RNA–Protein interactions for RNA: ENST00000589381.5

ERCC1-210, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-210ENST00000589381 ZNF487B1APH4 448 aa18.77■□□□□ 0.6
ERCC1-210ENST00000589381 ALOX15BO15296 676 aa18.77■□□□□ 0.6
ERCC1-210ENST00000589381 MAP3K13O43283 966 aa18.77■□□□□ 0.6
ERCC1-210ENST00000589381 SFSWAPQ12872 951 aaKnown RBP18.77■□□□□ 0.6
ERCC1-210ENST00000589381 MAP7D1Q3KQU3 841 aa18.77■□□□□ 0.6
ERCC1-210ENST00000589381 RNF10Q8N5U6 811 aaKnown RBP18.77■□□□□ 0.6
ERCC1-210ENST00000589381 NETO2Q8NC67 525 aa18.77■□□□□ 0.6
ERCC1-210ENST00000589381 RNF25Q96BH1 459 aaPredicted RBP18.77■□□□□ 0.6
ERCC1-210ENST00000589381 FAF2Q96CS3 445 aa18.77■□□□□ 0.6
ERCC1-210ENST00000589381 FAM129BQ96TA1 746 aa18.77■□□□□ 0.6
ERCC1-210ENST00000589381 TNKS2Q9H2K2 1166 aa18.77■□□□□ 0.6
ERCC1-210ENST00000589381 UBA2Q9UBT2 640 aaPredicted RBP18.77■□□□□ 0.6
ERCC1-210ENST00000589381 GUCA1BQ9UMX6 200 aa18.77■□□□□ 0.6
ERCC1-210ENST00000589381 SCML1Q9UN30 329 aa18.77■□□□□ 0.6
ERCC1-210ENST00000589381 ACTL7AQ9Y615 435 aa18.77■□□□□ 0.6
ERCC1-210ENST00000589381 WDR87Q6ZQQ6 2873 aa18.77■□□□□ 0.6
ERCC1-210ENST00000589381 DMDP11532 3685 aa18.76■□□□□ 0.59
ERCC1-210ENST00000589381 GRID2IPA4D2P6 1211 aa18.76■□□□□ 0.59
ERCC1-210ENST00000589381 PROB1E7EW31 1015 aa18.76■□□□□ 0.59
ERCC1-210ENST00000589381 MCF2LO15068 1137 aa18.76■□□□□ 0.59
ERCC1-210ENST00000589381 PRAMEF11O60813 436 aa18.76■□□□□ 0.59
ERCC1-210ENST00000589381 PALMO75781 387 aa18.76■□□□□ 0.59
ERCC1-210ENST00000589381 CD160O95971 181 aa18.76■□□□□ 0.59
ERCC1-210ENST00000589381 ADH1BP00325 375 aa18.76■□□□□ 0.59
ERCC1-210ENST00000589381 IL1BP01584 269 aa18.76■□□□□ 0.59
ERCC1-210ENST00000589381 LMNAP02545 664 aaKnown RBP18.76■□□□□ 0.59
ERCC1-210ENST00000589381 OXTRP30559 389 aa18.76■□□□□ 0.59
ERCC1-210ENST00000589381 PSMD8P48556 350 aa18.76■□□□□ 0.59
ERCC1-210ENST00000589381 TPMTP51580 245 aa18.76■□□□□ 0.59
ERCC1-210ENST00000589381 ELF2Q15723 593 aa18.76■□□□□ 0.59
ERCC1-210ENST00000589381 CST6Q15828 149 aa18.76■□□□□ 0.59
ERCC1-210ENST00000589381 INO80DQ53TQ3 878 aaPredicted RBP18.76■□□□□ 0.59
ERCC1-210ENST00000589381 FAM46CQ5VWP2 391 aa18.76■□□□□ 0.59
ERCC1-210ENST00000589381 KATNAL2Q8IYT4 538 aa18.76■□□□□ 0.59
ERCC1-210ENST00000589381 ATPAF2Q8N5M1 289 aa18.76■□□□□ 0.59
ERCC1-210ENST00000589381 GANCQ8TET4 914 aa18.76■□□□□ 0.59
ERCC1-210ENST00000589381 ISG20Q96AZ6 181 aaKnown RBP18.76■□□□□ 0.59
ERCC1-210ENST00000589381 RNF157Q96PX1 679 aa18.76■□□□□ 0.59
ERCC1-210ENST00000589381 ITM2CQ9NQX7 267 aa18.76■□□□□ 0.59
ERCC1-210ENST00000589381 USP36Q9P275 1121 aaKnown RBP18.76■□□□□ 0.59
ERCC1-210ENST00000589381 IPO11Q9UI26 975 aaKnown RBP18.76■□□□□ 0.59
ERCC1-210ENST00000589381 AMFRQ9UKV5 643 aa18.76■□□□□ 0.59
ERCC1-210ENST00000589381 SMG5Q9UPR3 1016 aaKnown RBP18.76■□□□□ 0.59
ERCC1-210ENST00000589381 C3orf70A6NLC5 250 aaPredicted RBP18.75■□□□□ 0.59
ERCC1-210ENST00000589381 C1QTNF3-AMACRE9PGA6 284 aa18.75■□□□□ 0.59
ERCC1-210ENST00000589381 J3KR12 359 aa18.75■□□□□ 0.59
ERCC1-210ENST00000589381 TMCC1O94876 653 aa18.75■□□□□ 0.59
ERCC1-210ENST00000589381 ZRANB2O95218 330 aaKnown RBP eCLIP18.75■□□□□ 0.59
ERCC1-210ENST00000589381 RHOAP61586 193 aa18.75■□□□□ 0.59
ERCC1-210ENST00000589381 SNRPD1P62314 119 aaKnown RBP18.75■□□□□ 0.59
ERCC1-210ENST00000589381 IL10RBQ08334 325 aa18.75■□□□□ 0.59
ERCC1-210ENST00000589381 PAFAH1B3Q15102 231 aaKnown RBP18.75■□□□□ 0.59
ERCC1-210ENST00000589381 CARD16Q5EG05 197 aa18.75■□□□□ 0.59
ERCC1-210ENST00000589381 NCBP2-AS2Q69YL0 99 aa18.75■□□□□ 0.59
ERCC1-210ENST00000589381 SLC36A4Q6YBV0 504 aa18.75■□□□□ 0.59
ERCC1-210ENST00000589381 PEX26Q7Z412 305 aa18.75■□□□□ 0.59
ERCC1-210ENST00000589381 CCDC50Q8IVM0 306 aa18.75■□□□□ 0.59
ERCC1-210ENST00000589381 RCOR2Q8IZ40 523 aa18.75■□□□□ 0.59
ERCC1-210ENST00000589381 RYBPQ8N488 228 aaPredicted RBP18.75■□□□□ 0.59
ERCC1-210ENST00000589381 FAM160A2Q8N612 972 aaPredicted RBP18.75■□□□□ 0.59
ERCC1-210ENST00000589381 LRRC57Q8N9N7 239 aa18.75■□□□□ 0.59
ERCC1-210ENST00000589381 OR2A12Q8NGT7 310 aa18.75■□□□□ 0.59
ERCC1-210ENST00000589381 FAM122AQ96E09 287 aa18.75■□□□□ 0.59
ERCC1-210ENST00000589381 RBM41Q96IZ5 413 aaKnown RBP18.75■□□□□ 0.59
ERCC1-210ENST00000589381 PDLIM2Q96JY6 352 aa18.75■□□□□ 0.59
ERCC1-210ENST00000589381 PHOX2BQ99453 314 aa18.75■□□□□ 0.59
ERCC1-210ENST00000589381 OMDQ99983 421 aa18.75■□□□□ 0.59
ERCC1-210ENST00000589381 TM6SF2Q9BZW4 377 aa18.75■□□□□ 0.59
ERCC1-210ENST00000589381 PABPC3Q9H361 631 aaKnown RBP18.75■□□□□ 0.59
ERCC1-210ENST00000589381 NCKAP1Q9Y2A7 1128 aa18.75■□□□□ 0.59
ERCC1-210ENST00000589381 IGHV1OR15-9A0A0B4J2B8 117 aa18.74■□□□□ 0.59
ERCC1-210ENST00000589381 CCDC66A2RUB6 948 aa18.74■□□□□ 0.59
ERCC1-210ENST00000589381 APOL1O14791 398 aa18.74■□□□□ 0.59
ERCC1-210ENST00000589381 MID1O15344 667 aa18.74■□□□□ 0.59
ERCC1-210ENST00000589381 MFSD11O43934 449 aa18.74■□□□□ 0.59
ERCC1-210ENST00000589381 NDUFS2O75306 463 aa18.74■□□□□ 0.59
ERCC1-210ENST00000589381 RHOBTB1O94844 696 aa18.74■□□□□ 0.59
ERCC1-210ENST00000589381 GSRP00390 522 aa18.74■□□□□ 0.59
ERCC1-210ENST00000589381 PRNPP04156 253 aa18.74■□□□□ 0.59
ERCC1-210ENST00000589381 C7P10643 843 aa18.74■□□□□ 0.59
ERCC1-210ENST00000589381 ZFXP17010 805 aaPredicted RBP18.74■□□□□ 0.59
ERCC1-210ENST00000589381 C5AR1P21730 350 aa18.74■□□□□ 0.59
ERCC1-210ENST00000589381 BCKDHBP21953 392 aa18.74■□□□□ 0.59
ERCC1-210ENST00000589381 CD6P30203 668 aa18.74■□□□□ 0.59
ERCC1-210ENST00000589381 CHRNA3P32297 505 aa18.74■□□□□ 0.59
ERCC1-210ENST00000589381 SLC8A1P32418 973 aa18.74■□□□□ 0.59
ERCC1-210ENST00000589381 CTNNA1P35221 906 aaKnown RBP18.74■□□□□ 0.59
ERCC1-210ENST00000589381 MARCKSL1P49006 195 aa18.74■□□□□ 0.59
ERCC1-210ENST00000589381 RPL6Q02878 288 aaKnown RBP18.74■□□□□ 0.59
ERCC1-210ENST00000589381 LPAL2Q16609 132 aa18.74■□□□□ 0.59
ERCC1-210ENST00000589381 PLK5Q496M5 336 aa18.74■□□□□ 0.59
ERCC1-210ENST00000589381 MFSD7Q6UXD7 560 aa18.74■□□□□ 0.59
ERCC1-210ENST00000589381 DPY19L3Q6ZPD9 716 aa18.74■□□□□ 0.59
ERCC1-210ENST00000589381 ARHGAP36Q6ZRI8 547 aa18.74■□□□□ 0.59
ERCC1-210ENST00000589381 KBTBD6Q86V97 674 aa18.74■□□□□ 0.59
ERCC1-210ENST00000589381 RFX6Q8HWS3 928 aa18.74■□□□□ 0.59
ERCC1-210ENST00000589381 LRRC49Q8IUZ0 686 aa18.74■□□□□ 0.59
ERCC1-210ENST00000589381 TP53INP2Q8IXH6 220 aa18.74■□□□□ 0.59
ERCC1-210ENST00000589381 PQLC3Q8N755 202 aa18.74■□□□□ 0.59
ERCC1-210ENST00000589381 FRMD1Q8N878 549 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms