RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 ZC3H7BQ9UGR2 993 aaKnown RBP20.84■□□□□ 0.93
ATG4D-204ENST00000586417 SLC24A2Q9UI40 661 aa20.84■□□□□ 0.93
ATG4D-204ENST00000586417 DOCK8Q8NF50 2099 aa20.83■□□□□ 0.93
ATG4D-204ENST00000586417 CORO1AP31146 461 aaKnown RBP20.83■□□□□ 0.93
ATG4D-204ENST00000586417 MAPKAPK2P49137 400 aa20.83■□□□□ 0.93
ATG4D-204ENST00000586417 SPARCL1Q14515 664 aa20.83■□□□□ 0.93
ATG4D-204ENST00000586417 SKIV2LQ15477 1246 aaKnown RBP20.83■□□□□ 0.93
ATG4D-204ENST00000586417 ATAT1Q5SQI0 421 aa20.83■□□□□ 0.93
ATG4D-204ENST00000586417 CMTM8Q8IZV2 173 aa20.83■□□□□ 0.93
ATG4D-204ENST00000586417 SMRP1Q8NCR6 262 aa20.83■□□□□ 0.93
ATG4D-204ENST00000586417 ADAMTS19Q8TE59 1207 aa20.83■□□□□ 0.93
ATG4D-204ENST00000586417 CFAP36Q96G28 342 aa20.83■□□□□ 0.93
ATG4D-204ENST00000586417 CCL26Q9Y258 94 aa20.83■□□□□ 0.93
ATG4D-204ENST00000586417 TTLL3Q9Y4R7 772 aa20.83■□□□□ 0.93
ATG4D-204ENST00000586417 CPQQ9Y646 472 aa20.83■□□□□ 0.93
ATG4D-204ENST00000586417 HELZP42694 1942 aaKnown RBP20.83■□□□□ 0.92
ATG4D-204ENST00000586417 TRAV19A0A0A6YYK7 116 aa20.82■□□□□ 0.92
ATG4D-204ENST00000586417 ERI2A8K979 691 aaKnown RBP20.82■□□□□ 0.92
ATG4D-204ENST00000586417 POC1B-GALNT4F8VUJ3 575 aa20.82■□□□□ 0.92
ATG4D-204ENST00000586417 CPP00450 1065 aa20.82■□□□□ 0.92
ATG4D-204ENST00000586417 IRF1P10914 325 aa20.82■□□□□ 0.92
ATG4D-204ENST00000586417 OLIG2Q13516 323 aa20.82■□□□□ 0.92
ATG4D-204ENST00000586417 KLHL38Q2WGJ6 581 aa20.82■□□□□ 0.92
ATG4D-204ENST00000586417 ARHGAP15Q53QZ3 475 aa20.82■□□□□ 0.92
ATG4D-204ENST00000586417 GET4Q7L5D6 327 aaPredicted RBP20.82■□□□□ 0.92
ATG4D-204ENST00000586417 OTOP3Q7RTS5 596 aa20.82■□□□□ 0.92
ATG4D-204ENST00000586417 ARHGEF2Q92974 986 aaKnown RBP20.82■□□□□ 0.92
ATG4D-204ENST00000586417 OXNAD1Q96HP4 312 aaPredicted RBP20.82■□□□□ 0.92
ATG4D-204ENST00000586417 PRICKLE1Q96MT3 831 aaPredicted RBP20.82■□□□□ 0.92
ATG4D-204ENST00000586417 CAPS2Q9BXY5 557 aa20.82■□□□□ 0.92
ATG4D-204ENST00000586417 TBK1Q9UHD2 729 aa20.82■□□□□ 0.92
ATG4D-204ENST00000586417 FOXO6A8MYZ6 492 aa20.82■□□□□ 0.92
ATG4D-204ENST00000586417 SCAMP3O14828 347 aaKnown RBP20.82■□□□□ 0.92
ATG4D-204ENST00000586417 KCNA5P22460 613 aa20.82■□□□□ 0.92
ATG4D-204ENST00000586417 GEMIN4P57678 1058 aaKnown RBP20.82■□□□□ 0.92
ATG4D-204ENST00000586417 UNC5AQ6ZN44 842 aa20.82■□□□□ 0.92
ATG4D-204ENST00000586417 NPAS3Q8IXF0 933 aa20.82■□□□□ 0.92
ATG4D-204ENST00000586417 CFAP52Q8N1V2 620 aa20.82■□□□□ 0.92
ATG4D-204ENST00000586417 TTC16Q8NEE8 873 aa20.82■□□□□ 0.92
ATG4D-204ENST00000586417 FGF13Q92913 245 aa20.82■□□□□ 0.92
ATG4D-204ENST00000586417 TRIM56Q9BRZ2 755 aaKnown RBP20.82■□□□□ 0.92
ATG4D-204ENST00000586417 PIH1D1Q9NWS0 290 aaKnown RBP20.82■□□□□ 0.92
ATG4D-204ENST00000586417 AGO1Q9UL18 857 aaKnown RBP20.82■□□□□ 0.92
ATG4D-204ENST00000586417 CHD5Q8TDI0 1954 aa20.81■□□□□ 0.92
ATG4D-204ENST00000586417 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.81■□□□□ 0.92
ATG4D-204ENST00000586417 J3KR12 359 aa20.81■□□□□ 0.92
ATG4D-204ENST00000586417 RAMP2O60895 175 aa20.81■□□□□ 0.92
ATG4D-204ENST00000586417 PIAS1O75925 651 aa20.81■□□□□ 0.92
ATG4D-204ENST00000586417 PRAMEF12O95522 483 aa20.81■□□□□ 0.92
ATG4D-204ENST00000586417 HLA-DQB2P05538 268 aa20.81■□□□□ 0.92
ATG4D-204ENST00000586417 GSTA2P09210 222 aa20.81■□□□□ 0.92
ATG4D-204ENST00000586417 ATP5DP30049 168 aa20.81■□□□□ 0.92
ATG4D-204ENST00000586417 SLC7A9P82251 487 aa20.81■□□□□ 0.92
ATG4D-204ENST00000586417 PARP15Q460N3 678 aa20.81■□□□□ 0.92
ATG4D-204ENST00000586417 ST13P5Q8NFI4 369 aaPredicted RBP20.81■□□□□ 0.92
ATG4D-204ENST00000586417 RIN3Q8TB24 985 aa20.81■□□□□ 0.92
ATG4D-204ENST00000586417 FCRL5Q96RD9 977 aa20.81■□□□□ 0.92
ATG4D-204ENST00000586417 CYTH2Q99418 400 aa20.81■□□□□ 0.92
ATG4D-204ENST00000586417 POMKQ9H5K3 350 aa20.81■□□□□ 0.92
ATG4D-204ENST00000586417 RETREG1Q9H6L5 497 aa20.81■□□□□ 0.92
ATG4D-204ENST00000586417 UBE2ZQ9H832 354 aaPredicted RBP20.81■□□□□ 0.92
ATG4D-204ENST00000586417 GLOD4Q9HC38 313 aa20.81■□□□□ 0.92
ATG4D-204ENST00000586417 CASS4Q9NQ75 786 aa20.81■□□□□ 0.92
ATG4D-204ENST00000586417 CD207Q9UJ71 328 aa20.81■□□□□ 0.92
ATG4D-204ENST00000586417 MAD1L1Q9Y6D9 718 aa20.81■□□□□ 0.92
ATG4D-204ENST00000586417 DENND4AQ7Z401 1863 aa20.81■□□□□ 0.92
ATG4D-204ENST00000586417 SDR42E2A6NKP2 422 aa20.8■□□□□ 0.92
ATG4D-204ENST00000586417 GREM1O60565 184 aa20.8■□□□□ 0.92
ATG4D-204ENST00000586417 DDX6P26196 483 aaKnown RBP eCLIP20.8■□□□□ 0.927e-8■■□□□ 12.4
ATG4D-204ENST00000586417 MGAT1P26572 445 aa20.8■□□□□ 0.92
ATG4D-204ENST00000586417 OR1E1P30953 314 aa20.8■□□□□ 0.92
ATG4D-204ENST00000586417 AVPR1AP37288 418 aa20.8■□□□□ 0.92
ATG4D-204ENST00000586417 MDH1P40925 334 aaKnown RBP20.8■□□□□ 0.92
ATG4D-204ENST00000586417 IFNAR2P48551 515 aa20.8■□□□□ 0.92
ATG4D-204ENST00000586417 SESN2P58004 480 aaPredicted RBP20.8■□□□□ 0.92
ATG4D-204ENST00000586417 YBEYP58557 167 aaPredicted RBP20.8■□□□□ 0.92
ATG4D-204ENST00000586417 GUCY1A3Q02108 690 aa20.8■□□□□ 0.92
ATG4D-204ENST00000586417 TMED2Q15363 201 aa20.8■□□□□ 0.92
ATG4D-204ENST00000586417 ANO4Q32M45 955 aa20.8■□□□□ 0.92
ATG4D-204ENST00000586417 STEAP4Q687X5 459 aa20.8■□□□□ 0.92
ATG4D-204ENST00000586417 PRPF39Q86UA1 669 aaKnown RBP20.8■□□□□ 0.92
ATG4D-204ENST00000586417 OR52K1Q8NGK4 314 aa20.8■□□□□ 0.92
ATG4D-204ENST00000586417 USP13Q92995 863 aaPredicted RBP20.8■□□□□ 0.92
ATG4D-204ENST00000586417 PAFAH2Q99487 392 aa20.8■□□□□ 0.92
ATG4D-204ENST00000586417 RBM22Q9NW64 420 aaKnown RBP eCLIP20.8■□□□□ 0.92
ATG4D-204ENST00000586417 PSMC3IPQ9P2W1 217 aaPredicted RBP20.8■□□□□ 0.92
ATG4D-204ENST00000586417 STOML2Q9UJZ1 356 aa20.8■□□□□ 0.92
ATG4D-204ENST00000586417 USP15Q9Y4E8 981 aaPredicted RBP20.8■□□□□ 0.92
ATG4D-204ENST00000586417 ZFP37Q9Y6Q3 630 aaPredicted RBP20.8■□□□□ 0.92
ATG4D-204ENST00000586417 USP12O75317 370 aa20.8■□□□□ 0.92
ATG4D-204ENST00000586417 CREB1P16220 341 aa20.8■□□□□ 0.92
ATG4D-204ENST00000586417 PRKCHP24723 683 aa20.8■□□□□ 0.92
ATG4D-204ENST00000586417 STX2P32856 288 aa20.8■□□□□ 0.92
ATG4D-204ENST00000586417 RPS24P62847 133 aaKnown RBP20.8■□□□□ 0.92
ATG4D-204ENST00000586417 SERINC3Q13530 473 aa20.8■□□□□ 0.92
ATG4D-204ENST00000586417 HNRNPDQ14103 355 aaKnown RBP20.8■□□□□ 0.92
ATG4D-204ENST00000586417 POLD3Q15054 466 aaPredicted RBP20.8■□□□□ 0.92
ATG4D-204ENST00000586417 KBTBD12Q3ZCT8 623 aa20.8■□□□□ 0.92
ATG4D-204ENST00000586417 ADGRF1Q5T601 910 aa20.8■□□□□ 0.92
ATG4D-204ENST00000586417 TTC19Q6DKK2 380 aaPredicted RBP20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms