RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 TARSL2A2RTX5 802 aaKnown RBP12.39□□□□□ -0.43
DNMT1-218ENST00000589294 KRIT1O00522 736 aa12.39□□□□□ -0.43
DNMT1-218ENST00000589294 LIASO43766 372 aa12.39□□□□□ -0.43
DNMT1-218ENST00000589294 CCNB1P14635 433 aa12.39□□□□□ -0.43
DNMT1-218ENST00000589294 HSPA9P38646 679 aaKnown RBP12.39□□□□□ -0.43
DNMT1-218ENST00000589294 STK19P49842 368 aaPredicted RBP12.39□□□□□ -0.43
DNMT1-218ENST00000589294 SEC13P55735 322 aa12.39□□□□□ -0.43
DNMT1-218ENST00000589294 IFI35P80217 286 aaPredicted RBP12.39□□□□□ -0.43
DNMT1-218ENST00000589294 BYSLQ13895 437 aaKnown RBP12.39□□□□□ -0.43
DNMT1-218ENST00000589294 LBRQ14739 615 aaKnown RBP12.39□□□□□ -0.43
DNMT1-218ENST00000589294 CYTH1Q15438 398 aa12.39□□□□□ -0.43
DNMT1-218ENST00000589294 DLG2Q15700 870 aa12.39□□□□□ -0.43
DNMT1-218ENST00000589294 HNRNPA1L2Q32P51 320 aaKnown RBP12.39□□□□□ -0.43
DNMT1-218ENST00000589294 ACCSLQ4AC99 568 aa12.39□□□□□ -0.43
DNMT1-218ENST00000589294 EOGTQ5NDL2 527 aa12.39□□□□□ -0.43
DNMT1-218ENST00000589294 DARS2Q6PI48 645 aaKnown RBP12.39□□□□□ -0.43
DNMT1-218ENST00000589294 SERPINA13PQ6UXR4 307 aa12.39□□□□□ -0.43
DNMT1-218ENST00000589294 ZC3H18Q86VM9 953 aaKnown RBP12.39□□□□□ -0.43
DNMT1-218ENST00000589294 CDKL3Q8IVW4 592 aaPredicted RBP12.39□□□□□ -0.43
DNMT1-218ENST00000589294 CCDC105Q8IYK2 499 aa12.39□□□□□ -0.43
DNMT1-218ENST00000589294 CCDC33Q8N5R6 958 aa12.39□□□□□ -0.43
DNMT1-218ENST00000589294 PCDH20Q8N6Y1 951 aaKnown RBP12.39□□□□□ -0.43
DNMT1-218ENST00000589294 IL17RCQ8NAC3 791 aa12.39□□□□□ -0.43
DNMT1-218ENST00000589294 FLCNQ8NFG4 579 aa12.39□□□□□ -0.43
DNMT1-218ENST00000589294 FRS2Q8WU20 508 aa12.39□□□□□ -0.43
DNMT1-218ENST00000589294 QKIQ96PU8 341 aaKnown RBP eCLIP12.39□□□□□ -0.43
DNMT1-218ENST00000589294 PSKH2Q96QS6 385 aa12.39□□□□□ -0.43
DNMT1-218ENST00000589294 VAT1Q99536 393 aa12.39□□□□□ -0.43
DNMT1-218ENST00000589294 GABRG3Q99928 467 aa12.39□□□□□ -0.43
DNMT1-218ENST00000589294 RBM12Q9NTZ6 932 aaKnown RBP12.39□□□□□ -0.43
DNMT1-218ENST00000589294 SEPT3Q9UH03 358 aa12.39□□□□□ -0.43
DNMT1-218ENST00000589294 FEZ2Q9UHY8 353 aaPredicted RBP12.39□□□□□ -0.43
DNMT1-218ENST00000589294 CDC23Q9UJX2 597 aa12.39□□□□□ -0.43
DNMT1-218ENST00000589294 MUC3AQ02505 3323 aa12.39□□□□□ -0.43
DNMT1-218ENST00000589294 EDDM13A0A1B0GTR0 161 aa12.38□□□□□ -0.43
DNMT1-218ENST00000589294 CFAP69A5D8W1 941 aa12.38□□□□□ -0.43
DNMT1-218ENST00000589294 K7ERQ8 282 aa12.38□□□□□ -0.43
DNMT1-218ENST00000589294 SMAD6O43541 496 aaKnown RBP12.38□□□□□ -0.43
DNMT1-218ENST00000589294 URI1O94763 535 aaPredicted RBP12.38□□□□□ -0.43
DNMT1-218ENST00000589294 KLF8O95600 359 aaPredicted RBP12.38□□□□□ -0.43
DNMT1-218ENST00000589294 JCHAINP01591 159 aa12.38□□□□□ -0.43
DNMT1-218ENST00000589294 ITGAVP06756 1048 aa12.38□□□□□ -0.43
DNMT1-218ENST00000589294 AOC1P19801 751 aa12.38□□□□□ -0.43
DNMT1-218ENST00000589294 CES1P23141 567 aa12.38□□□□□ -0.43
DNMT1-218ENST00000589294 IL12RB1P42701 662 aa12.38□□□□□ -0.43
DNMT1-218ENST00000589294 CSNK1DP48730 415 aa12.38□□□□□ -0.43
DNMT1-218ENST00000589294 NUMBP49757 651 aa12.38□□□□□ -0.43
DNMT1-218ENST00000589294 LMNB2Q03252 620 aa12.38□□□□□ -0.43
DNMT1-218ENST00000589294 SLC10A7Q0GE19 358 aa12.38□□□□□ -0.43
DNMT1-218ENST00000589294 OASLQ15646 514 aaKnown RBP12.38□□□□□ -0.43
DNMT1-218ENST00000589294 CYP1B1Q16678 543 aa12.38□□□□□ -0.43
DNMT1-218ENST00000589294 TEX44Q53QW1 395 aa12.38□□□□□ -0.43
DNMT1-218ENST00000589294 HEATR6Q6AI08 1181 aaKnown RBP12.38□□□□□ -0.43
DNMT1-218ENST00000589294 LEKR1Q6ZMV7 388 aa12.38□□□□□ -0.43
DNMT1-218ENST00000589294 SPEM1Q8N4L4 309 aa12.38□□□□□ -0.43
DNMT1-218ENST00000589294 ALLCQ8N6M5 410 aa12.38□□□□□ -0.43
DNMT1-218ENST00000589294 PRELID2Q8N945 189 aa12.38□□□□□ -0.43
DNMT1-218ENST00000589294 RPLP0P6Q8NHW5 317 aa12.38□□□□□ -0.43
DNMT1-218ENST00000589294 C1orf54Q8WWF1 131 aa12.38□□□□□ -0.43
DNMT1-218ENST00000589294 HTR3CQ8WXA8 447 aa12.38□□□□□ -0.43
DNMT1-218ENST00000589294 CAPZA3Q96KX2 299 aa12.38□□□□□ -0.43
DNMT1-218ENST00000589294 ACOX2Q99424 681 aa12.38□□□□□ -0.43
DNMT1-218ENST00000589294 IL12RB2Q99665 862 aa12.38□□□□□ -0.43
DNMT1-218ENST00000589294 CHRDQ9H2X0 955 aa12.38□□□□□ -0.43
DNMT1-218ENST00000589294 USP29Q9HBJ7 922 aa12.38□□□□□ -0.43
DNMT1-218ENST00000589294 RBM22Q9NW64 420 aaKnown RBP eCLIP12.38□□□□□ -0.43
DNMT1-218ENST00000589294 CACNA2D2Q9NY47 1150 aa12.38□□□□□ -0.43
DNMT1-218ENST00000589294 TRHDEQ9UKU6 1024 aa12.38□□□□□ -0.43
DNMT1-218ENST00000589294 DNPEPQ9ULA0 475 aa12.38□□□□□ -0.43
DNMT1-218ENST00000589294 MMP17Q9ULZ9 603 aa12.38□□□□□ -0.43
DNMT1-218ENST00000589294 FARP1Q9Y4F1 1045 aaPredicted RBP12.38□□□□□ -0.43
DNMT1-218ENST00000589294 MIA3Q5JRA6 1907 aa12.38□□□□□ -0.43
DNMT1-218ENST00000589294 ANTXRLA6NF34 631 aa12.37□□□□□ -0.43
DNMT1-218ENST00000589294 TTC34A8MYJ7 566 aa12.37□□□□□ -0.43
DNMT1-218ENST00000589294 WASH3PC4AMC7 463 aa12.37□□□□□ -0.43
DNMT1-218ENST00000589294 KCNK1O00180 336 aa12.37□□□□□ -0.43
DNMT1-218ENST00000589294 SYNCRIPO60506 623 aaKnown RBP12.37□□□□□ -0.43
DNMT1-218ENST00000589294 ADAM23O75077 832 aa12.37□□□□□ -0.43
DNMT1-218ENST00000589294 ZNF821O75541 412 aaPredicted RBP12.37□□□□□ -0.43
DNMT1-218ENST00000589294 STK10O94804 968 aaKnown RBP12.37□□□□□ -0.43
DNMT1-218ENST00000589294 TMCC1O94876 653 aa12.37□□□□□ -0.43
DNMT1-218ENST00000589294 GSRP00390 522 aa12.37□□□□□ -0.43
DNMT1-218ENST00000589294 RBL1P28749 1068 aa12.37□□□□□ -0.43
DNMT1-218ENST00000589294 MMP13P45452 471 aa12.37□□□□□ -0.43
DNMT1-218ENST00000589294 RECQLP46063 649 aaPredicted RBP12.37□□□□□ -0.43
DNMT1-218ENST00000589294 SNRPD1P62314 119 aaKnown RBP12.37□□□□□ -0.43
DNMT1-218ENST00000589294 CARD16Q5EG05 197 aa12.37□□□□□ -0.43
DNMT1-218ENST00000589294 RALGPS1Q5JS13 557 aa12.37□□□□□ -0.43
DNMT1-218ENST00000589294 C9orf64Q5T6V5 341 aa12.37□□□□□ -0.43
DNMT1-218ENST00000589294 SYT13Q7L8C5 426 aa12.37□□□□□ -0.43
DNMT1-218ENST00000589294 C12orf50Q8NA57 414 aaPredicted RBP12.37□□□□□ -0.43
DNMT1-218ENST00000589294 TXNDC5Q8NBS9 432 aaKnown RBP12.37□□□□□ -0.43
DNMT1-218ENST00000589294 ATL2Q8NHH9 583 aa12.37□□□□□ -0.43
DNMT1-218ENST00000589294 ATG4AQ8WYN0 398 aa12.37□□□□□ -0.43
DNMT1-218ENST00000589294 PTPRN2Q92932 1015 aa12.37□□□□□ -0.43
DNMT1-218ENST00000589294 MAGOHBQ96A72 148 aaKnown RBP12.37□□□□□ -0.43
DNMT1-218ENST00000589294 PBXIP1Q96AQ6 731 aa12.37□□□□□ -0.43
DNMT1-218ENST00000589294 CCDC114Q96M63 670 aa12.37□□□□□ -0.43
DNMT1-218ENST00000589294 FAM118BQ9BPY3 351 aa12.37□□□□□ -0.43
DNMT1-218ENST00000589294 CINPQ9BW66 212 aaPredicted RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms