RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	BMPR1A	P36894	532 aa		15.69	■□□□□ 0.1
DDX39A-209	ENST00000589318	IFI35	P80217	286 aa	Predicted RBP	15.69	■□□□□ 0.1
DDX39A-209	ENST00000589318	ACBD5	Q5T8D3	534 aa	Predicted RBP	15.69	■□□□□ 0.1
DDX39A-209	ENST00000589318	CAPN12	Q6ZSI9	719 aa		15.69	■□□□□ 0.1
DDX39A-209	ENST00000589318	TMC7	Q7Z402	723 aa		15.69	■□□□□ 0.1
DDX39A-209	ENST00000589318	SPRED2	Q7Z698	418 aa		15.69	■□□□□ 0.1
DDX39A-209	ENST00000589318	TFAP2D	Q7Z6R9	452 aa		15.69	■□□□□ 0.1
DDX39A-209	ENST00000589318	ATPAF2	Q8N5M1	289 aa		15.69	■□□□□ 0.1
DDX39A-209	ENST00000589318	FITM2	Q8N6M3	262 aa		15.69	■□□□□ 0.1
DDX39A-209	ENST00000589318	CNTD1	Q8N815	330 aa		15.69	■□□□□ 0.1
DDX39A-209	ENST00000589318	PDCD7	Q8N8D1	485 aa	Known RBP	15.69	■□□□□ 0.1
DDX39A-209	ENST00000589318	ATP11C	Q8NB49	1132 aa		15.69	■□□□□ 0.1
DDX39A-209	ENST00000589318	TEKT5	Q96M29	485 aa		15.69	■□□□□ 0.1
DDX39A-209	ENST00000589318	KLHL5	Q96PQ7	755 aa		15.69	■□□□□ 0.1
DDX39A-209	ENST00000589318	DCLRE1B	Q9H816	532 aa		15.69	■□□□□ 0.1
DDX39A-209	ENST00000589318	VPS37B	Q9H9H4	285 aa		15.69	■□□□□ 0.1
DDX39A-209	ENST00000589318	PLAC1	Q9HBJ0	212 aa		15.69	■□□□□ 0.1
DDX39A-209	ENST00000589318	ALG13	Q9NP73	1137 aa	Known RBP	15.69	■□□□□ 0.1
DDX39A-209	ENST00000589318	KLHL8	Q9P2G9	620 aa	Predicted RBP	15.69	■□□□□ 0.1
DDX39A-209	ENST00000589318		A8MUI8	341 aa		15.68	■□□□□ 0.1
DDX39A-209	ENST00000589318	TCP11X1	B4DZS4	312 aa		15.68	■□□□□ 0.1
DDX39A-209	ENST00000589318	ARHGEF15	O94989	841 aa		15.68	■□□□□ 0.1
DDX39A-209	ENST00000589318	KLKB1	P03952	638 aa		15.68	■□□□□ 0.1
DDX39A-209	ENST00000589318	PPP3CC	P48454	512 aa		15.68	■□□□□ 0.1
DDX39A-209	ENST00000589318	COG7	P83436	770 aa		15.68	■□□□□ 0.1
DDX39A-209	ENST00000589318	CDK16	Q00536	496 aa		15.68	■□□□□ 0.1
DDX39A-209	ENST00000589318	C5orf22	Q49AR2	442 aa		15.68	■□□□□ 0.1
DDX39A-209	ENST00000589318	KIF2B	Q8N4N8	673 aa		15.68	■□□□□ 0.1
DDX39A-209	ENST00000589318	SIGLEC10	Q96LC7	697 aa		15.68	■□□□□ 0.1
DDX39A-209	ENST00000589318	VAT1	Q99536	393 aa		15.68	■□□□□ 0.1
DDX39A-209	ENST00000589318	GBA3	Q9H227	469 aa		15.68	■□□□□ 0.1
DDX39A-209	ENST00000589318	GKN1	Q9NS71	199 aa		15.68	■□□□□ 0.1
DDX39A-209	ENST00000589318	RABGEF1	Q9UJ41	708 aa		15.68	■□□□□ 0.1
DDX39A-209	ENST00000589318	TRHDE	Q9UKU6	1024 aa		15.68	■□□□□ 0.1
DDX39A-209	ENST00000589318	LZTS1	Q9Y250	596 aa		15.68	■□□□□ 0.1
DDX39A-209	ENST00000589318	GBF1	Q92538	1859 aa		15.68	■□□□□ 0.1
DDX39A-209	ENST00000589318	DOCK6	Q96HP0	2047 aa		15.68	■□□□□ 0.1
DDX39A-209	ENST00000589318	ACSL4	O60488	711 aa		15.68	■□□□□ 0.1
DDX39A-209	ENST00000589318	STC2	O76061	302 aa		15.68	■□□□□ 0.1
DDX39A-209	ENST00000589318	JCHAIN	P01591	159 aa		15.68	■□□□□ 0.1
DDX39A-209	ENST00000589318	TSHR	P16473	764 aa		15.68	■□□□□ 0.1
DDX39A-209	ENST00000589318	TACR2	P21452	398 aa		15.68	■□□□□ 0.1
DDX39A-209	ENST00000589318	SLC6A4	P31645	630 aa		15.68	■□□□□ 0.1
DDX39A-209	ENST00000589318	CA8	P35219	290 aa		15.68	■□□□□ 0.1
DDX39A-209	ENST00000589318	CTNNB1	P35222	781 aa		15.68	■□□□□ 0.1
DDX39A-209	ENST00000589318	MTA1	Q13330	715 aa		15.68	■□□□□ 0.1
DDX39A-209	ENST00000589318	TAF12	Q16514	161 aa		15.68	■□□□□ 0.1
DDX39A-209	ENST00000589318	OR52E8	Q6IFG1	317 aa		15.68	■□□□□ 0.1
DDX39A-209	ENST00000589318	C3orf62	Q6ZUJ4	267 aa		15.68	■□□□□ 0.1
DDX39A-209	ENST00000589318	TRIM74	Q86UV6	250 aa		15.68	■□□□□ 0.1
DDX39A-209	ENST00000589318	TRIM73	Q86UV7	250 aa		15.68	■□□□□ 0.1
DDX39A-209	ENST00000589318	CHSY1	Q86X52	802 aa		15.68	■□□□□ 0.1
DDX39A-209	ENST00000589318	CIR1	Q86X95	450 aa	Predicted RBP	15.68	■□□□□ 0.1
DDX39A-209	ENST00000589318	WBP2	Q969T9	261 aa		15.68	■□□□□ 0.1
DDX39A-209	ENST00000589318	PLD4	Q96BZ4	506 aa		15.68	■□□□□ 0.1
DDX39A-209	ENST00000589318	FAM136A	Q96C01	138 aa		15.68	■□□□□ 0.1
DDX39A-209	ENST00000589318	ZFR	Q96KR1	1074 aa	Known RBP	15.68	■□□□□ 0.1
DDX39A-209	ENST00000589318	AGAP3	Q96P47	875 aa		15.68	■□□□□ 0.1
DDX39A-209	ENST00000589318	IL12RB2	Q99665	862 aa		15.68	■□□□□ 0.1
DDX39A-209	ENST00000589318	TCF25	Q9BQ70	676 aa		15.68	■□□□□ 0.1
DDX39A-209	ENST00000589318	KLF16	Q9BXK1	252 aa	Predicted RBP	15.68	■□□□□ 0.1
DDX39A-209	ENST00000589318	LRRC3	Q9BY71	257 aa		15.68	■□□□□ 0.1
DDX39A-209	ENST00000589318	FGFR1OP2	Q9NVK5	253 aa		15.68	■□□□□ 0.1
DDX39A-209	ENST00000589318	UXT	Q9UBK9	157 aa	Predicted RBP	15.68	■□□□□ 0.1
DDX39A-209	ENST00000589318	LGALS13	Q9UHV8	139 aa		15.68	■□□□□ 0.1
DDX39A-209	ENST00000589318	LINC01553	A4QN01	128 aa		15.67	■□□□□ 0.1
DDX39A-209	ENST00000589318	HIDE1	A8MVS5	230 aa		15.67	■□□□□ 0.1
DDX39A-209	ENST00000589318	CACNG3	O60359	315 aa		15.67	■□□□□ 0.1
DDX39A-209	ENST00000589318	NDST2	P52849	883 aa		15.67	■□□□□ 0.1
DDX39A-209	ENST00000589318	GSTA3	Q16772	222 aa		15.67	■□□□□ 0.1
DDX39A-209	ENST00000589318	KCTD11	Q693B1	232 aa		15.67	■□□□□ 0.1
DDX39A-209	ENST00000589318	KLHDC8B	Q8IXV7	354 aa		15.67	■□□□□ 0.1
DDX39A-209	ENST00000589318	MPP5	Q8N3R9	675 aa		15.67	■□□□□ 0.1
DDX39A-209	ENST00000589318	SPPL3	Q8TCT6	385 aa		15.67	■□□□□ 0.1
DDX39A-209	ENST00000589318	MAGEB18	Q96M61	343 aa		15.67	■□□□□ 0.1
DDX39A-209	ENST00000589318	RPRD1A	Q96P16	312 aa	Predicted RBP	15.67	■□□□□ 0.1
DDX39A-209	ENST00000589318	NUDCD1	Q96RS6	583 aa		15.67	■□□□□ 0.1
DDX39A-209	ENST00000589318	SLC22A12	Q96S37	553 aa		15.67	■□□□□ 0.1
DDX39A-209	ENST00000589318	MLPH	Q9BV36	600 aa	Predicted RBP	15.67	■□□□□ 0.1
DDX39A-209	ENST00000589318	NACA2	Q9H009	215 aa		15.67	■□□□□ 0.1
DDX39A-209	ENST00000589318	XAB2	Q9HCS7	855 aa	Known RBP	15.67	■□□□□ 0.1
DDX39A-209	ENST00000589318	EXOC1L	A0A1B0GW35	172 aa		15.66	■□□□□ 0.1
DDX39A-209	ENST00000589318	MAGEA13P	A6NCF6	341 aa		15.66	■□□□□ 0.1
DDX39A-209	ENST00000589318	TRAFD1	O14545	582 aa	Predicted RBP	15.66	■□□□□ 0.1
DDX39A-209	ENST00000589318	MATN3	O15232	486 aa		15.66	■□□□□ 0.1
DDX39A-209	ENST00000589318	PEX11B	O96011	259 aa		15.66	■□□□□ 0.1
DDX39A-209	ENST00000589318	C1QA	P02745	245 aa		15.66	■□□□□ 0.1
DDX39A-209	ENST00000589318	ADH1A	P07327	375 aa		15.66	■□□□□ 0.1
DDX39A-209	ENST00000589318	MLN	P12872	115 aa		15.66	■□□□□ 0.1
DDX39A-209	ENST00000589318	NFKB1	P19838	968 aa		15.66	■□□□□ 0.1
DDX39A-209	ENST00000589318	VHL	P40337	213 aa		15.66	■□□□□ 0.1
DDX39A-209	ENST00000589318	IFNAR2	P48551	515 aa		15.66	■□□□□ 0.1
DDX39A-209	ENST00000589318	OCRL	Q01968	901 aa		15.66	■□□□□ 0.1
DDX39A-209	ENST00000589318	MUM1	Q2TAK8	710 aa		15.66	■□□□□ 0.1
DDX39A-209	ENST00000589318	LRRC8B	Q6P9F7	803 aa		15.66	■□□□□ 0.1
DDX39A-209	ENST00000589318	RFWD3	Q6PCD5	774 aa		15.66	■□□□□ 0.1
DDX39A-209	ENST00000589318	ITIH5	Q86UX2	942 aa		15.66	■□□□□ 0.1
DDX39A-209	ENST00000589318	TDRP	Q86YL5	185 aa		15.66	■□□□□ 0.1
DDX39A-209	ENST00000589318	TMC8	Q8IU68	726 aa		15.66	■□□□□ 0.1
DDX39A-209	ENST00000589318	LRRC49	Q8IUZ0	686 aa		15.66	■□□□□ 0.1

Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms