa16.72■□□□□ 0.27
DNMT1-221ENST00000589538 CCNHP51946 323 aaPredicted RBP16.72■□□□□ 0.27
DNMT1-221ENST00000589538 RAD51Q06609 339 aa16.72■□□□□ 0.27
DNMT1-221ENST00000589538 PUM1Q14671 1186 aaKnown RBP eCLIP16.72■□□□□ 0.274e-6■□□□□ 8.5
DNMT1-221ENST00000589538 TCEAL1Q15170 157 aa16.72■□□□□ 0.27
DNMT1-221ENST00000589538 RSPO4Q2I0M5 234 aaPredicted RBP16.72■□□□□ 0.27
DNMT1-221ENST00000589538 DAB2IPQ5VWQ8 1189 aa16.72■□□□□ 0.27
DNMT1-221ENST00000589538 KIAA0895LQ68EN5 471 aa16.72■□□□□ 0.27
DNMT1-221ENST00000589538 TMCO3Q6UWJ1 677 aa16.72■□□□□ 0.27
DNMT1-221ENST00000589538 DPY19L3Q6ZPD9 716 aa16.72■□□□□ 0.27
DNMT1-221ENST00000589538 TMTC1Q8IUR5 882 aa16.72■□□□□ 0.27
DNMT1-221ENST00000589538 MAP7D3Q8IWC1 876 aa16.72■□□□□ 0.27
DNMT1-221ENST00000589538 OR2AP1Q8NGE2 309 aa16.72■□□□□ 0.27
DNMT1-221ENST00000589538 SNX19Q92543 992 aa16.72■□□□□ 0.27
DNMT1-221ENST00000589538 FAM131CQ96AQ9 280 aa16.72■□□□□ 0.27
DNMT1-221ENST00000589538 CSPG4P5Q96PW8 444 aa16.72■□□□□ 0.27
DNMT1-221ENST00000589538 RTKNQ9BST9 563 aa16.72■□□□□ 0.27
DNMT1-221ENST00000589538 EDEM2Q9BV94 578 aa16.72■□□□□ 0.27
DNMT1-221ENST00000589538 SMOC1Q9H4F8 434 aa16.72■□□□□ 0.27
DNMT1-221ENST00000589538 OSGEPQ9NPF4 335 aa16.72■□□□□ 0.27
DNMT1-221ENST00000589538 IMPACTQ9P2X3 320 aa16.72■□□□□ 0.27
DNMT1-221ENST00000589538 UBA2Q9UBT2 640 aaPredicted RBP16.72■□□□□ 0.27
DNMT1-221ENST00000589538 SARDHQ9UL12 918 aa16.72■□□□□ 0.27
DNMT1-221ENST00000589538 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.72■□□□□ 0.27
DNMT1-221ENST00000589538 PI4KAP42356 2102 aa16.72■□□□□ 0.27
DNMT1-221ENST00000589538 LNP1A1A4G5 178 aa16.71■□□□□ 0.27
DNMT1-221ENST00000589538 GOLGA6L6A8MZA4 724 aa16.71■□□□□ 0.27
DNMT1-221ENST00000589538 KPNA3O00505 521 aaPredicted RBP16.71■□□□□ 0.27
DNMT1-221ENST00000589538 BCAT2O15382 392 aaPredicted RBP16.71■□□□□ 0.27
DNMT1-221ENST00000589538 PRAMEF11O60813 436 aa16.71■□□□□ 0.27
DNMT1-221ENST00000589538 IPO7O95373 1038 aaKnown RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms