RNA–Protein interactions for RNA: ENST00000586796.1

RETREG3-204, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-204ENST00000586796 FTCDO95954 541 aa21.85■■□□□ 1.09
RETREG3-204ENST00000586796 BCKDHBP21953 392 aa21.85■■□□□ 1.09
RETREG3-204ENST00000586796 P2RY2P41231 377 aa21.85■■□□□ 1.09
RETREG3-204ENST00000586796 BYSLQ13895 437 aaKnown RBP21.85■■□□□ 1.09
RETREG3-204ENST00000586796 POM121L1PQ3SYA9 428 aa21.85■■□□□ 1.09
RETREG3-204ENST00000586796 PEX26Q7Z412 305 aa21.85■■□□□ 1.09
RETREG3-204ENST00000586796 SYCE1Q8N0S2 351 aa21.85■■□□□ 1.09
RETREG3-204ENST00000586796 PCDH20Q8N6Y1 951 aaKnown RBP21.85■■□□□ 1.09
RETREG3-204ENST00000586796 OR2A12Q8NGT7 310 aa21.85■■□□□ 1.09
RETREG3-204ENST00000586796 CEP44Q9C0F1 390 aa21.85■■□□□ 1.09
RETREG3-204ENST00000586796 AMFRQ9UKV5 643 aa21.85■■□□□ 1.09
RETREG3-204ENST00000586796 CAPN6Q9Y6Q1 641 aa21.85■■□□□ 1.09
RETREG3-204ENST00000586796 CKAP5Q14008 2032 aa21.84■■□□□ 1.09
RETREG3-204ENST00000586796 MCF2LO15068 1137 aa21.84■■□□□ 1.09
RETREG3-204ENST00000586796 MID1O15344 667 aa21.84■■□□□ 1.09
RETREG3-204ENST00000586796 ZRANB2O95218 330 aaKnown RBP eCLIP21.84■■□□□ 1.09
RETREG3-204ENST00000586796 TPMTP51580 245 aa21.84■■□□□ 1.09
RETREG3-204ENST00000586796 DYNLT1P63172 113 aa21.84■■□□□ 1.09
RETREG3-204ENST00000586796 PAFAH1B3Q15102 231 aaKnown RBP21.84■■□□□ 1.09
RETREG3-204ENST00000586796 CST6Q15828 149 aa21.84■■□□□ 1.09
RETREG3-204ENST00000586796 CARD16Q5EG05 197 aa21.84■■□□□ 1.09
RETREG3-204ENST00000586796 KAZNQ674X7 775 aa21.84■■□□□ 1.09
RETREG3-204ENST00000586796 DPY19L3Q6ZPD9 716 aa21.84■■□□□ 1.09
RETREG3-204ENST00000586796 DSG4Q86SJ6 1040 aa21.84■■□□□ 1.09
RETREG3-204ENST00000586796 NT5DC3Q86UY8 548 aa21.84■■□□□ 1.09
RETREG3-204ENST00000586796 KBTBD6Q86V97 674 aa21.84■■□□□ 1.09
RETREG3-204ENST00000586796 KATNAL2Q8IYT4 538 aa21.84■■□□□ 1.09
RETREG3-204ENST00000586796 RCOR2Q8IZ40 523 aa21.84■■□□□ 1.09
RETREG3-204ENST00000586796 ATPAF2Q8N5M1 289 aa21.84■■□□□ 1.09
RETREG3-204ENST00000586796 RNF10Q8N5U6 811 aaKnown RBP21.84■■□□□ 1.09
RETREG3-204ENST00000586796 DEFB119Q8N690 84 aa21.84■■□□□ 1.09
RETREG3-204ENST00000586796 CHST14Q8NCH0 376 aa21.84■■□□□ 1.09
RETREG3-204ENST00000586796 OR6K2Q8NGY2 324 aa21.84■■□□□ 1.09
RETREG3-204ENST00000586796 KCNF1Q9H3M0 494 aa21.84■■□□□ 1.09
RETREG3-204ENST00000586796 PDFQ9HBH1 243 aa21.84■■□□□ 1.09
RETREG3-204ENST00000586796 ITM2CQ9NQX7 267 aa21.84■■□□□ 1.09
RETREG3-204ENST00000586796 MBD1Q9UIS9 605 aaPredicted RBP21.84■■□□□ 1.09
RETREG3-204ENST00000586796 PACSIN2Q9UNF0 486 aaPredicted RBP21.84■■□□□ 1.09
RETREG3-204ENST00000586796 PPP2R2CQ9Y2T4 447 aa21.84■■□□□ 1.09
RETREG3-204ENST00000586796 IGHV1OR15-9A0A0B4J2B8 117 aa21.83■■□□□ 1.09
RETREG3-204ENST00000586796 CXorf51AA0A1B0GTR3 108 aa21.83■■□□□ 1.09
RETREG3-204ENST00000586796 APOL1O14791 398 aa21.83■■□□□ 1.09
RETREG3-204ENST00000586796 KRT10P13645 584 aa21.83■■□□□ 1.09
RETREG3-204ENST00000586796 CHRNA3P32297 505 aa21.83■■□□□ 1.09
RETREG3-204ENST00000586796 SLC8A1P32418 973 aa21.83■■□□□ 1.09
RETREG3-204ENST00000586796 CTNNA1P35221 906 aaKnown RBP21.83■■□□□ 1.09
RETREG3-204ENST00000586796 CDKN2BP42772 138 aa21.83■■□□□ 1.09
RETREG3-204ENST00000586796 RHOAP61586 193 aa21.83■■□□□ 1.09
RETREG3-204ENST00000586796 GBE1Q04446 702 aa21.83■■□□□ 1.09
RETREG3-204ENST00000586796 IL10RBQ08334 325 aa21.83■■□□□ 1.09
RETREG3-204ENST00000586796 CYTH1Q15438 398 aa21.83■■□□□ 1.09
RETREG3-204ENST00000586796 TTC31Q49AM3 519 aaPredicted RBP21.83■■□□□ 1.09
RETREG3-204ENST00000586796 INO80DQ53TQ3 878 aaPredicted RBP21.83■■□□□ 1.09
RETREG3-204ENST00000586796 ATXN7L2Q5T6C5 722 aaPredicted RBP21.83■■□□□ 1.09
RETREG3-204ENST00000586796 SPOCD1Q6ZMY3 1216 aa21.83■■□□□ 1.09
RETREG3-204ENST00000586796 GRIN3AQ8TCU5 1115 aa21.83■■□□□ 1.09
RETREG3-204ENST00000586796 LRRN4Q8WUT4 740 aa21.83■■□□□ 1.09
RETREG3-204ENST00000586796 NKD2Q969F2 451 aaPredicted RBP21.83■■□□□ 1.09
RETREG3-204ENST00000586796 EPC1Q9H2F5 836 aa21.83■■□□□ 1.09
RETREG3-204ENST00000586796 PABPC3Q9H361 631 aaKnown RBP21.83■■□□□ 1.09
RETREG3-204ENST00000586796 USP36Q9P275 1121 aaKnown RBP21.83■■□□□ 1.09
RETREG3-204ENST00000586796 HECAQ9UBI9 543 aaPredicted RBP21.83■■□□□ 1.09
RETREG3-204ENST00000586796 SARDHQ9UL12 918 aa21.83■■□□□ 1.09
RETREG3-204ENST00000586796 RAB23Q9ULC3 237 aa21.83■■□□□ 1.09
RETREG3-204ENST00000586796 PCDHA3Q9Y5H8 950 aa21.83■■□□□ 1.09
RETREG3-204ENST00000586796 HEY1Q9Y5J3 304 aa21.83■■□□□ 1.09
RETREG3-204ENST00000586796 CTNNA2P26232 953 aa21.82■■□□□ 1.08
RETREG3-204ENST00000586796 GKP32189 559 aa21.82■■□□□ 1.08
RETREG3-204ENST00000586796 CCNHP51946 323 aaPredicted RBP21.82■■□□□ 1.08
RETREG3-204ENST00000586796 METAP1P53582 386 aa21.82■■□□□ 1.08
RETREG3-204ENST00000586796 ZBTB16Q05516 673 aa21.82■■□□□ 1.08
RETREG3-204ENST00000586796 ARSIQ5FYB1 569 aa21.82■■□□□ 1.08
RETREG3-204ENST00000586796 METTL3Q86U44 580 aaKnown RBP21.82■■□□□ 1.08
RETREG3-204ENST00000586796 EXD1Q8NHP7 514 aa21.82■■□□□ 1.08
RETREG3-204ENST00000586796 PIP4K2CQ8TBX8 421 aa21.82■■□□□ 1.08
RETREG3-204ENST00000586796 CASKIN2Q8WXE0 1202 aa21.82■■□□□ 1.08
RETREG3-204ENST00000586796 ISG20Q96AZ6 181 aaKnown RBP21.82■■□□□ 1.08
RETREG3-204ENST00000586796 EXOC2Q96KP1 924 aa21.82■■□□□ 1.08
RETREG3-204ENST00000586796 OMDQ99983 421 aa21.82■■□□□ 1.08
RETREG3-204ENST00000586796 IL36AQ9UHA7 158 aa21.82■■□□□ 1.08
RETREG3-204ENST00000586796 SMG5Q9UPR3 1016 aaKnown RBP21.82■■□□□ 1.08
RETREG3-204ENST00000586796 CHD5Q8TDI0 1954 aa21.81■■□□□ 1.08
RETREG3-204ENST00000586796 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa21.81■■□□□ 1.08
RETREG3-204ENST00000586796 A0A1W2PP55 124 aa21.81■■□□□ 1.08
RETREG3-204ENST00000586796 CCDC66A2RUB6 948 aa21.81■■□□□ 1.08
RETREG3-204ENST00000586796 ZNF487B1APH4 448 aa21.81■■□□□ 1.08
RETREG3-204ENST00000586796 C1QTNF3-AMACRE9PGA6 284 aa21.81■■□□□ 1.08
RETREG3-204ENST00000586796 PLK4O00444 970 aa21.81■■□□□ 1.08
RETREG3-204ENST00000586796 ALOX15BO15296 676 aa21.81■■□□□ 1.08
RETREG3-204ENST00000586796 NDUFS2O75306 463 aa21.81■■□□□ 1.08
RETREG3-204ENST00000586796 RNASEH2AO75792 299 aaKnown RBP21.81■■□□□ 1.08
RETREG3-204ENST00000586796 ADH1BP00325 375 aa21.81■■□□□ 1.08
RETREG3-204ENST00000586796 CTSLP07711 333 aa21.81■■□□□ 1.08
RETREG3-204ENST00000586796 CD6P30203 668 aa21.81■■□□□ 1.08
RETREG3-204ENST00000586796 RWDD2BP57060 319 aa21.81■■□□□ 1.08
RETREG3-204ENST00000586796 SNRPD1P62314 119 aaKnown RBP21.81■■□□□ 1.08
RETREG3-204ENST00000586796 RPL6Q02878 288 aaKnown RBP21.81■■□□□ 1.08
RETREG3-204ENST00000586796 SLC10A2Q12908 348 aaPredicted RBP21.81■■□□□ 1.08
RETREG3-204ENST00000586796 NPNTQ6UXI9 565 aa21.81■■□□□ 1.08
RETREG3-204ENST00000586796 VSIG1Q86XK7 387 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms