RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 CHST14Q8NCH0 376 aa18.07■□□□□ 0.48
TPM4-206ENST00000587201 TMIEQ8NEW7 156 aa18.07■□□□□ 0.48
TPM4-206ENST00000587201 ARHGEF2Q92974 986 aaKnown RBP18.07■□□□□ 0.48
TPM4-206ENST00000587201 SKA1Q96BD8 255 aa18.07■□□□□ 0.48
TPM4-206ENST00000587201 ACE2Q9BYF1 805 aaPredicted RBP18.07■□□□□ 0.48
TPM4-206ENST00000587201 CEP44Q9C0F1 390 aa18.07■□□□□ 0.48
TPM4-206ENST00000587201 MAGEH1Q9H213 219 aa18.07■□□□□ 0.48
TPM4-206ENST00000587201 IL36AQ9UHA7 158 aa18.07■□□□□ 0.48
TPM4-206ENST00000587201 FZD10Q9ULW2 581 aa18.07■□□□□ 0.48
TPM4-206ENST00000587201 NEU3Q9UQ49 428 aa18.07■□□□□ 0.48
TPM4-206ENST00000587201 FCF1Q9Y324 198 aaKnown RBP18.07■□□□□ 0.48
TPM4-206ENST00000587201 KCNK3O14649 394 aa18.06■□□□□ 0.48
TPM4-206ENST00000587201 ATMINO43313 823 aaPredicted RBP18.06■□□□□ 0.48
TPM4-206ENST00000587201 CREB3O43889 395 aa18.06■□□□□ 0.48
TPM4-206ENST00000587201 RAMP2O60895 175 aa18.06■□□□□ 0.48
TPM4-206ENST00000587201 FTLP02792 175 aaPredicted RBP18.06■□□□□ 0.48
TPM4-206ENST00000587201 GZMAP12544 262 aa18.06■□□□□ 0.48
TPM4-206ENST00000587201 SKILP12757 684 aa18.06■□□□□ 0.48
TPM4-206ENST00000587201 PSMA2P25787 234 aa18.06■□□□□ 0.48
TPM4-206ENST00000587201 EPHB2P29323 1055 aa18.06■□□□□ 0.48
TPM4-206ENST00000587201 AIF1P55008 147 aa18.06■□□□□ 0.48
TPM4-206ENST00000587201 FAM193AP78312 1265 aa18.06■□□□□ 0.48
TPM4-206ENST00000587201 SHC2P98077 582 aa18.06■□□□□ 0.48
TPM4-206ENST00000587201 OGDHQ02218 1023 aa18.06■□□□□ 0.48
TPM4-206ENST00000587201 CCDC15Q0P6D6 951 aa18.06■□□□□ 0.48
TPM4-206ENST00000587201 POLD3Q15054 466 aaPredicted RBP18.06■□□□□ 0.48
TPM4-206ENST00000587201 ARSIQ5FYB1 569 aa18.06■□□□□ 0.48
TPM4-206ENST00000587201 FIGNQ5HY92 759 aa18.06■□□□□ 0.48
TPM4-206ENST00000587201 PLEKHA7Q6IQ23 1121 aa18.06■□□□□ 0.48
TPM4-206ENST00000587201 DPY19L3Q6ZPD9 716 aa18.06■□□□□ 0.48
TPM4-206ENST00000587201 TMC6Q7Z403 805 aa18.06■□□□□ 0.48
TPM4-206ENST00000587201 PRPF39Q86UA1 669 aaKnown RBP18.06■□□□□ 0.48
TPM4-206ENST00000587201 ZNF354CQ86Y25 554 aa18.06■□□□□ 0.48
TPM4-206ENST00000587201 PCDH20Q8N6Y1 951 aaKnown RBP18.06■□□□□ 0.48
TPM4-206ENST00000587201 GRIN3AQ8TCU5 1115 aa18.06■□□□□ 0.48
TPM4-206ENST00000587201 SETD7Q8WTS6 366 aaKnown RBP18.06■□□□□ 0.48
TPM4-206ENST00000587201 ARRDC3Q96B67 414 aa18.06■□□□□ 0.48
TPM4-206ENST00000587201 SERAC1Q96JX3 654 aa18.06■□□□□ 0.48
TPM4-206ENST00000587201 HPCAL4Q9UM19 191 aa18.06■□□□□ 0.48
TPM4-206ENST00000587201 ACTL7AQ9Y615 435 aa18.06■□□□□ 0.48
TPM4-206ENST00000587201 C10orf142B7Z368 130 aa18.05■□□□□ 0.48
TPM4-206ENST00000587201 DDX3XO00571 662 aaKnown RBP eCLIP18.05■□□□□ 0.483e-12■■■■□ 25.2
TPM4-206ENST00000587201 VILLO15195 856 aa18.05■□□□□ 0.48
TPM4-206ENST00000587201 ZNF821O75541 412 aaPredicted RBP18.05■□□□□ 0.48
TPM4-206ENST00000587201 CD38P28907 300 aa18.05■□□□□ 0.48
TPM4-206ENST00000587201 MAT2AP31153 395 aaKnown RBP18.05■□□□□ 0.48
TPM4-206ENST00000587201 CTSKP43235 329 aa18.05■□□□□ 0.48
TPM4-206ENST00000587201 SUZ12Q15022 739 aaKnown RBP18.05■□□□□ 0.48
TPM4-206ENST00000587201 TRIP6Q15654 476 aaKnown RBP18.05■□□□□ 0.48
TPM4-206ENST00000587201 TDRD12Q587J7 1177 aaKnown RBP18.05■□□□□ 0.48
TPM4-206ENST00000587201 CARD16Q5EG05 197 aa18.05■□□□□ 0.48
TPM4-206ENST00000587201 KCNT1Q5JUK3 1230 aa18.05■□□□□ 0.48
TPM4-206ENST00000587201 RTL3Q8N8U3 475 aaKnown RBP18.05■□□□□ 0.48
TPM4-206ENST00000587201 PPP1R16AQ96I34 528 aa18.05■□□□□ 0.48
TPM4-206ENST00000587201 EPAS1Q99814 870 aa18.05■□□□□ 0.48
TPM4-206ENST00000587201 CNOT8Q9UFF9 292 aaKnown RBP18.05■□□□□ 0.48
TPM4-206ENST00000587201 PLXNA2O75051 1894 aa18.04■□□□□ 0.48
TPM4-206ENST00000587201 CXorf51AA0A1B0GTR3 108 aa18.04■□□□□ 0.48
TPM4-206ENST00000587201 H0Y8X5 98 aa18.04■□□□□ 0.48
TPM4-206ENST00000587201 LATO43561 262 aa18.04■□□□□ 0.48
TPM4-206ENST00000587201 LEFTY1O75610 366 aa18.04■□□□□ 0.48
TPM4-206ENST00000587201 CD160O95971 181 aa18.04■□□□□ 0.48
TPM4-206ENST00000587201 WNT1P04628 370 aa18.04■□□□□ 0.48
TPM4-206ENST00000587201 GEMIN4P57678 1058 aaKnown RBP18.04■□□□□ 0.48
TPM4-206ENST00000587201 ZSCAN23Q3MJ62 389 aa18.04■□□□□ 0.48
TPM4-206ENST00000587201 SLC45A4Q5BKX6 768 aa18.04■□□□□ 0.48
TPM4-206ENST00000587201 PIP5KL1Q5T9C9 394 aa18.04■□□□□ 0.48
TPM4-206ENST00000587201 NAPEPLDQ6IQ20 393 aa18.04■□□□□ 0.48
TPM4-206ENST00000587201 TRIM69Q86WT6 500 aa18.04■□□□□ 0.48
TPM4-206ENST00000587201 ZNF653Q96CK0 615 aa18.04■□□□□ 0.48
TPM4-206ENST00000587201 HEPHQ9BQS7 1158 aa18.04■□□□□ 0.48
TPM4-206ENST00000587201 TM6SF2Q9BZW4 377 aa18.04■□□□□ 0.48
TPM4-206ENST00000587201 CATSPERBQ9H7T0 1116 aa18.04■□□□□ 0.48
TPM4-206ENST00000587201 PREBQ9HCU5 417 aa18.04■□□□□ 0.48
TPM4-206ENST00000587201 ARHGAP20Q9P2F6 1191 aa18.04■□□□□ 0.48
TPM4-206ENST00000587201 PCOLCE2Q9UKZ9 415 aa18.04■□□□□ 0.48
TPM4-206ENST00000587201 PCDHGB2Q9Y5G2 931 aa18.04■□□□□ 0.48
TPM4-206ENST00000587201 WASF2Q9Y6W5 498 aa18.04■□□□□ 0.48
TPM4-206ENST00000587201 A0A1W2PQJ5 194 aa18.03■□□□□ 0.48
TPM4-206ENST00000587201 A0A1W2PR77 199 aa18.03■□□□□ 0.48
TPM4-206ENST00000587201 RNF103O00237 685 aa18.03■□□□□ 0.48
TPM4-206ENST00000587201 WNT9AO14904 365 aa18.03■□□□□ 0.48
TPM4-206ENST00000587201 FLRT2O43155 660 aa18.03■□□□□ 0.48
TPM4-206ENST00000587201 NUDT1P36639 197 aa18.03■□□□□ 0.48
TPM4-206ENST00000587201 PBX1P40424 430 aa18.03■□□□□ 0.48
TPM4-206ENST00000587201 CCT8P50990 548 aa18.03■□□□□ 0.48
TPM4-206ENST00000587201 CCNHP51946 323 aaPredicted RBP18.03■□□□□ 0.48
TPM4-206ENST00000587201 TAS2R38P59533 333 aa18.03■□□□□ 0.48
TPM4-206ENST00000587201 ZNF423Q2M1K9 1284 aa18.03■□□□□ 0.48
TPM4-206ENST00000587201 SKOR2Q2VWA4 1001 aaPredicted RBP18.03■□□□□ 0.48
TPM4-206ENST00000587201 LEKR1Q6ZMV7 388 aa18.03■□□□□ 0.48
TPM4-206ENST00000587201 ERN2Q76MJ5 926 aaKnown RBP18.03■□□□□ 0.48
TPM4-206ENST00000587201 RYBPQ8N488 228 aaPredicted RBP18.03■□□□□ 0.48
TPM4-206ENST00000587201 RHBDD1Q8TEB9 315 aa18.03■□□□□ 0.48
TPM4-206ENST00000587201 CPLX3Q8WVH0 158 aa18.03■□□□□ 0.48
TPM4-206ENST00000587201 ISG20Q96AZ6 181 aaKnown RBP18.03■□□□□ 0.48
TPM4-206ENST00000587201 TRIM11Q96F44 468 aa18.03■□□□□ 0.48
TPM4-206ENST00000587201 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.03■□□□□ 0.48
TPM4-206ENST00000587201 ZDHHC6Q9H6R6 413 aa18.03■□□□□ 0.48
TPM4-206ENST00000587201 GPATCH2LQ9NWQ4 482 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms