RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 BNIP3LO60238 219 aa10.3□□□□□ -0.76
TPM4-207ENST00000588032 RNASEH2AO75792 299 aaKnown RBP10.3□□□□□ -0.76
TPM4-207ENST00000588032 IPO7O95373 1038 aaKnown RBP10.3□□□□□ -0.76
TPM4-207ENST00000588032 CD160O95971 181 aa10.3□□□□□ -0.76
TPM4-207ENST00000588032 SERPINF2P08697 491 aa10.3□□□□□ -0.76
TPM4-207ENST00000588032 FECHP22830 423 aa10.3□□□□□ -0.76
TPM4-207ENST00000588032 ITPKAP23677 461 aa10.3□□□□□ -0.76
TPM4-207ENST00000588032 SSR1P43307 286 aaKnown RBP10.3□□□□□ -0.76
TPM4-207ENST00000588032 MAGEA1P43355 309 aa10.3□□□□□ -0.76
TPM4-207ENST00000588032 PSMD8P48556 350 aa10.3□□□□□ -0.76
TPM4-207ENST00000588032 LIMK1P53667 647 aa10.3□□□□□ -0.76
TPM4-207ENST00000588032 SNRPD1P62314 119 aaKnown RBP10.3□□□□□ -0.76
TPM4-207ENST00000588032 SLC25A11Q02978 314 aaKnown RBP10.3□□□□□ -0.76
TPM4-207ENST00000588032 DPYSQ14117 519 aa10.3□□□□□ -0.76
TPM4-207ENST00000588032 PDK2Q15119 407 aa10.3□□□□□ -0.76
TPM4-207ENST00000588032 KCNT1Q5JUK3 1230 aa10.3□□□□□ -0.76
TPM4-207ENST00000588032 DCAF12L1Q5VU92 463 aa10.3□□□□□ -0.76
TPM4-207ENST00000588032 AFMIDQ63HM1 303 aa10.3□□□□□ -0.76
TPM4-207ENST00000588032 DPY19L3Q6ZPD9 716 aa10.3□□□□□ -0.76
TPM4-207ENST00000588032 ARMCX6Q7L4S7 300 aa10.3□□□□□ -0.76
TPM4-207ENST00000588032 POLNQ7Z5Q5 900 aa10.3□□□□□ -0.76
TPM4-207ENST00000588032 MAP7D3Q8IWC1 876 aa10.3□□□□□ -0.76
TPM4-207ENST00000588032 RGL4Q8IZJ4 473 aa10.3□□□□□ -0.76
TPM4-207ENST00000588032 DEFB119Q8N690 84 aa10.3□□□□□ -0.76
TPM4-207ENST00000588032 OR2T34Q8NGX1 318 aa10.3□□□□□ -0.76
TPM4-207ENST00000588032 PIP4K2CQ8TBX8 421 aa10.3□□□□□ -0.76
TPM4-207ENST00000588032 FAM71BQ8TC56 605 aa10.3□□□□□ -0.76
TPM4-207ENST00000588032 NETO1Q8TDF5 533 aa10.3□□□□□ -0.76
TPM4-207ENST00000588032 HSPH1Q92598 858 aa10.3□□□□□ -0.76
TPM4-207ENST00000588032 FAM131CQ96AQ9 280 aa10.3□□□□□ -0.76
TPM4-207ENST00000588032 HMCESQ96FZ2 354 aa10.3□□□□□ -0.76
TPM4-207ENST00000588032 PPP1R16AQ96I34 528 aa10.3□□□□□ -0.76
TPM4-207ENST00000588032 HEPHQ9BQS7 1158 aa10.3□□□□□ -0.76
TPM4-207ENST00000588032 NUSAP1Q9BXS6 441 aaKnown RBP10.3□□□□□ -0.76
TPM4-207ENST00000588032 LRRC19Q9H756 370 aa10.3□□□□□ -0.76
TPM4-207ENST00000588032 DYRK4Q9NR20 520 aa10.3□□□□□ -0.76
TPM4-207ENST00000588032 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.3□□□□□ -0.76
TPM4-207ENST00000588032 TMEM74BQ9NUR3 256 aa10.3□□□□□ -0.76
TPM4-207ENST00000588032 IL36AQ9UHA7 158 aa10.3□□□□□ -0.76
TPM4-207ENST00000588032 SLC6A14Q9UN76 642 aa10.3□□□□□ -0.76
TPM4-207ENST00000588032 WDFY4Q6ZS81 3184 aa10.3□□□□□ -0.76
TPM4-207ENST00000588032 GOLGA6L6A8MZA4 724 aa10.29□□□□□ -0.76
TPM4-207ENST00000588032 ZNF821O75541 412 aaPredicted RBP10.29□□□□□ -0.76
TPM4-207ENST00000588032 POP4O95707 220 aaKnown RBP10.29□□□□□ -0.76
TPM4-207ENST00000588032 GSRP00390 522 aa10.29□□□□□ -0.76
TPM4-207ENST00000588032 TCF4P15884 667 aa10.29□□□□□ -0.76
TPM4-207ENST00000588032 SERPINB6P35237 376 aa10.29□□□□□ -0.76
TPM4-207ENST00000588032 SLC1A1P43005 524 aa10.29□□□□□ -0.76
TPM4-207ENST00000588032 DNA2P51530 1060 aa10.29□□□□□ -0.76
TPM4-207ENST00000588032 HADHBP55084 474 aaKnown RBP10.29□□□□□ -0.76
TPM4-207ENST00000588032 IRX4P78413 519 aa10.29□□□□□ -0.76
TPM4-207ENST00000588032 RAD51Q06609 339 aa10.29□□□□□ -0.76
TPM4-207ENST00000588032 KRT81Q14533 505 aa10.29□□□□□ -0.76
TPM4-207ENST00000588032 MESDQ14696 234 aa10.29□□□□□ -0.76
TPM4-207ENST00000588032 RFTN1Q14699 578 aaPredicted RBP10.29□□□□□ -0.76
TPM4-207ENST00000588032 SF3A2Q15428 464 aaKnown RBP10.29□□□□□ -0.76
TPM4-207ENST00000588032 CCDC6Q16204 474 aa10.29□□□□□ -0.76
TPM4-207ENST00000588032 SMTNL2Q2TAL5 461 aa10.29□□□□□ -0.76
TPM4-207ENST00000588032 AASDHQ4L235 1098 aaPredicted RBP10.29□□□□□ -0.76
TPM4-207ENST00000588032 TRIM61Q5EBN2 209 aa10.29□□□□□ -0.76
TPM4-207ENST00000588032 DAB2IPQ5VWQ8 1189 aa10.29□□□□□ -0.76
TPM4-207ENST00000588032 KIAA0895LQ68EN5 471 aa10.29□□□□□ -0.76
TPM4-207ENST00000588032 TMCO3Q6UWJ1 677 aa10.29□□□□□ -0.76
TPM4-207ENST00000588032 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.29□□□□□ -0.76
TPM4-207ENST00000588032 LRRC49Q8IUZ0 686 aa10.29□□□□□ -0.76
TPM4-207ENST00000588032 AADATQ8N5Z0 425 aa10.29□□□□□ -0.76
TPM4-207ENST00000588032 KCTD6Q8NC69 237 aa10.29□□□□□ -0.76
TPM4-207ENST00000588032 OR2AP1Q8NGE2 309 aa10.29□□□□□ -0.76
TPM4-207ENST00000588032 TSC1Q92574 1164 aa10.29□□□□□ -0.76
TPM4-207ENST00000588032 CALR3Q96L12 384 aaKnown RBP10.29□□□□□ -0.76
TPM4-207ENST00000588032 CSPG4P5Q96PW8 444 aa10.29□□□□□ -0.76
TPM4-207ENST00000588032 SLC39A8Q9C0K1 460 aa10.29□□□□□ -0.76
TPM4-207ENST00000588032 KLC2Q9H0B6 622 aa10.29□□□□□ -0.76
TPM4-207ENST00000588032 TNKS2Q9H2K2 1166 aa10.29□□□□□ -0.76
TPM4-207ENST00000588032 PCDH18Q9HCL0 1135 aa10.29□□□□□ -0.76
TPM4-207ENST00000588032 OSGEPQ9NPF4 335 aa10.29□□□□□ -0.76
TPM4-207ENST00000588032 HECAQ9UBI9 543 aaPredicted RBP10.29□□□□□ -0.76
TPM4-207ENST00000588032 SARDHQ9UL12 918 aa10.29□□□□□ -0.76
TPM4-207ENST00000588032 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.29□□□□□ -0.76
TPM4-207ENST00000588032 FCF1Q9Y324 198 aaKnown RBP10.29□□□□□ -0.76
TPM4-207ENST00000588032 PCDHA13Q9Y5I0 950 aa10.29□□□□□ -0.76
TPM4-207ENST00000588032 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.29□□□□□ -0.76
TPM4-207ENST00000588032 EPN1Q9Y6I3 576 aaPredicted RBP10.29□□□□□ -0.76
TPM4-207ENST00000588032 A0A0A6YYK5 440 aaPredicted RBP10.28□□□□□ -0.76
TPM4-207ENST00000588032 A0A1B0GTW7 788 aa10.28□□□□□ -0.76
TPM4-207ENST00000588032 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.28□□□□□ -0.76
TPM4-207ENST00000588032 KPNA3O00505 521 aaPredicted RBP10.28□□□□□ -0.76
TPM4-207ENST00000588032 BCAT2O15382 392 aaPredicted RBP10.28□□□□□ -0.76
TPM4-207ENST00000588032 PRAMEF11O60813 436 aa10.28□□□□□ -0.76
TPM4-207ENST00000588032 CFIP05156 583 aa10.28□□□□□ -0.76
TPM4-207ENST00000588032 CTSLP07711 333 aa10.28□□□□□ -0.76
TPM4-207ENST00000588032 SYPP08247 313 aa10.28□□□□□ -0.76
TPM4-207ENST00000588032 AMPD1P23109 780 aa10.28□□□□□ -0.76
TPM4-207ENST00000588032 CD27P26842 260 aa10.28□□□□□ -0.76
TPM4-207ENST00000588032 DRD3P35462 400 aa10.28□□□□□ -0.76
TPM4-207ENST00000588032 NUDT1P36639 197 aa10.28□□□□□ -0.76
TPM4-207ENST00000588032 PAPOLAP51003 745 aaKnown RBP10.28□□□□□ -0.76
TPM4-207ENST00000588032 CCR5P51681 352 aa10.28□□□□□ -0.76
TPM4-207ENST00000588032 ARSEP51690 589 aa10.28□□□□□ -0.76
TPM4-207ENST00000588032 CCNHP51946 323 aaPredicted RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms