RNA–Protein interactions for RNA: ENST00000586477.1

ATG4D-205, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-205ENST00000586477 MPP6Q9NZW5 540 aa16.47■□□□□ 0.23
ATG4D-205ENST00000586477 THAP10Q9P2Z0 257 aaPredicted RBP16.47■□□□□ 0.23
ATG4D-205ENST00000586477 PI4KAP42356 2102 aa16.46■□□□□ 0.23
ATG4D-205ENST00000586477 CXorf51AA0A1B0GTR3 108 aa16.46■□□□□ 0.23
ATG4D-205ENST00000586477 CEP104O60308 925 aa16.46■□□□□ 0.23
ATG4D-205ENST00000586477 FOXD2O60548 495 aaPredicted RBP16.46■□□□□ 0.23
ATG4D-205ENST00000586477 ALDH1A2O94788 518 aa16.46■□□□□ 0.23
ATG4D-205ENST00000586477 ZNF806P0C7X5 589 aa16.46■□□□□ 0.23
ATG4D-205ENST00000586477 NDUFV2P19404 249 aa16.46■□□□□ 0.23
ATG4D-205ENST00000586477 HLA-FP30511 346 aa16.46■□□□□ 0.23
ATG4D-205ENST00000586477 IL12RB1P42701 662 aa16.46■□□□□ 0.23
ATG4D-205ENST00000586477 MMRN1Q13201 1228 aa16.46■□□□□ 0.23
ATG4D-205ENST00000586477 PAFAH1B3Q15102 231 aaKnown RBP16.46■□□□□ 0.23
ATG4D-205ENST00000586477 ALFQ53S48 1182 aa16.46■□□□□ 0.23
ATG4D-205ENST00000586477 SLC9A4Q6AI14 798 aa16.46■□□□□ 0.23
ATG4D-205ENST00000586477 BBS12Q6ZW61 710 aa16.46■□□□□ 0.23
ATG4D-205ENST00000586477 ANKS1BQ7Z6G8 1248 aa16.46■□□□□ 0.23
ATG4D-205ENST00000586477 TFAP2DQ7Z6R9 452 aa16.46■□□□□ 0.23
ATG4D-205ENST00000586477 CHPFQ8IZ52 775 aa16.46■□□□□ 0.23
ATG4D-205ENST00000586477 PCDH19Q8TAB3 1148 aa16.46■□□□□ 0.23
ATG4D-205ENST00000586477 P3H4Q92791 437 aa16.46■□□□□ 0.23
ATG4D-205ENST00000586477 FERMT1Q9BQL6 677 aa16.46■□□□□ 0.23
ATG4D-205ENST00000586477 BRD8Q9H0E9 1235 aa16.46■□□□□ 0.23
ATG4D-205ENST00000586477 HOMER3Q9NSC5 361 aa16.46■□□□□ 0.23
ATG4D-205ENST00000586477 TTC7AQ9ULT0 858 aaPredicted RBP16.46■□□□□ 0.23
ATG4D-205ENST00000586477 HPCAL4Q9UM19 191 aa16.46■□□□□ 0.23
ATG4D-205ENST00000586477 NEU3Q9UQ49 428 aa16.46■□□□□ 0.23
ATG4D-205ENST00000586477 STON1Q9Y6Q2 735 aa16.46■□□□□ 0.23
ATG4D-205ENST00000586477 DOCK4Q8N1I0 1966 aa16.46■□□□□ 0.22
ATG4D-205ENST00000586477 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.45■□□□□ 0.22
ATG4D-205ENST00000586477 BCLAF3A2AJT9 711 aaKnown RBP16.45■□□□□ 0.22
ATG4D-205ENST00000586477 ARHGAP42A6NI28 874 aa16.45■□□□□ 0.22
ATG4D-205ENST00000586477 CST8O60676 142 aa16.45■□□□□ 0.22
ATG4D-205ENST00000586477 CNTN5O94779 1100 aa16.45■□□□□ 0.22
ATG4D-205ENST00000586477 AMPD1P23109 780 aa16.45■□□□□ 0.22
ATG4D-205ENST00000586477 MPLP40238 635 aa16.45■□□□□ 0.22
ATG4D-205ENST00000586477 PAFAH1B1P43034 410 aa16.45■□□□□ 0.22
ATG4D-205ENST00000586477 GEMIN4P57678 1058 aaKnown RBP16.45■□□□□ 0.22
ATG4D-205ENST00000586477 ZNF211Q13398 564 aaPredicted RBP16.45■□□□□ 0.22
ATG4D-205ENST00000586477 POLD3Q15054 466 aaPredicted RBP16.45■□□□□ 0.22
ATG4D-205ENST00000586477 EIF4HQ15056 248 aaKnown RBP16.45■□□□□ 0.22
ATG4D-205ENST00000586477 DCAF12L1Q5VU92 463 aa16.45■□□□□ 0.22
ATG4D-205ENST00000586477 KAZNQ674X7 775 aa16.45■□□□□ 0.22
ATG4D-205ENST00000586477 TCEAL6Q6IPX3 200 aa16.45■□□□□ 0.22
ATG4D-205ENST00000586477 AHI1Q8N157 1196 aa16.45■□□□□ 0.22
ATG4D-205ENST00000586477 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.45■□□□□ 0.22
ATG4D-205ENST00000586477 NETO1Q8TDF5 533 aa16.45■□□□□ 0.22
ATG4D-205ENST00000586477 TCEAL3Q969E4 200 aa16.45■□□□□ 0.22
ATG4D-205ENST00000586477 PSMB7Q99436 277 aa16.45■□□□□ 0.22
ATG4D-205ENST00000586477 C2orf49Q9BVC5 232 aaPredicted RBP16.45■□□□□ 0.22
ATG4D-205ENST00000586477 MUC3BQ9H195 1237 aa16.45■□□□□ 0.22
ATG4D-205ENST00000586477 HAUS2Q9NVX0 235 aa16.45■□□□□ 0.22
ATG4D-205ENST00000586477 ELOVL2Q9NXB9 296 aa16.45■□□□□ 0.22
ATG4D-205ENST00000586477 BCCIPQ9P287 314 aaKnown RBP eCLIP16.45■□□□□ 0.22
ATG4D-205ENST00000586477 PCDHGA5Q9Y5G8 931 aa16.45■□□□□ 0.22
ATG4D-205ENST00000586477 GOLGA6L10A0A0M3HER8 536 aa16.44■□□□□ 0.22
ATG4D-205ENST00000586477 DCDC2BA2VCK2 349 aa16.44■□□□□ 0.22
ATG4D-205ENST00000586477 ZSCAN5CA6NGD5 496 aaPredicted RBP16.44■□□□□ 0.22
ATG4D-205ENST00000586477 APOC4-APOC2K7ER74 178 aa16.44■□□□□ 0.22
ATG4D-205ENST00000586477 PGRMC1O00264 195 aaKnown RBP16.44■□□□□ 0.22
ATG4D-205ENST00000586477 PPP1R12AO14974 1030 aaPredicted RBP16.44■□□□□ 0.22
ATG4D-205ENST00000586477 TIMM44O43615 452 aa16.44■□□□□ 0.22
ATG4D-205ENST00000586477 RHOBTB1O94844 696 aa16.44■□□□□ 0.22
ATG4D-205ENST00000586477 APOC2P02655 101 aa16.44■□□□□ 0.22
ATG4D-205ENST00000586477 PRKCHP24723 683 aa16.44■□□□□ 0.22
ATG4D-205ENST00000586477 PLK1P53350 603 aa16.44■□□□□ 0.22
ATG4D-205ENST00000586477 GNA12Q03113 381 aa16.44■□□□□ 0.22
ATG4D-205ENST00000586477 SULT2A1Q06520 285 aa16.44■□□□□ 0.22
ATG4D-205ENST00000586477 ZNF33AQ06730 810 aa16.44■□□□□ 0.22
ATG4D-205ENST00000586477 ZNF234Q14588 700 aa16.44■□□□□ 0.22
ATG4D-205ENST00000586477 ELF2Q15723 593 aa16.44■□□□□ 0.22
ATG4D-205ENST00000586477 NCBP2-AS2Q69YL0 99 aa16.44■□□□□ 0.22
ATG4D-205ENST00000586477 METTL3Q86U44 580 aaKnown RBP16.44■□□□□ 0.22
ATG4D-205ENST00000586477 ADIPOR2Q86V24 386 aa16.44■□□□□ 0.22
ATG4D-205ENST00000586477 CIR1Q86X95 450 aaPredicted RBP16.44■□□□□ 0.22
ATG4D-205ENST00000586477 SLC13A5Q86YT5 568 aaPredicted RBP16.44■□□□□ 0.22
ATG4D-205ENST00000586477 ACTRT1Q8TDG2 376 aa16.44■□□□□ 0.22
ATG4D-205ENST00000586477 HAUS1Q96CS2 278 aa16.44■□□□□ 0.22
ATG4D-205ENST00000586477 MAGEB5Q9BZ81 275 aa16.44■□□□□ 0.22
ATG4D-205ENST00000586477 ZNF212Q9UDV6 495 aa16.44■□□□□ 0.22
ATG4D-205ENST00000586477 GGA2Q9UJY4 613 aa16.44■□□□□ 0.22
ATG4D-205ENST00000586477 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.43■□□□□ 0.22
ATG4D-205ENST00000586477 ATP5BP06576 529 aaKnown RBP16.43■□□□□ 0.22
ATG4D-205ENST00000586477 PABPC1P11940 636 aaKnown RBP16.43■□□□□ 0.22
ATG4D-205ENST00000586477 KRT10P13645 584 aa16.43■□□□□ 0.22
ATG4D-205ENST00000586477 CXCR5P32302 372 aa16.43■□□□□ 0.22
ATG4D-205ENST00000586477 CD70P32970 193 aa16.43■□□□□ 0.22
ATG4D-205ENST00000586477 PTGER3P43115 390 aa16.43■□□□□ 0.22
ATG4D-205ENST00000586477 DYNLT1P63172 113 aa16.43■□□□□ 0.22
ATG4D-205ENST00000586477 PDK1Q15118 436 aa16.43■□□□□ 0.22
ATG4D-205ENST00000586477 LONRF2Q1L5Z9 754 aa16.43■□□□□ 0.22
ATG4D-205ENST00000586477 FUT11Q495W5 492 aa16.43■□□□□ 0.22
ATG4D-205ENST00000586477 TMCO4Q5TGY1 634 aa16.43■□□□□ 0.22
ATG4D-205ENST00000586477 CXorf57Q6NSI4 855 aaKnown RBP16.43■□□□□ 0.22
ATG4D-205ENST00000586477 ZNF354CQ86Y25 554 aa16.43■□□□□ 0.22
ATG4D-205ENST00000586477 TMEFF1Q8IYR6 380 aa16.43■□□□□ 0.22
ATG4D-205ENST00000586477 PGBD3Q8N328 593 aa16.43■□□□□ 0.22
ATG4D-205ENST00000586477 RASGEF1CQ8N431 466 aa16.43■□□□□ 0.22
ATG4D-205ENST00000586477 PQLC3Q8N755 202 aa16.43■□□□□ 0.22
ATG4D-205ENST00000586477 PLD5Q8N7P1 536 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms