RNA–Protein interactions for RNA: ENST00000588423.1

RETREG3-206, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-206ENST00000588423 C10orf142B7Z368 130 aa16.37■□□□□ 0.21
RETREG3-206ENST00000588423 H3BRJ5 948 aa16.37■□□□□ 0.21
RETREG3-206ENST00000588423 PROSCO94903 275 aa16.37■□□□□ 0.21
RETREG3-206ENST00000588423 PRNPP04156 253 aa16.37■□□□□ 0.21
RETREG3-206ENST00000588423 SERPINF2P08697 491 aa16.37■□□□□ 0.21
RETREG3-206ENST00000588423 RARAP10276 462 aa16.37■□□□□ 0.21
RETREG3-206ENST00000588423 GNSP15586 552 aa16.37■□□□□ 0.21
RETREG3-206ENST00000588423 TCF4P15884 667 aa16.37■□□□□ 0.21
RETREG3-206ENST00000588423 ERCC2P18074 760 aa16.37■□□□□ 0.21
RETREG3-206ENST00000588423 CHRNA3P32297 505 aa16.37■□□□□ 0.21
RETREG3-206ENST00000588423 MAN1A1P33908 653 aa16.37■□□□□ 0.21
RETREG3-206ENST00000588423 ARL4AP40617 200 aa16.37■□□□□ 0.21
RETREG3-206ENST00000588423 DPYSQ14117 519 aa16.37■□□□□ 0.21
RETREG3-206ENST00000588423 INO80DQ53TQ3 878 aaPredicted RBP16.37■□□□□ 0.21
RETREG3-206ENST00000588423 TRIM61Q5EBN2 209 aa16.37■□□□□ 0.21
RETREG3-206ENST00000588423 CARD16Q5EG05 197 aa16.37■□□□□ 0.21
RETREG3-206ENST00000588423 PPP6R3Q5H9R7 873 aaPredicted RBP16.37■□□□□ 0.21
RETREG3-206ENST00000588423 KCNT1Q5JUK3 1230 aa16.37■□□□□ 0.21
RETREG3-206ENST00000588423 AFMIDQ63HM1 303 aa16.37■□□□□ 0.21
RETREG3-206ENST00000588423 TCEAL6Q6IPX3 200 aa16.37■□□□□ 0.21
RETREG3-206ENST00000588423 CCDC170Q8IYT3 715 aa16.37■□□□□ 0.21
RETREG3-206ENST00000588423 RGL4Q8IZJ4 473 aa16.37■□□□□ 0.21
RETREG3-206ENST00000588423 LZTR1Q8N653 840 aa16.37■□□□□ 0.21
RETREG3-206ENST00000588423 OR2T34Q8NGX1 318 aa16.37■□□□□ 0.21
RETREG3-206ENST00000588423 TCEAL3Q969E4 200 aa16.37■□□□□ 0.21
RETREG3-206ENST00000588423 HMCESQ96FZ2 354 aa16.37■□□□□ 0.21
RETREG3-206ENST00000588423 PANX2Q96RD6 677 aa16.37■□□□□ 0.21
RETREG3-206ENST00000588423 KLC2Q9H0B6 622 aa16.37■□□□□ 0.21
RETREG3-206ENST00000588423 C6orf106Q9H6K1 298 aaPredicted RBP16.37■□□□□ 0.21
RETREG3-206ENST00000588423 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.37■□□□□ 0.21
RETREG3-206ENST00000588423 CDV3Q9UKY7 258 aaKnown RBP16.37■□□□□ 0.21
RETREG3-206ENST00000588423 SARDHQ9UL12 918 aa16.37■□□□□ 0.21
RETREG3-206ENST00000588423 ATXN2Q99700 1313 aaKnown RBP16.37■□□□□ 0.21
RETREG3-206ENST00000588423 RIF1Q5UIP0 2472 aaKnown RBP16.36■□□□□ 0.21
RETREG3-206ENST00000588423 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.36■□□□□ 0.21
RETREG3-206ENST00000588423 LNP1A1A4G5 178 aa16.36■□□□□ 0.21
RETREG3-206ENST00000588423 PATE3B3GLJ2 98 aa16.36■□□□□ 0.21
RETREG3-206ENST00000588423 BNIP3LO60238 219 aa16.36■□□□□ 0.21
RETREG3-206ENST00000588423 GDF9O60383 454 aa16.36■□□□□ 0.21
RETREG3-206ENST00000588423 MTA2O94776 668 aa16.36■□□□□ 0.21
RETREG3-206ENST00000588423 LCA5LO95447 670 aa16.36■□□□□ 0.21
RETREG3-206ENST00000588423 GSRP00390 522 aa16.36■□□□□ 0.21
RETREG3-206ENST00000588423 CTSLP07711 333 aa16.36■□□□□ 0.21
RETREG3-206ENST00000588423 FECHP22830 423 aa16.36■□□□□ 0.21
RETREG3-206ENST00000588423 ARHGAP25P42331 645 aa16.36■□□□□ 0.21
RETREG3-206ENST00000588423 ID4P47928 161 aa16.36■□□□□ 0.21
RETREG3-206ENST00000588423 IRX4P78413 519 aa16.36■□□□□ 0.21
RETREG3-206ENST00000588423 CCDC15Q0P6D6 951 aa16.36■□□□□ 0.21
RETREG3-206ENST00000588423 TCEAL1Q15170 157 aa16.36■□□□□ 0.21
RETREG3-206ENST00000588423 RSPO4Q2I0M5 234 aaPredicted RBP16.36■□□□□ 0.21
RETREG3-206ENST00000588423 SMTNL2Q2TAL5 461 aa16.36■□□□□ 0.21
RETREG3-206ENST00000588423 KIAA0895LQ68EN5 471 aa16.36■□□□□ 0.21
RETREG3-206ENST00000588423 DPY19L3Q6ZPD9 716 aa16.36■□□□□ 0.21
RETREG3-206ENST00000588423 POLNQ7Z5Q5 900 aa16.36■□□□□ 0.21
RETREG3-206ENST00000588423 ZNF354CQ86Y25 554 aa16.36■□□□□ 0.21
RETREG3-206ENST00000588423 SLC35G2Q8TBE7 412 aa16.36■□□□□ 0.21
RETREG3-206ENST00000588423 FAM71BQ8TC56 605 aa16.36■□□□□ 0.21
RETREG3-206ENST00000588423 HSPH1Q92598 858 aa16.36■□□□□ 0.21
RETREG3-206ENST00000588423 RMDN1Q96DB5 314 aa16.36■□□□□ 0.21
RETREG3-206ENST00000588423 TNKS2Q9H2K2 1166 aa16.36■□□□□ 0.21
RETREG3-206ENST00000588423 CAPN10Q9HC96 672 aa16.36■□□□□ 0.21
RETREG3-206ENST00000588423 OSGEPQ9NPF4 335 aa16.36■□□□□ 0.21
RETREG3-206ENST00000588423 RCOR3Q9P2K3 495 aaPredicted RBP16.36■□□□□ 0.21
RETREG3-206ENST00000588423 IL36AQ9UHA7 158 aa16.36■□□□□ 0.21
RETREG3-206ENST00000588423 SLC6A14Q9UN76 642 aa16.36■□□□□ 0.21
RETREG3-206ENST00000588423 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.36■□□□□ 0.21
RETREG3-206ENST00000588423 FCF1Q9Y324 198 aaKnown RBP16.36■□□□□ 0.21
RETREG3-206ENST00000588423 GVINP1Q7Z2Y8 2422 aa16.36■□□□□ 0.21
RETREG3-206ENST00000588423 A0A1B0GTW7 788 aa16.35■□□□□ 0.21
RETREG3-206ENST00000588423 ARHGAP42A6NI28 874 aa16.35■□□□□ 0.21
RETREG3-206ENST00000588423 SLC30A4O14863 429 aa16.35■□□□□ 0.21
RETREG3-206ENST00000588423 PLRG1O43660 514 aaKnown RBP16.35■□□□□ 0.21
RETREG3-206ENST00000588423 BUB1O43683 1085 aa16.35■□□□□ 0.21
RETREG3-206ENST00000588423 ADPRHP54922 357 aa16.35■□□□□ 0.21
RETREG3-206ENST00000588423 PUM1Q14671 1186 aaKnown RBP eCLIP16.35■□□□□ 0.21
RETREG3-206ENST00000588423 TXNRD3NBQ6F5E7 133 aa16.35■□□□□ 0.21
RETREG3-206ENST00000588423 CHST14Q8NCH0 376 aa16.35■□□□□ 0.21
RETREG3-206ENST00000588423 OR2AP1Q8NGE2 309 aa16.35■□□□□ 0.21
RETREG3-206ENST00000588423 RFFLQ8WZ73 363 aa16.35■□□□□ 0.21
RETREG3-206ENST00000588423 TSC1Q92574 1164 aa16.35■□□□□ 0.21
RETREG3-206ENST00000588423 BIRC7Q96CA5 298 aa16.35■□□□□ 0.21
RETREG3-206ENST00000588423 PPP1R16AQ96I34 528 aa16.35■□□□□ 0.21
RETREG3-206ENST00000588423 LRIG1Q96JA1 1093 aa16.35■□□□□ 0.21
RETREG3-206ENST00000588423 CSPG4P5Q96PW8 444 aa16.35■□□□□ 0.21
RETREG3-206ENST00000588423 HEPHQ9BQS7 1158 aa16.35■□□□□ 0.21
RETREG3-206ENST00000588423 RTKNQ9BST9 563 aa16.35■□□□□ 0.21
RETREG3-206ENST00000588423 EDEM2Q9BV94 578 aa16.35■□□□□ 0.21
RETREG3-206ENST00000588423 PDFQ9HBH1 243 aa16.35■□□□□ 0.21
RETREG3-206ENST00000588423 PCDH18Q9HCL0 1135 aa16.35■□□□□ 0.21
RETREG3-206ENST00000588423 RXFP3Q9NSD7 469 aa16.35■□□□□ 0.21
RETREG3-206ENST00000588423 ACTL7AQ9Y615 435 aa16.35■□□□□ 0.21
RETREG3-206ENST00000588423 NUP205Q92621 2012 aa16.35■□□□□ 0.21
RETREG3-206ENST00000588423 CFAP54Q96N23 3096 aa16.34■□□□□ 0.21
RETREG3-206ENST00000588423 EP300Q09472 2414 aaPredicted RBP16.34■□□□□ 0.21
RETREG3-206ENST00000588423 PRAMEF11O60813 436 aa16.34■□□□□ 0.21
RETREG3-206ENST00000588423 LEFTY1O75610 366 aa16.34■□□□□ 0.21
RETREG3-206ENST00000588423 TMCC1O94876 653 aa16.34■□□□□ 0.21
RETREG3-206ENST00000588423 MAOBP27338 520 aa16.34■□□□□ 0.21
RETREG3-206ENST00000588423 CCR5P51681 352 aa16.34■□□□□ 0.21
RETREG3-206ENST00000588423 CCNHP51946 323 aaPredicted RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms