RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 USP27XA6NNY8 438 aa19.51■□□□□ 0.71
DDX39A-204ENST00000586558 RNASEH1O60930 286 aaKnown RBP19.51■□□□□ 0.71
DDX39A-204ENST00000586558 TMCC1O94876 653 aa19.51■□□□□ 0.71
DDX39A-204ENST00000586558 TJP3O95049 919 aa19.51■□□□□ 0.71
DDX39A-204ENST00000586558 GABRG2P18507 467 aa19.51■□□□□ 0.71
DDX39A-204ENST00000586558 RECQLP46063 649 aaPredicted RBP19.51■□□□□ 0.71
DDX39A-204ENST00000586558 DNA2P51530 1060 aa19.51■□□□□ 0.71
DDX39A-204ENST00000586558 ZBTB16Q05516 673 aa19.51■□□□□ 0.71
DDX39A-204ENST00000586558 ZNF33AQ06730 810 aa19.51■□□□□ 0.71
DDX39A-204ENST00000586558 SLC10A2Q12908 348 aaPredicted RBP19.51■□□□□ 0.71
DDX39A-204ENST00000586558 PDK1Q15118 436 aa19.51■□□□□ 0.71
DDX39A-204ENST00000586558 HS1BP3Q53T59 392 aa19.51■□□□□ 0.71
DDX39A-204ENST00000586558 TIGD7Q6NT04 549 aaPredicted RBP19.51■□□□□ 0.71
DDX39A-204ENST00000586558 ARHGAP36Q6ZRI8 547 aa19.51■□□□□ 0.71
DDX39A-204ENST00000586558 NETO2Q8NC67 525 aa19.51■□□□□ 0.71
DDX39A-204ENST00000586558 NSMCE1Q8WV22 266 aa19.51■□□□□ 0.71
DDX39A-204ENST00000586558 HMGB4Q8WW32 186 aa19.51■□□□□ 0.71
DDX39A-204ENST00000586558 OR8D1Q8WZ84 308 aa19.51■□□□□ 0.71
DDX39A-204ENST00000586558 NELL1Q92832 810 aa19.51■□□□□ 0.71
DDX39A-204ENST00000586558 HDAC11Q96DB2 347 aa19.51■□□□□ 0.71
DDX39A-204ENST00000586558 OLFM3Q96PB7 478 aa19.51■□□□□ 0.71
DDX39A-204ENST00000586558 HEMGNQ9BXL5 484 aa19.51■□□□□ 0.71
DDX39A-204ENST00000586558 TLR10Q9BXR5 811 aa19.51■□□□□ 0.71
DDX39A-204ENST00000586558 IRF2BPLQ9H1B7 796 aa19.51■□□□□ 0.71
DDX39A-204ENST00000586558 RSPH9Q9H1X1 276 aaPredicted RBP19.51■□□□□ 0.71
DDX39A-204ENST00000586558 MTG2Q9H4K7 406 aa19.51■□□□□ 0.71
DDX39A-204ENST00000586558 BCCIPQ9P287 314 aaKnown RBP eCLIP19.51■□□□□ 0.71
DDX39A-204ENST00000586558 FCF1Q9Y324 198 aaKnown RBP19.51■□□□□ 0.71
DDX39A-204ENST00000586558 MYO18AQ92614 2054 aaKnown RBP19.51■□□□□ 0.71
DDX39A-204ENST00000586558 ATG2BQ96BY7 2078 aa19.5■□□□□ 0.71
DDX39A-204ENST00000586558 APOC4-APOC2K7ER74 178 aa19.5■□□□□ 0.71
DDX39A-204ENST00000586558 PPP1R12AO14974 1030 aaPredicted RBP19.5■□□□□ 0.71
DDX39A-204ENST00000586558 GSRP00390 522 aa19.5■□□□□ 0.71
DDX39A-204ENST00000586558 APOC2P02655 101 aa19.5■□□□□ 0.71
DDX39A-204ENST00000586558 SP9P0CG40 484 aa19.5■□□□□ 0.71
DDX39A-204ENST00000586558 VAV1P15498 845 aa19.5■□□□□ 0.71
DDX39A-204ENST00000586558 NDUFV2P19404 249 aa19.5■□□□□ 0.71
DDX39A-204ENST00000586558 CCNCP24863 283 aa19.5■□□□□ 0.71
DDX39A-204ENST00000586558 COPAP53621 1224 aa19.5■□□□□ 0.71
DDX39A-204ENST00000586558 ZNF569Q5MCW4 686 aa19.5■□□□□ 0.71
DDX39A-204ENST00000586558 SEL1L2Q5TEA6 688 aa19.5■□□□□ 0.71
DDX39A-204ENST00000586558 DCAF12L1Q5VU92 463 aa19.5■□□□□ 0.71
DDX39A-204ENST00000586558 ZNF776Q68DI1 518 aaPredicted RBP19.5■□□□□ 0.71
DDX39A-204ENST00000586558 TSSK4Q6SA08 328 aa19.5■□□□□ 0.71
DDX39A-204ENST00000586558 LEKR1Q6ZMV7 388 aa19.5■□□□□ 0.71
DDX39A-204ENST00000586558 TMPRSS6Q8IU80 811 aa19.5■□□□□ 0.71
DDX39A-204ENST00000586558 MDGA1Q8NFP4 955 aa19.5■□□□□ 0.71
DDX39A-204ENST00000586558 OR2A12Q8NGT7 310 aa19.5■□□□□ 0.71
DDX39A-204ENST00000586558 P3H4Q92791 437 aa19.5■□□□□ 0.71
DDX39A-204ENST00000586558 MRGPRX1Q96LB2 322 aa19.5■□□□□ 0.71
DDX39A-204ENST00000586558 MKRN2Q9H000 416 aaKnown RBP19.5■□□□□ 0.71
DDX39A-204ENST00000586558 CKAP5Q14008 2032 aa19.5■□□□□ 0.71
DDX39A-204ENST00000586558 CACNA1IQ9P0X4 2223 aa19.49■□□□□ 0.71
DDX39A-204ENST00000586558 MCF2LO15068 1137 aa19.49■□□□□ 0.71
DDX39A-204ENST00000586558 AXIN1O15169 862 aa19.49■□□□□ 0.71
DDX39A-204ENST00000586558 ZNF821O75541 412 aaPredicted RBP19.49■□□□□ 0.71
DDX39A-204ENST00000586558 HSPA9P38646 679 aaKnown RBP19.49■□□□□ 0.71
DDX39A-204ENST00000586558 RHOAP61586 193 aa19.49■□□□□ 0.71
DDX39A-204ENST00000586558 SNRPD1P62314 119 aaKnown RBP19.49■□□□□ 0.71
DDX39A-204ENST00000586558 ADCY2Q08462 1091 aa19.49■□□□□ 0.71
DDX39A-204ENST00000586558 PPIDQ08752 370 aaKnown RBP19.49■□□□□ 0.71
DDX39A-204ENST00000586558 ZNF211Q13398 564 aaPredicted RBP19.49■□□□□ 0.71
DDX39A-204ENST00000586558 LLGL1Q15334 1064 aa19.49■□□□□ 0.71
DDX39A-204ENST00000586558 CARD16Q5EG05 197 aa19.49■□□□□ 0.71
DDX39A-204ENST00000586558 CCDC181Q5TID7 509 aa19.49■□□□□ 0.71
DDX39A-204ENST00000586558 WDR5BQ86VZ2 330 aa19.49■□□□□ 0.71
DDX39A-204ENST00000586558 LONP2Q86WA8 852 aa19.49■□□□□ 0.71
DDX39A-204ENST00000586558 STK40Q8N2I9 435 aa19.49■□□□□ 0.71
DDX39A-204ENST00000586558 BBS5Q8N3I7 341 aa19.49■□□□□ 0.71
DDX39A-204ENST00000586558 CCNYQ8ND76 341 aa19.49■□□□□ 0.71
DDX39A-204ENST00000586558 OR2AP1Q8NGE2 309 aa19.49■□□□□ 0.71
DDX39A-204ENST00000586558 PRCCQ92733 491 aaPredicted RBP19.49■□□□□ 0.71
DDX39A-204ENST00000586558 SIPA1Q96FS4 1042 aa19.49■□□□□ 0.71
DDX39A-204ENST00000586558 GDAP1L1Q96MZ0 367 aa19.49■□□□□ 0.71
DDX39A-204ENST00000586558 FAM129BQ96TA1 746 aa19.49■□□□□ 0.71
DDX39A-204ENST00000586558 TNKS2Q9H2K2 1166 aa19.49■□□□□ 0.71
DDX39A-204ENST00000586558 HAUS2Q9NVX0 235 aa19.49■□□□□ 0.71
DDX39A-204ENST00000586558 ZSCAN32Q9NX65 697 aa19.49■□□□□ 0.71
DDX39A-204ENST00000586558 SEPT3Q9UH03 358 aa19.49■□□□□ 0.71
DDX39A-204ENST00000586558 SCML1Q9UN30 329 aa19.49■□□□□ 0.71
DDX39A-204ENST00000586558 HCN4Q9Y3Q4 1203 aa19.49■□□□□ 0.71
DDX39A-204ENST00000586558 PCDHGA2Q9Y5H1 932 aa19.49■□□□□ 0.71
DDX39A-204ENST00000586558 ACTL7AQ9Y615 435 aa19.49■□□□□ 0.71
DDX39A-204ENST00000586558 KCNK3O14649 394 aa19.48■□□□□ 0.71
DDX39A-204ENST00000586558 MATN3O15232 486 aa19.48■□□□□ 0.71
DDX39A-204ENST00000586558 MAP3K6O95382 1288 aa19.48■□□□□ 0.71
DDX39A-204ENST00000586558 IGSF6O95976 241 aa19.48■□□□□ 0.71
DDX39A-204ENST00000586558 PEX11BO96011 259 aa19.48■□□□□ 0.71
DDX39A-204ENST00000586558 ADH1BP00325 375 aa19.48■□□□□ 0.71
DDX39A-204ENST00000586558 RENBPP51606 427 aa19.48■□□□□ 0.71
DDX39A-204ENST00000586558 SFSWAPQ12872 951 aaKnown RBP19.48■□□□□ 0.71
DDX39A-204ENST00000586558 HNRNPDQ14103 355 aaKnown RBP19.48■□□□□ 0.71
DDX39A-204ENST00000586558 LBRQ14739 615 aaKnown RBP19.48■□□□□ 0.71
DDX39A-204ENST00000586558 CYTH1Q15438 398 aa19.48■□□□□ 0.71
DDX39A-204ENST00000586558 NPNTQ6UXI9 565 aa19.48■□□□□ 0.71
DDX39A-204ENST00000586558 PGBD3Q8N328 593 aa19.48■□□□□ 0.71
DDX39A-204ENST00000586558 SLC35F6Q8N357 371 aa19.48■□□□□ 0.71
DDX39A-204ENST00000586558 MAML1Q92585 1016 aa19.48■□□□□ 0.71
DDX39A-204ENST00000586558 PSKH2Q96QS6 385 aa19.48■□□□□ 0.71
DDX39A-204ENST00000586558 CINPQ9BW66 212 aaPredicted RBP19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms